RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 BRD1O95696 1058 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 F13A1P00488 732 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 DYTNA2CJ06 578 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 MINDY4BA8MYZ0 360 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 IVLP07476 585 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
SIN3A-201ENST00000360439 WWC2Q6AWC2 1192 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 EYA3Q99504 573 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 MYO1CO00159 1063 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 GUCY2CP25092 1073 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 GJB2P29033 226 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 SYT10Q6XYQ8 523 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 TTLL7Q6ZT98 887 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 CCDC83Q8IWF9 413 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 ANAPC4Q9UJX5 808 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 PA2G4Q9UQ80 394 aaKnown RBP11.37□□□□□ -0.59
SIN3A-201ENST00000360439 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
SIN3A-201ENST00000360439 CAPN2P17655 700 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 JAKMIP3Q5VZ66 844 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 PALLDQ8WX93 1383 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 HDAC9Q9UKV0 1011 aa11.37□□□□□ -0.59
SIN3A-201ENST00000360439 IRF6O14896 467 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 MMP14P50281 582 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 FOSBP53539 338 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 PRPF40BQ6NWY9 871 aaKnown RBP11.36□□□□□ -0.59
SIN3A-201ENST00000360439 RNF168Q8IYW5 571 aaPredicted RBP11.36□□□□□ -0.59
SIN3A-201ENST00000360439 USP25Q9UHP3 1055 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 RANBP1P43487 201 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 CCDC181Q5TID7 509 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 ZNF804AQ7Z570 1209 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 ZBTB7AO95365 584 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 LDHCP07864 332 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 LARGE2Q8N3Y3 721 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 OTUD6BQ8N6M0 293 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 CRB1P82279 1406 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 UFL1O94874 794 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 DDIT3P35638 169 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 TTC12Q9H892 705 aaPredicted RBP11.36□□□□□ -0.59
SIN3A-201ENST00000360439 VEZTQ9HBM0 779 aa11.36□□□□□ -0.59
SIN3A-201ENST00000360439 RIOK3O14730 519 aaKnown RBP11.35□□□□□ -0.59
SIN3A-201ENST00000360439 ARHGAP27Q6ZUM4 889 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-201ENST00000360439 SLC4A8Q2Y0W8 1093 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 DPP8Q6V1X1 898 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-201ENST00000360439 ERCC4Q92889 916 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-201ENST00000360439 PDE8AO60658 829 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 ITGA6P23229 1130 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 IL15P40933 162 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-201ENST00000360439 TERF2Q15554 542 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-201ENST00000360439 MKNK2Q9HBH9 465 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-201ENST00000360439 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 WDHD1O75717 1129 aaPredicted RBP11.35□□□□□ -0.59
SIN3A-201ENST00000360439 RINLQ6ZS11 566 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 GAS2L3Q86XJ1 694 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 C2CD5Q86YS7 1000 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 UBXN4Q92575 508 aa11.35□□□□□ -0.59
SIN3A-201ENST00000360439 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 ECM2O94769 699 aaPredicted RBP11.34□□□□□ -0.59
SIN3A-201ENST00000360439 TXNRD1Q16881 649 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
SIN3A-201ENST00000360439 ANKRD2Q9GZV1 360 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 FAM107BQ9H098 131 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 BICC1Q9H694 974 aaKnown RBP11.34□□□□□ -0.59
SIN3A-201ENST00000360439 STAP2Q9UGK3 403 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 SPATA31A1Q5TZJ5 1347 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 TCIRG1Q13488 830 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 MCTP2Q6DN12 878 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 CEP57L1Q8IYX8 460 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
SIN3A-201ENST00000360439 PRAMEF22A3QJZ6 481 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 FAM114A1Q8IWE2 563 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 ZSCAN16Q9H4T2 348 aaPredicted RBP11.34□□□□□ -0.59
SIN3A-201ENST00000360439 TRIM66O15016 1216 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 BAG3O95817 575 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 ALDH1B1P30837 517 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 HSPA4P34932 840 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 PAXBP1Q9Y5B6 917 aa11.34□□□□□ -0.59
SIN3A-201ENST00000360439 NAIF1Q69YI7 327 aaPredicted RBP11.33□□□□□ -0.6
SIN3A-201ENST00000360439 SIRT2Q8IXJ6 389 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 NAPBQ9H115 298 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 RRP15Q9Y3B9 282 aaKnown RBP11.33□□□□□ -0.6
SIN3A-201ENST00000360439 OTUD7AQ8TE49 926 aaPredicted RBP11.33□□□□□ -0.6
SIN3A-201ENST00000360439 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 MECOMQ03112 1051 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 CUL4AQ13619 759 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 TSHZ3Q63HK5 1081 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 SGSM3Q96HU1 749 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 ZNHIT6Q9NWK9 470 aaKnown RBP11.33□□□□□ -0.6
SIN3A-201ENST00000360439 SRP68Q9UHB9 627 aaKnown RBP11.33□□□□□ -0.6
SIN3A-201ENST00000360439 CNPY2Q9Y2B0 182 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 EZRP15311 586 aaKnown RBP11.33□□□□□ -0.6
SIN3A-201ENST00000360439 IL6STP40189 918 aaPredicted RBP11.33□□□□□ -0.6
SIN3A-201ENST00000360439 KCTD17Q8N5Z5 321 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 PAF1Q8N7H5 531 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms