RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.09
RNU4-28P-201ENST00000364739 SOX17Q9H6I2 414 aaPredicted RBP8.27□□□□□ -1.09
RNU4-28P-201ENST00000364739 B3GALT4O96024 378 aa8.26□□□□□ -1.09
RNU4-28P-201ENST00000364739 MAOBP27338 520 aa8.26□□□□□ -1.09
RNU4-28P-201ENST00000364739 Q6ZS46 218 aa8.26□□□□□ -1.09
RNU4-28P-201ENST00000364739 NBPF11Q86T75 865 aa8.26□□□□□ -1.09
RNU4-28P-201ENST00000364739 TRIM56Q9BRZ2 755 aaKnown RBP8.26□□□□□ -1.09
RNU4-28P-201ENST00000364739 NRSN2Q9GZP1 204 aa8.26□□□□□ -1.09
RNU4-28P-201ENST00000364739 PPP4R2Q9NY27 417 aa8.26□□□□□ -1.09
RNU4-28P-201ENST00000364739 DRD2P14416 443 aa8.25□□□□□ -1.09
RNU4-28P-201ENST00000364739 ATP2B2Q01814 1243 aa8.25□□□□□ -1.09
RNU4-28P-201ENST00000364739 ALG1LQ6GMV1 187 aa8.25□□□□□ -1.09
RNU4-28P-201ENST00000364739 ARMC10Q8N2F6 343 aa8.25□□□□□ -1.09
RNU4-28P-201ENST00000364739 ZC3H12CQ9C0D7 883 aaKnown RBP8.25□□□□□ -1.09
RNU4-28P-201ENST00000364739 PREPP48147 710 aa8.24□□□□□ -1.09
RNU4-28P-201ENST00000364739 PTPN12Q05209 780 aaKnown RBP8.24□□□□□ -1.09
RNU4-28P-201ENST00000364739 LRP8Q14114 963 aa8.24□□□□□ -1.09
RNU4-28P-201ENST00000364739 POU4F3Q15319 338 aa8.24□□□□□ -1.09
RNU4-28P-201ENST00000364739 C12orf50Q8NA57 414 aaPredicted RBP8.24□□□□□ -1.09
RNU4-28P-201ENST00000364739 KRTAP4-12Q9BQ66 201 aa8.24□□□□□ -1.09
RNU4-28P-201ENST00000364739 RNF208Q9H0X6 261 aa8.24□□□□□ -1.09
RNU4-28P-201ENST00000364739 FBXO24O75426 580 aa8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 TAGLNQ01995 201 aaKnown RBP8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 EXOSC6Q5RKV6 272 aaKnown RBP8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 NPAS4Q8IUM7 802 aa8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 HOMEZQ8IX15 550 aa8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 C3orf58Q8NDZ4 430 aa8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 FBF1Q8TES7 1133 aa8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 TMPRSS13Q9BYE2 586 aa8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 GPN3Q9UHW5 284 aaPredicted RBP8.23□□□□□ -1.09
RNU4-28P-201ENST00000364739 SART1O43290 800 aaKnown RBP8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 CYP11A1P05108 521 aa8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 CCDC27Q2M243 656 aa8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 FDX2Q6P4F2 183 aa8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 PRR23CQ6ZRP0 262 aa8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 STK35Q8TDR2 534 aa8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 FAM46AQ96IP4 442 aaKnown RBP8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 DUSP9Q99956 384 aaKnown RBP8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 CEP41Q9BYV8 373 aa8.22□□□□□ -1.09
RNU4-28P-201ENST00000364739 MEGF11A6BM72 1044 aa8.21□□□□□ -1.1
RNU4-28P-201ENST00000364739 RPS26P11Q5JNZ5 115 aaPredicted RBP8.21□□□□□ -1.1
RNU4-28P-201ENST00000364739 LCE3BQ5TA77 95 aa8.21□□□□□ -1.1
RNU4-28P-201ENST00000364739 TPTE2Q6XPS3 522 aa8.21□□□□□ -1.1
RNU4-28P-201ENST00000364739 UTP4Q969X6 686 aaKnown RBP8.21□□□□□ -1.1
RNU4-28P-201ENST00000364739 CORO1BQ9BR76 489 aa8.21□□□□□ -1.1
RNU4-28P-201ENST00000364739 ANKRD34AQ69YU3 496 aa8.2□□□□□ -1.1
RNU4-28P-201ENST00000364739 DDX54Q8TDD1 881 aaKnown RBP8.2□□□□□ -1.1
RNU4-28P-201ENST00000364739 WDR89Q96FK6 387 aaPredicted RBP8.2□□□□□ -1.1
RNU4-28P-201ENST00000364739 FAM161BQ96MY7 647 aa8.2□□□□□ -1.1
RNU4-28P-201ENST00000364739 SPG7Q9UQ90 795 aa8.2□□□□□ -1.1
RNU4-28P-201ENST00000364739 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 BMP3P12645 472 aa8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 LIG1P18858 919 aa8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 GSTT1P30711 240 aa8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 AKAP4Q5JQC9 854 aa8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 SMG8Q8ND04 991 aaKnown RBP8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 C12orf49Q9H741 205 aa8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 CYP4F12Q9HCS2 524 aa8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 RAD18Q9NS91 495 aa8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
RNU4-28P-201ENST00000364739 HMX2A2RU54 273 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 DHX15O43143 795 aaKnown RBP8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 PAGE1O75459 146 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 USP17L7P0C7H9 530 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 XRCC5P13010 732 aaKnown RBP8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 PDE3AQ14432 1141 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 SGO2Q562F6 1265 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 MYRFLQ96LU7 910 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 KCNF1Q9H3M0 494 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 CCDC86Q9H6F5 360 aaKnown RBP8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 STOML1Q9UBI4 398 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 RAXQ9Y2V3 346 aa8.18□□□□□ -1.1
RNU4-28P-201ENST00000364739 ZBTB7CA1YPR0 619 aa8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 HYAL3O43820 417 aaPredicted RBP8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 GAS2O43903 313 aaKnown RBP8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 TIAF1O95411 115 aa8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 SOX4Q06945 474 aaPredicted RBP8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 MPRIPQ6WCQ1 1025 aa8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 FAM20CQ8IXL6 584 aa8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 SUGCTQ9HAC7 445 aa8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 PARP2Q9UGN5 583 aa8.17□□□□□ -1.1
RNU4-28P-201ENST00000364739 GNA15P30679 374 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 PPP2R3AQ06190 1150 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 AP3B2Q13367 1082 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 CDPF1Q6NVV7 123 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 FBXO33Q7Z6M2 555 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 SULF2Q8IWU5 870 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 C2CD4AQ8NCU7 369 aaPredicted RBP8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 GRIN3AQ8TCU5 1115 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 KCNB2Q92953 911 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 ZFYVE1Q9HBF4 777 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 FAM8A1Q9UBU6 413 aa8.16□□□□□ -1.1
RNU4-28P-201ENST00000364739 ENC1O14682 589 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 GIPC1O14908 333 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 ZNF862O60290 1169 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms