RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 RNF113AO15541 343 aaKnown RBP13.03□□□□□ -0.32
SNX6-201ENST00000362031 ADD2P35612 726 aa13.03□□□□□ -0.32
SNX6-201ENST00000362031 SCNN1DP51172 638 aa13.03□□□□□ -0.32
SNX6-201ENST00000362031 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
SNX6-201ENST00000362031 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
SNX6-201ENST00000362031 KIAA0825Q8IV33 1275 aa13.03□□□□□ -0.32
SNX6-201ENST00000362031 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
SNX6-201ENST00000362031 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
SNX6-201ENST00000362031 LDHBP07195 334 aaKnown RBP13.02□□□□□ -0.33
SNX6-201ENST00000362031 ZNF589Q86UQ0 364 aaPredicted RBP13.02□□□□□ -0.33
SNX6-201ENST00000362031 MYH7P12883 1935 aa13.02□□□□□ -0.33
SNX6-201ENST00000362031 M0R2C6 588 aa13.01□□□□□ -0.33
SNX6-201ENST00000362031 CDC45O75419 566 aa13.01□□□□□ -0.33
SNX6-201ENST00000362031 CIAPIN1Q6FI81 312 aa13.01□□□□□ -0.33
SNX6-201ENST00000362031 RSBN1LQ6PCB5 846 aaPredicted RBP13.01□□□□□ -0.33
SNX6-201ENST00000362031 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
SNX6-201ENST00000362031 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
SNX6-201ENST00000362031 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
SNX6-201ENST00000362031 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
SNX6-201ENST00000362031 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
SNX6-201ENST00000362031 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
SNX6-201ENST00000362031 MAST3O60307 1309 aa13□□□□□ -0.33
SNX6-201ENST00000362031 EGFRP00533 1210 aa13□□□□□ -0.33
SNX6-201ENST00000362031 CYP7A1P22680 504 aa13□□□□□ -0.33
SNX6-201ENST00000362031 TIAM2Q8IVF5 1701 aa13□□□□□ -0.33
SNX6-201ENST00000362031 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
SNX6-201ENST00000362031 DYNLL1P63167 89 aaKnown RBP13□□□□□ -0.33
SNX6-201ENST00000362031 UBE3CQ15386 1083 aa13□□□□□ -0.33
SNX6-201ENST00000362031 NAA16Q6N069 864 aaPredicted RBP13□□□□□ -0.33
SNX6-201ENST00000362031 DZIP1Q86YF9 867 aaKnown RBP13□□□□□ -0.33
SNX6-201ENST00000362031 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
SNX6-201ENST00000362031 FOXP2O15409 715 aa12.99□□□□□ -0.33
SNX6-201ENST00000362031 GMPSP49915 693 aaPredicted RBP12.99□□□□□ -0.33
SNX6-201ENST00000362031 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
SNX6-201ENST00000362031 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
SNX6-201ENST00000362031 ZGPATQ8N5A5 531 aaKnown RBP12.99□□□□□ -0.33
SNX6-201ENST00000362031 ESYT1Q9BSJ8 1104 aa12.99□□□□□ -0.33
SNX6-201ENST00000362031 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNX6-201ENST00000362031 MYH2Q9UKX2 1941 aa12.99□□□□□ -0.33
SNX6-201ENST00000362031 RFX7Q2KHR2 1363 aa12.98□□□□□ -0.33
SNX6-201ENST00000362031 SGSM2O43147 1006 aa12.98□□□□□ -0.33
SNX6-201ENST00000362031 EIF6P56537 245 aaKnown RBP12.98□□□□□ -0.33
SNX6-201ENST00000362031 SPTY2D1Q68D10 685 aaPredicted RBP12.98□□□□□ -0.33
SNX6-201ENST00000362031 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
SNX6-201ENST00000362031 APPBP2Q92624 585 aa12.98□□□□□ -0.33
SNX6-201ENST00000362031 RIOK1Q9BRS2 568 aaKnown RBP12.98□□□□□ -0.33
SNX6-201ENST00000362031 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
SNX6-201ENST00000362031 DAGLAQ9Y4D2 1042 aa12.98□□□□□ -0.33
SNX6-201ENST00000362031 PRKAB2O43741 272 aa12.98□□□□□ -0.33
SNX6-201ENST00000362031 ARMT1Q9H993 441 aa12.98□□□□□ -0.33
SNX6-201ENST00000362031 AATFQ9NY61 560 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNX6-201ENST00000362031 MBD4O95243 580 aa12.97□□□□□ -0.33
SNX6-201ENST00000362031 ZFYP08048 801 aaPredicted RBP12.97□□□□□ -0.33
SNX6-201ENST00000362031 PTH1RQ03431 593 aa12.97□□□□□ -0.33
SNX6-201ENST00000362031 TNIP1Q15025 636 aa12.97□□□□□ -0.33
SNX6-201ENST00000362031 MCMDC2Q4G0Z9 681 aa12.97□□□□□ -0.33
SNX6-201ENST00000362031 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
SNX6-201ENST00000362031 SUGT1Q9Y2Z0 365 aa12.97□□□□□ -0.33
SNX6-201ENST00000362031 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
SNX6-201ENST00000362031 GAKO14976 1311 aa12.97□□□□□ -0.33
SNX6-201ENST00000362031 GPAA1O43292 621 aa12.96□□□□□ -0.33
SNX6-201ENST00000362031 CRKP46108 304 aa12.96□□□□□ -0.33
SNX6-201ENST00000362031 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.33
SNX6-201ENST00000362031 PRMT6Q96LA8 375 aaPredicted RBP12.96□□□□□ -0.33
SNX6-201ENST00000362031 STRBPQ96SI9 672 aaKnown RBP12.96□□□□□ -0.33
SNX6-201ENST00000362031 MAST2Q6P0Q8 1798 aa12.96□□□□□ -0.33
SNX6-201ENST00000362031 USP17L8P0C7I0 530 aa12.96□□□□□ -0.34
SNX6-201ENST00000362031 EPS15P42566 896 aa12.96□□□□□ -0.34
SNX6-201ENST00000362031 ZSCAN25Q6NSZ9 544 aa12.96□□□□□ -0.34
SNX6-201ENST00000362031 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.34
SNX6-201ENST00000362031 GPC2Q8N158 579 aa12.96□□□□□ -0.34
SNX6-201ENST00000362031 SH3RF3Q8TEJ3 882 aaPredicted RBP12.96□□□□□ -0.34
SNX6-201ENST00000362031 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.34
SNX6-201ENST00000362031 HELLSQ9NRZ9 838 aa12.96□□□□□ -0.34
SNX6-201ENST00000362031 GPR75-ASB3A0A0A6YYF3 556 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 SMIM22K7EJ46 135 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 BTDP43251 543 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 RHBDL3P58872 404 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 LSG1Q9H089 658 aaKnown RBP12.95□□□□□ -0.34
SNX6-201ENST00000362031 CNOT7Q9UIV1 285 aaKnown RBP12.95□□□□□ -0.34
SNX6-201ENST00000362031 ASTN2O75129 1339 aaPredicted RBP12.95□□□□□ -0.34
SNX6-201ENST00000362031 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 HIP1O00291 1037 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 CACNB3P54284 484 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
SNX6-201ENST00000362031 EVX2Q03828 476 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 SERPINA10Q9UK55 444 aa12.95□□□□□ -0.34
SNX6-201ENST00000362031 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
SNX6-201ENST00000362031 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
SNX6-201ENST00000362031 MYO3BQ8WXR4 1341 aa12.94□□□□□ -0.34
SNX6-201ENST00000362031 POTECB2RU33 542 aa12.94□□□□□ -0.34
SNX6-201ENST00000362031 RBM5P52756 815 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNX6-201ENST00000362031 ZNF280AP59817 542 aaPredicted RBP12.94□□□□□ -0.34
SNX6-201ENST00000362031 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
SNX6-201ENST00000362031 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
SNX6-201ENST00000362031 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
SNX6-201ENST00000362031 SDR42E1Q8WUS8 393 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms