RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 SYNCQ9H7C4 482 aa23.32■■□□□ 1.32
NCKAP1-201ENST00000360982 MAP3K9P80192 1104 aa23.32■■□□□ 1.32
NCKAP1-201ENST00000360982 DNMT1P26358 1616 aaKnown RBP23.32■■□□□ 1.32
NCKAP1-201ENST00000360982 G2E3Q7L622 706 aa23.32■■□□□ 1.32
NCKAP1-201ENST00000360982 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.32■■□□□ 1.321e-6■■□□□ 12.4
NCKAP1-201ENST00000360982 BACH1O14867 736 aa23.31■■□□□ 1.32
NCKAP1-201ENST00000360982 DNA2P51530 1060 aa23.31■■□□□ 1.32
NCKAP1-201ENST00000360982 TMEM87BQ96K49 555 aa23.31■■□□□ 1.32
NCKAP1-201ENST00000360982 LTKP29376 864 aa23.31■■□□□ 1.32
NCKAP1-201ENST00000360982 FAM13AO94988 1023 aa23.31■■□□□ 1.32
NCKAP1-201ENST00000360982 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.31■■□□□ 1.322e-6■■□□□ 12.6
NCKAP1-201ENST00000360982 CHMLP26374 656 aa23.31■■□□□ 1.32
NCKAP1-201ENST00000360982 SNW1Q13573 536 aaKnown RBP23.3■■□□□ 1.32
NCKAP1-201ENST00000360982 XAGE2Q96GT9 111 aa23.3■■□□□ 1.32
NCKAP1-201ENST00000360982 ISM2Q6H9L7 571 aa23.3■■□□□ 1.32
NCKAP1-201ENST00000360982 DTHD1Q6ZMT9 781 aa23.3■■□□□ 1.32
NCKAP1-201ENST00000360982 NIM1KQ8IY84 436 aa23.3■■□□□ 1.32
NCKAP1-201ENST00000360982 MROH5Q6ZUA9 1318 aa23.3■■□□□ 1.32
NCKAP1-201ENST00000360982 PLEKHM2Q8IWE5 1019 aa23.3■■□□□ 1.32
NCKAP1-201ENST00000360982 GCKRQ14397 625 aa23.29■■□□□ 1.32
NCKAP1-201ENST00000360982 APBB1IPQ7Z5R6 666 aaPredicted RBP23.29■■□□□ 1.32
NCKAP1-201ENST00000360982 ZFP91Q96JP5 570 aaPredicted RBP23.29■■□□□ 1.32
NCKAP1-201ENST00000360982 IVNS1ABPQ9Y6Y0 642 aa23.29■■□□□ 1.32
NCKAP1-201ENST00000360982 IFFO1Q0D2I5 559 aa23.29■■□□□ 1.32
NCKAP1-201ENST00000360982 APOBRQ0VD83 1088 aa23.29■■□□□ 1.32
NCKAP1-201ENST00000360982 DYDC1Q8WWB3 177 aa23.29■■□□□ 1.32
NCKAP1-201ENST00000360982 BIN2Q9UBW5 565 aaPredicted RBP23.29■■□□□ 1.32
NCKAP1-201ENST00000360982 MARCKSP29966 332 aaPredicted RBP23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 PPM1FP49593 454 aaPredicted RBP23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 DBNDD2Q9BQY9 259 aa23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 TNNQ9UQP3 1299 aa23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 F13A1P00488 732 aa23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 CYLC1P35663 651 aaPredicted RBP23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 CCDC186Q7Z3E2 898 aa23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 MMRN2Q9H8L6 949 aa23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 ZBTB7BO15156 539 aaPredicted RBP23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 GIMAP6Q6P9H5 292 aa23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 DHX37Q8IY37 1157 aaKnown RBP23.28■■□□□ 1.32
NCKAP1-201ENST00000360982 PTPDC1A2A3K4 754 aa23.27■■□□□ 1.32
NCKAP1-201ENST00000360982 MNAT1P51948 309 aa23.27■■□□□ 1.32
NCKAP1-201ENST00000360982 PRPF4BQ13523 1007 aaKnown RBP23.27■■□□□ 1.32
NCKAP1-201ENST00000360982 RPS8P62241 208 aaKnown RBP23.27■■□□□ 1.32
NCKAP1-201ENST00000360982 LRRC45Q96CN5 670 aa23.27■■□□□ 1.32
NCKAP1-201ENST00000360982 DDX17Q92841 729 aaKnown RBP23.27■■□□□ 1.32
NCKAP1-201ENST00000360982 TCIRG1Q13488 830 aa23.27■■□□□ 1.31
NCKAP1-201ENST00000360982 CHST3Q7LGC8 479 aa23.27■■□□□ 1.31
NCKAP1-201ENST00000360982 GCOM1H8Y6P7 765 aaPredicted RBP23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 MYZAPP0CAP1 466 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 IQUBQ8NA54 791 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 DHX58Q96C10 678 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 TRPC5Q9UL62 973 aaPredicted RBP23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 ERBB4Q15303 1308 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 BICDL2A1A5D9 508 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 UBASH3AP57075 661 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 RUFY3Q7L099 469 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 CA8P35219 290 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 ATL3Q6DD88 541 aa23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 SAP30BPQ9UHR5 308 aaKnown RBP23.26■■□□□ 1.31
NCKAP1-201ENST00000360982 AOX1Q06278 1338 aa23.25■■□□□ 1.31
NCKAP1-201ENST00000360982 VGLL3A8MV65 326 aa23.25■■□□□ 1.31
NCKAP1-201ENST00000360982 AK2P54819 239 aa23.25■■□□□ 1.31
NCKAP1-201ENST00000360982 CCDC113Q9H0I3 377 aa23.25■■□□□ 1.31
NCKAP1-201ENST00000360982 EIF4A1P60842 406 aaKnown RBP23.25■■□□□ 1.31
NCKAP1-201ENST00000360982 MYRIPQ8NFW9 859 aa23.25■■□□□ 1.31
NCKAP1-201ENST00000360982 SPECC1Q5M775 1068 aa23.25■■□□□ 1.31
NCKAP1-201ENST00000360982 PRPHP41219 470 aa23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 INTS4Q96HW7 963 aaKnown RBP23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 V9GYY5 206 aaPredicted RBP23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 DKC1O60832 514 aaKnown RBP eCLIP23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 HLTFQ14527 1009 aaKnown RBP eCLIP23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 PPP2R5BQ15173 497 aa23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 DLGAP5Q15398 846 aa23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 TMEM94Q12767 1356 aa23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 POTEB2H3BUK9 544 aa23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 RBSNQ9H1K0 784 aa23.24■■□□□ 1.31
NCKAP1-201ENST00000360982 H7C1D1 291 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 KBTBD3Q8NAB2 608 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 BEGAINQ9BUH8 593 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 COMMD10Q9Y6G5 202 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 DDX12PQ92771 950 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 ZNF408Q9H9D4 720 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 GOPCQ9HD26 462 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 DACT1Q9NYF0 836 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 TNFAIP1Q13829 316 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 USP19O94966 1318 aa23.23■■□□□ 1.31
NCKAP1-201ENST00000360982 MCM7P33993 719 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 ARMT1Q9H993 441 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 GOLGA6L10A0A0M3HER8 536 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 GPAA1O43292 621 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 IVLP07476 585 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 RPL13P26373 211 aaKnown RBP23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 RILPL1Q5EBL4 403 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 CTR9Q6PD62 1173 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 MSANTD4Q8NCY6 345 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 PHKG2P15735 406 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 PPIP5K2O43314 1243 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 SLU7O95391 586 aaKnown RBP23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 DEXIO95424 95 aa23.22■■□□□ 1.31
NCKAP1-201ENST00000360982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.22■■□□□ 1.311e-7■■□□□ 14.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms