RNA–Protein interactions for RNA: ENST00000359492.6

APOA1-202, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOA1, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-202ENST00000359492 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
APOA1-202ENST00000359492 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
APOA1-202ENST00000359492 PCDH10Q9P2E7 1040 aa17.36■□□□□ 0.37
APOA1-202ENST00000359492 TTF2Q9UNY4 1162 aaKnown RBP17.36■□□□□ 0.37
APOA1-202ENST00000359492 IREB2P48200 963 aaKnown RBP17.35■□□□□ 0.37
APOA1-202ENST00000359492 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
APOA1-202ENST00000359492 C9orf78Q9NZ63 289 aaPredicted RBP17.35■□□□□ 0.37
APOA1-202ENST00000359492 TRIM17Q9Y577 477 aa17.35■□□□□ 0.37
APOA1-202ENST00000359492 POTEFA5A3E0 1075 aa17.34■□□□□ 0.37
APOA1-202ENST00000359492 CRKP46108 304 aa17.34■□□□□ 0.37
APOA1-202ENST00000359492 TAF7LQ5H9L4 462 aa17.34■□□□□ 0.37
APOA1-202ENST00000359492 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.34■□□□□ 0.37
APOA1-202ENST00000359492 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
APOA1-202ENST00000359492 RBM5P52756 815 aaKnown RBP eCLIP17.33■□□□□ 0.36
APOA1-202ENST00000359492 LRRC24Q50LG9 513 aa17.33■□□□□ 0.36
APOA1-202ENST00000359492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.33■□□□□ 0.36
APOA1-202ENST00000359492 CD99L2Q8TCZ2 262 aa17.33■□□□□ 0.36
APOA1-202ENST00000359492 BRI3BPQ8WY22 251 aa17.33■□□□□ 0.36
APOA1-202ENST00000359492 OPTNQ96CV9 577 aa17.33■□□□□ 0.36
APOA1-202ENST00000359492 TMEM39BQ9GZU3 492 aa17.33■□□□□ 0.36
APOA1-202ENST00000359492 BICC1Q9H694 974 aaKnown RBP17.33■□□□□ 0.36
APOA1-202ENST00000359492 ELP3Q9H9T3 547 aa17.33■□□□□ 0.36
APOA1-202ENST00000359492 MROH5Q6ZUA9 1318 aa17.32■□□□□ 0.36
APOA1-202ENST00000359492 TNFAIP1Q13829 316 aa17.32■□□□□ 0.36
APOA1-202ENST00000359492 SLC4A10Q6U841 1118 aa17.32■□□□□ 0.36
APOA1-202ENST00000359492 ARMC5Q96C12 935 aa17.32■□□□□ 0.36
APOA1-202ENST00000359492 TCP10L2B9ZVM9 353 aa17.31■□□□□ 0.36
APOA1-202ENST00000359492 HDLBPQ00341 1268 aaKnown RBP17.31■□□□□ 0.36
APOA1-202ENST00000359492 VGLL4Q14135 290 aa17.31■□□□□ 0.36
APOA1-202ENST00000359492 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
APOA1-202ENST00000359492 ERO1AQ96HE7 468 aa17.31■□□□□ 0.36
APOA1-202ENST00000359492 IQSEC3Q9UPP2 1182 aaPredicted RBP17.31■□□□□ 0.36
APOA1-202ENST00000359492 CEP290O15078 2479 aa17.31■□□□□ 0.36
APOA1-202ENST00000359492 FGFR2P21802 821 aa17.3■□□□□ 0.36
APOA1-202ENST00000359492 MAP3K9P80192 1104 aa17.3■□□□□ 0.36
APOA1-202ENST00000359492 SP3Q02447 781 aa17.3■□□□□ 0.36
APOA1-202ENST00000359492 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
APOA1-202ENST00000359492 MRIQ9BWK5 157 aa17.3■□□□□ 0.36
APOA1-202ENST00000359492 ZSWIM8A7E2V4 1837 aa17.29■□□□□ 0.36
APOA1-202ENST00000359492 PDE8BO95263 885 aa17.29■□□□□ 0.36
APOA1-202ENST00000359492 CACNB3P54284 484 aa17.29■□□□□ 0.36
APOA1-202ENST00000359492 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
APOA1-202ENST00000359492 APOBEC3HQ6NTF7 200 aaKnown RBP17.29■□□□□ 0.36
APOA1-202ENST00000359492 FAM43AQ8N2R8 423 aa17.29■□□□□ 0.36
APOA1-202ENST00000359492 USP44Q9H0E7 712 aa17.29■□□□□ 0.36
APOA1-202ENST00000359492 SNCAIPQ9Y6H5 919 aa17.29■□□□□ 0.36
APOA1-202ENST00000359492 SPDYE5A6NIY4 337 aa17.28■□□□□ 0.36
APOA1-202ENST00000359492 RFX5P48382 616 aaPredicted RBP17.28■□□□□ 0.36
APOA1-202ENST00000359492 OTUD7BQ6GQQ9 843 aa17.28■□□□□ 0.36
APOA1-202ENST00000359492 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
APOA1-202ENST00000359492 ZDHHC15Q96MV8 337 aa17.28■□□□□ 0.36
APOA1-202ENST00000359492 EFCC1Q9HA90 598 aa17.28■□□□□ 0.36
APOA1-202ENST00000359492 RANBP2P49792 3224 aaKnown RBP17.27■□□□□ 0.36
APOA1-202ENST00000359492 BCAMP50895 628 aa17.27■□□□□ 0.36
APOA1-202ENST00000359492 KIF16BQ96L93 1317 aa17.26■□□□□ 0.35
APOA1-202ENST00000359492 CCL15-CCL14A0A0B4J2E2 113 aa17.26■□□□□ 0.35
APOA1-202ENST00000359492 EN2P19622 333 aaPredicted RBP17.26■□□□□ 0.35
APOA1-202ENST00000359492 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
APOA1-202ENST00000359492 CCL15Q16663 113 aa17.26■□□□□ 0.35
APOA1-202ENST00000359492 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
APOA1-202ENST00000359492 FKBP1CQ5VVH2 108 aa17.26■□□□□ 0.35
APOA1-202ENST00000359492 FAM83AQ86UY5 434 aa17.26■□□□□ 0.35
APOA1-202ENST00000359492 TBC1D22AQ8WUA7 517 aa17.26■□□□□ 0.35
APOA1-202ENST00000359492 ZNF333Q96JL9 665 aa17.26■□□□□ 0.35
APOA1-202ENST00000359492 GTF2A2P52657 109 aa17.25■□□□□ 0.35
APOA1-202ENST00000359492 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
APOA1-202ENST00000359492 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
APOA1-202ENST00000359492 TEKT1Q969V4 418 aa17.25■□□□□ 0.35
APOA1-202ENST00000359492 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
APOA1-202ENST00000359492 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
APOA1-202ENST00000359492 TNNI2P48788 182 aa17.24■□□□□ 0.35
APOA1-202ENST00000359492 TAF1CQ15572 869 aaPredicted RBP17.24■□□□□ 0.35
APOA1-202ENST00000359492 ATG9AQ7Z3C6 839 aa17.24■□□□□ 0.35
APOA1-202ENST00000359492 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
APOA1-202ENST00000359492 SUGT1Q9Y2Z0 365 aa17.24■□□□□ 0.35
APOA1-202ENST00000359492 PTCH2Q9Y6C5 1203 aa17.24■□□□□ 0.35
APOA1-202ENST00000359492 PTPRCP08575 1304 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 BTBD19C9JJ37 291 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 IRF6O14896 467 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 HHIPL2Q6UWX4 724 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 VPS37DQ86XT2 251 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 ERO1BQ86YB8 467 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 ARHGAP39Q9C0H5 1083 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 ZFYVE28Q9HCC9 887 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 SZT2Q5T011 3432 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
APOA1-202ENST00000359492 TLR2O60603 784 aa17.22■□□□□ 0.35
APOA1-202ENST00000359492 CTGFP29279 349 aa17.22■□□□□ 0.35
APOA1-202ENST00000359492 MOGSQ13724 837 aa17.22■□□□□ 0.35
APOA1-202ENST00000359492 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
APOA1-202ENST00000359492 CSADQ9Y600 493 aa17.22■□□□□ 0.35
APOA1-202ENST00000359492 EYA2O00167 538 aa17.21■□□□□ 0.35
APOA1-202ENST00000359492 INPP5BP32019 993 aa17.21■□□□□ 0.35
APOA1-202ENST00000359492 PPIL2Q13356 520 aa17.21■□□□□ 0.35
APOA1-202ENST00000359492 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.35
APOA1-202ENST00000359492 WRNIP1Q96S55 665 aa17.21■□□□□ 0.35
APOA1-202ENST00000359492 ZNF112Q9UJU3 913 aa17.21■□□□□ 0.35
APOA1-202ENST00000359492 ADGRA2Q96PE1 1338 aa17.21■□□□□ 0.34
APOA1-202ENST00000359492 CETPP11597 493 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms