RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 AKNAD1Q5T1N1 836 aa13.8□□□□□ -0.2
CCDC144A-204ENST00000360524 WDR66Q8TBY9 1149 aa13.8□□□□□ -0.2
CCDC144A-204ENST00000360524 RRP36Q96EU6 259 aaKnown RBP13.8□□□□□ -0.2
CCDC144A-204ENST00000360524 A0A1W2PP64 1363 aa13.8□□□□□ -0.2
CCDC144A-204ENST00000360524 TSPYL6Q8N831 410 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 SNX21Q969T3 373 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 KIAA0556O60303 1618 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 PLS1Q14651 629 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 DPH6Q7L8W6 267 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 IP6K1Q92551 441 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 TFCP2L1Q9NZI6 479 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 RLBP1P12271 317 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 CPA1P15085 419 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 DCTPP1Q9H773 170 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 MCM9Q9NXL9 1143 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 SOS1Q07889 1333 aaPredicted RBP13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 TACC1O75410 805 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 FERP16591 822 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 ACTN2P35609 894 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 APBB1IPQ7Z5R6 666 aaPredicted RBP13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 RASAL2Q9UJF2 1139 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 ZEB2O60315 1214 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 KRT24Q2M2I5 525 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 CREB3L3Q68CJ9 461 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 HELBQ8NG08 1087 aaPredicted RBP13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 VEZTQ9HBM0 779 aa13.79□□□□□ -0.2
CCDC144A-204ENST00000360524 CALML3P27482 149 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 SPAG1Q07617 926 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 CCDC50Q8IVM0 306 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 EYA3Q99504 573 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 PIK3C2GO75747 1445 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 EEF2P13639 858 aaKnown RBP13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 KRT2P35908 639 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 SEPT6Q14141 434 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 ZNF354CQ86Y25 554 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 TCOF1Q13428 1488 aaKnown RBP13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 PSMA7O14818 248 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 FERMT1Q9BQL6 677 aa13.78□□□□□ -0.2
CCDC144A-204ENST00000360524 TRIM75PA6NK02 468 aa13.77□□□□□ -0.2
CCDC144A-204ENST00000360524 LDHBP07195 334 aaKnown RBP13.77□□□□□ -0.2
CCDC144A-204ENST00000360524 BICC1Q9H694 974 aaKnown RBP13.77□□□□□ -0.2
CCDC144A-204ENST00000360524 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.2
CCDC144A-204ENST00000360524 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.2
CCDC144A-204ENST00000360524 RUFY3Q7L099 469 aa13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 YTHDC2Q9H6S0 1430 aaKnown RBP13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 ZMYM3Q14202 1370 aa13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 RAD50Q92878 1312 aa13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 SPDYE3A6NKU9 549 aa13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 CLNS1AP54105 237 aaKnown RBP13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 RBM17Q96I25 401 aaKnown RBP13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 IQCGQ9H095 443 aaKnown RBP13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 JAG2Q9Y219 1238 aa13.77□□□□□ -0.21
CCDC144A-204ENST00000360524 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 POLD1P28340 1107 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 KCNA6P17658 529 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 PPP1R9BQ96SB3 815 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 FAM76AQ8TAV0 307 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 ZBTB21Q9ULJ3 1066 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
CCDC144A-204ENST00000360524 ARL1P40616 181 aaPredicted RBP13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 GRIPAP1Q4V328 841 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 HDXQ7Z353 690 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 B4DLN1 442 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 KRT79Q5XKE5 535 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 JDP2Q8WYK2 163 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 MAP3K19Q56UN5 1328 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 CCT6AP40227 531 aaKnown RBP13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 CCDC25Q86WR0 208 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 MYRIPQ8NFW9 859 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 ERO1AQ96HE7 468 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 A0A1B0GVL5 298 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 KRT83P78385 493 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 CPLX4Q7Z7G2 160 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 CCDC42Q96M95 316 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 TESK2Q96S53 571 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 RIOK3O14730 519 aaKnown RBP13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 DTNBO60941 627 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 TRAPPC3LQ5T215 181 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 DDX21Q9NR30 783 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
CCDC144A-204ENST00000360524 ADAMTS12P58397 1594 aa13.74□□□□□ -0.21
CCDC144A-204ENST00000360524 TNNI2P48788 182 aa13.74□□□□□ -0.21
CCDC144A-204ENST00000360524 PPARDQ03181 441 aa13.74□□□□□ -0.21
CCDC144A-204ENST00000360524 DHX32Q7L7V1 743 aaKnown RBP13.74□□□□□ -0.21
CCDC144A-204ENST00000360524 PLVAPQ9BX97 442 aa13.74□□□□□ -0.21
CCDC144A-204ENST00000360524 DENND2AQ9ULE3 1009 aa13.74□□□□□ -0.21
CCDC144A-204ENST00000360524 KRT86O43790 486 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms