RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 ARMC9Q7Z3E5 817 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 CNNM3Q8NE01 707 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 NGDNQ8NEJ9 315 aaKnown RBP10.39□□□□□ -0.75
CALD1-201ENST00000361675 HELBQ8NG08 1087 aaPredicted RBP10.39□□□□□ -0.75
CALD1-201ENST00000361675 CCDC85AQ96PX6 553 aaPredicted RBP10.39□□□□□ -0.75
CALD1-201ENST00000361675 SRCIN1Q9C0H9 1055 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 CD248Q9HCU0 757 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 BDNFP23560 247 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 SMARCC1Q92922 1105 aaPredicted RBP10.39□□□□□ -0.75
CALD1-201ENST00000361675 MIEF2Q96C03 454 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 TMEM165Q9HC07 324 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 DIP2AQ14689 1571 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 PPARDQ03181 441 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 DNM1Q05193 864 aaKnown RBP10.39□□□□□ -0.75
CALD1-201ENST00000361675 NUP133Q8WUM0 1156 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 RILPL2Q969X0 211 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 RANBP17Q9H2T7 1088 aaKnown RBP10.39□□□□□ -0.75
CALD1-201ENST00000361675 KIF9Q9HAQ2 790 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 H2AFXP16104 143 aaPredicted RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 TRDNQ13061 729 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 MTHFSDQ2M296 383 aaKnown RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 ALDH1L2Q3SY69 923 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 SUGP1Q8IWZ8 645 aaKnown RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 THEMISQ8N1K5 641 aaPredicted RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 ORC3Q9UBD5 711 aaPredicted RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 USP31Q70CQ4 1352 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 SRGAP3O43295 1099 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 SASH3O75995 380 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 GSCP56915 257 aaPredicted RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 GNAI1P63096 354 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 LRRC8AQ8IWT6 810 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 MKRN1Q9UHC7 482 aaKnown RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 EIF5P55010 431 aaKnown RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 IRX1P78414 480 aaPredicted RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 SCRN1Q12765 414 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 TRIM29Q14134 588 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 SWT1Q5T5J6 900 aaKnown RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 EYA1Q99502 592 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 FAM107BQ9H098 131 aa10.38□□□□□ -0.75
CALD1-201ENST00000361675 CEP170BQ9Y4F5 1589 aaPredicted RBP10.38□□□□□ -0.75
CALD1-201ENST00000361675 KIF3CO14782 793 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 ATP2C2O75185 946 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 TEX11Q8IYF3 940 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 COQ9O75208 318 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 SFPQP23246 707 aaKnown RBP eCLIP10.37□□□□□ -0.75
CALD1-201ENST00000361675 TOMM20Q15388 145 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 FKBP15Q5T1M5 1219 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 REXO1L1PQ8IX06 675 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 C16orf71Q8IYS4 520 aaPredicted RBP10.37□□□□□ -0.75
CALD1-201ENST00000361675 GPATCH3Q96I76 525 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 TFIP11Q9UBB9 837 aaKnown RBP10.37□□□□□ -0.75
CALD1-201ENST00000361675 RANBP1P43487 201 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 NLRP6P59044 892 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 ARMC2Q8NEN0 867 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 DACT1Q9NYF0 836 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 HDAC9Q9UKV0 1011 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 NALCNQ8IZF0 1738 aa10.37□□□□□ -0.75
CALD1-201ENST00000361675 PIK3C2AO00443 1686 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 H3BQF6 201 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 N4BP1O75113 896 aaKnown RBP10.36□□□□□ -0.75
CALD1-201ENST00000361675 AKNAD1Q5T1N1 836 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 FAM173BQ6P4H8 233 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 USHBP1Q8N6Y0 703 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 LTV1Q96GA3 475 aaPredicted RBP10.36□□□□□ -0.75
CALD1-201ENST00000361675 DNAI2Q9GZS0 605 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 SAMM50Q9Y512 469 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 A0A087WWV3 80 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 CCNHP51946 323 aaPredicted RBP10.36□□□□□ -0.75
CALD1-201ENST00000361675 GNG11P61952 73 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 PPP2R3AQ06190 1150 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 C10orf62Q5T681 223 aaPredicted RBP10.36□□□□□ -0.75
CALD1-201ENST00000361675 TMC6Q7Z403 805 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 GDAP1L1Q96MZ0 367 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 ZSCAN16Q9H4T2 348 aaPredicted RBP10.36□□□□□ -0.75
CALD1-201ENST00000361675 RGPD1P0DJD0 1748 aa10.36□□□□□ -0.75
CALD1-201ENST00000361675 KLHL33A6NCF5 533 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 RHOXF2BP0C7M4 288 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 PRPF4BQ13523 1007 aaKnown RBP10.35□□□□□ -0.75
CALD1-201ENST00000361675 LONRF2Q1L5Z9 754 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 SAPCD2Q86UD0 394 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 SPDL1Q96EA4 605 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 RHOXF2Q9BQY4 288 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 FAM204AQ9H8W3 233 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 IP6K2Q9UHH9 426 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 PTCH1Q13635 1447 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 VIRMAQ69YN4 1812 aaKnown RBP10.35□□□□□ -0.75
CALD1-201ENST00000361675 CHL1O00533 1208 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 PPP1R12BO60237 982 aaPredicted RBP10.35□□□□□ -0.75
CALD1-201ENST00000361675 TBC1D8O95759 1140 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 EZRP15311 586 aaKnown RBP10.35□□□□□ -0.75
CALD1-201ENST00000361675 IQCA1Q86XH1 822 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 PARD3BQ8TEW8 1205 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 NOC3LQ8WTT2 800 aaKnown RBP10.35□□□□□ -0.75
CALD1-201ENST00000361675 SH3GL3Q99963 347 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 CDCA7Q9BWT1 371 aaPredicted RBP10.35□□□□□ -0.75
CALD1-201ENST00000361675 CCDC92Q53HC0 331 aaPredicted RBP10.35□□□□□ -0.75
CALD1-201ENST00000361675 CABS1Q96KC9 395 aa10.35□□□□□ -0.75
CALD1-201ENST00000361675 NAT10Q9H0A0 1025 aaKnown RBP10.35□□□□□ -0.75
CALD1-201ENST00000361675 RSPH9Q9H1X1 276 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms