RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 CDAN1Q8IWY9 1227 aa29.05■■■□□ 2.24
YIF1A-201ENST00000359461 ANKRD44Q8N8A2 993 aa29.05■■■□□ 2.24
YIF1A-201ENST00000359461 VGLL2Q8N8G2 317 aa29.05■■■□□ 2.24
YIF1A-201ENST00000359461 PTPN18Q99952 460 aa29.05■■■□□ 2.24
YIF1A-201ENST00000359461 TRIM17Q9Y577 477 aa29.05■■■□□ 2.24
YIF1A-201ENST00000359461 CENPFP49454 3210 aa29.04■■■□□ 2.24
YIF1A-201ENST00000359461 OTUD7BQ6GQQ9 843 aa29.04■■■□□ 2.24
YIF1A-201ENST00000359461 GRIK5Q16478 980 aa29.03■■■□□ 2.24
YIF1A-201ENST00000359461 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.03■■■□□ 2.24
YIF1A-201ENST00000359461 OPTNQ96CV9 577 aa29.03■■■□□ 2.24
YIF1A-201ENST00000359461 ERO1AQ96HE7 468 aa29.03■■■□□ 2.24
YIF1A-201ENST00000359461 MS4A4AQ96JQ5 239 aa29.03■■■□□ 2.24
YIF1A-201ENST00000359461 HDLBPQ00341 1268 aaKnown RBP29.02■■■□□ 2.24
YIF1A-201ENST00000359461 LRRC24Q50LG9 513 aa29.02■■■□□ 2.24
YIF1A-201ENST00000359461 FAM9BQ8IZU0 186 aa29.02■■■□□ 2.24
YIF1A-201ENST00000359461 ELP3Q9H9T3 547 aa29.02■■■□□ 2.24
YIF1A-201ENST00000359461 MRPL50Q8N5N7 158 aaKnown RBP29.01■■■□□ 2.23
YIF1A-201ENST00000359461 TMEM39BQ9GZU3 492 aa29.01■■■□□ 2.23
YIF1A-201ENST00000359461 KIAA0100Q14667 2235 aaKnown RBP29.01■■■□□ 2.23
YIF1A-201ENST00000359461 ZNF316A6NFI3 1004 aaPredicted RBP29■■■□□ 2.23
YIF1A-201ENST00000359461 TCP10L2B9ZVM9 353 aa29■■■□□ 2.23
YIF1A-201ENST00000359461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29■■■□□ 2.231e-6■■■□□ 18.4
YIF1A-201ENST00000359461 TBC1D22AQ8WUA7 517 aa29■■■□□ 2.23
YIF1A-201ENST00000359461 PTPRCP08575 1304 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 KIF16BQ96L93 1317 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 PDE8BO95263 885 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 TNNI2P48788 182 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 VGLL4Q14135 290 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 METTL24Q5JXM2 366 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 CD99L2Q8TCZ2 262 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 PCDH10Q9P2E7 1040 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 IQSEC3Q9UPP2 1182 aaPredicted RBP28.99■■■□□ 2.23
YIF1A-201ENST00000359461 PTPN22Q9Y2R2 807 aa28.99■■■□□ 2.23
YIF1A-201ENST00000359461 INTS3Q68E01 1043 aaKnown RBP28.98■■■□□ 2.23
YIF1A-201ENST00000359461 VPS37DQ86XT2 251 aa28.98■■■□□ 2.23
YIF1A-201ENST00000359461 MKI67P46013 3256 aaKnown RBP28.98■■■□□ 2.23
YIF1A-201ENST00000359461 CAP1Q01518 475 aa28.97■■■□□ 2.23
YIF1A-201ENST00000359461 CAVIN4Q5BKX8 364 aa28.97■■■□□ 2.23
YIF1A-201ENST00000359461 CNKSR2Q8WXI2 1034 aa28.97■■■□□ 2.23
YIF1A-201ENST00000359461 BRI3BPQ8WY22 251 aa28.97■■■□□ 2.23
YIF1A-201ENST00000359461 MAP3K9P80192 1104 aa28.96■■■□□ 2.23
YIF1A-201ENST00000359461 SP3Q02447 781 aa28.96■■■□□ 2.23
YIF1A-201ENST00000359461 CHAF1AQ13111 956 aaPredicted RBP28.96■■■□□ 2.23
YIF1A-201ENST00000359461 TEKT1Q969V4 418 aa28.96■■■□□ 2.23
YIF1A-201ENST00000359461 MRIQ9BWK5 157 aa28.96■■■□□ 2.23
YIF1A-201ENST00000359461 ARMC5Q96C12 935 aa28.95■■■□□ 2.22
YIF1A-201ENST00000359461 ZDHHC15Q96MV8 337 aa28.95■■■□□ 2.22
YIF1A-201ENST00000359461 RPAP1Q9BWH6 1393 aaPredicted RBP28.95■■■□□ 2.22
YIF1A-201ENST00000359461 FGFR2P21802 821 aa28.94■■■□□ 2.22
YIF1A-201ENST00000359461 GTF2A2P52657 109 aa28.94■■■□□ 2.22
YIF1A-201ENST00000359461 KLHDC4Q8TBB5 520 aa28.94■■■□□ 2.22
YIF1A-201ENST00000359461 USP44Q9H0E7 712 aa28.94■■■□□ 2.22
YIF1A-201ENST00000359461 EFCC1Q9HA90 598 aa28.94■■■□□ 2.22
YIF1A-201ENST00000359461 SUGT1Q9Y2Z0 365 aa28.94■■■□□ 2.22
YIF1A-201ENST00000359461 ZSWIM8A7E2V4 1837 aa28.94■■■□□ 2.22
YIF1A-201ENST00000359461 BRCA2P51587 3418 aa28.94■■■□□ 2.22
YIF1A-201ENST00000359461 POTEFA5A3E0 1075 aa28.93■■■□□ 2.22
YIF1A-201ENST00000359461 ZEB1P37275 1124 aaPredicted RBP28.93■■■□□ 2.22
YIF1A-201ENST00000359461 BCAMP50895 628 aa28.93■■■□□ 2.22
YIF1A-201ENST00000359461 FKBP1CQ5VVH2 108 aa28.93■■■□□ 2.22
YIF1A-201ENST00000359461 FAM83AQ86UY5 434 aa28.93■■■□□ 2.22
YIF1A-201ENST00000359461 CSADQ9Y600 493 aa28.93■■■□□ 2.22
YIF1A-201ENST00000359461 MAST3O60307 1309 aa28.93■■■□□ 2.22
YIF1A-201ENST00000359461 CCL15-CCL14A0A0B4J2E2 113 aa28.92■■■□□ 2.22
YIF1A-201ENST00000359461 SPDYE5A6NIY4 337 aa28.92■■■□□ 2.22
YIF1A-201ENST00000359461 FRAT2O75474 233 aaPredicted RBP28.92■■■□□ 2.22
YIF1A-201ENST00000359461 CACNB3P54284 484 aa28.92■■■□□ 2.22
YIF1A-201ENST00000359461 PUM3Q15397 648 aaKnown RBP28.92■■■□□ 2.22
YIF1A-201ENST00000359461 CCL15Q16663 113 aa28.92■■■□□ 2.22
YIF1A-201ENST00000359461 SNCAIPQ9Y6H5 919 aa28.92■■■□□ 2.22
YIF1A-201ENST00000359461 APOBEC3HQ6NTF7 200 aaKnown RBP28.91■■■□□ 2.22
YIF1A-201ENST00000359461 SSH1Q8WYL5 1049 aa28.91■■■□□ 2.22
YIF1A-201ENST00000359461 OTUD5Q96G74 571 aa28.91■■■□□ 2.22
YIF1A-201ENST00000359461 RFX5P48382 616 aaPredicted RBP28.9■■■□□ 2.22
YIF1A-201ENST00000359461 TAF1CQ15572 869 aaPredicted RBP28.9■■■□□ 2.22
YIF1A-201ENST00000359461 FAM43AQ8N2R8 423 aa28.9■■■□□ 2.22
YIF1A-201ENST00000359461 IFIT1P09914 478 aaKnown RBP28.89■■■□□ 2.22
YIF1A-201ENST00000359461 HHIPL2Q6UWX4 724 aa28.89■■■□□ 2.22
YIF1A-201ENST00000359461 ZFYVE28Q9HCC9 887 aa28.89■■■□□ 2.22
YIF1A-201ENST00000359461 TMOD2Q9NZR1 351 aa28.89■■■□□ 2.22
YIF1A-201ENST00000359461 E9PSI1 815 aa28.88■■■□□ 2.21
YIF1A-201ENST00000359461 ZCCHC17Q9NP64 241 aaKnown RBP28.88■■■□□ 2.21
YIF1A-201ENST00000359461 ERO1BQ86YB8 467 aa28.87■■■□□ 2.21
YIF1A-201ENST00000359461 HOOK2Q96ED9 719 aa28.87■■■□□ 2.21
YIF1A-201ENST00000359461 WRNIP1Q96S55 665 aa28.87■■■□□ 2.21
YIF1A-201ENST00000359461 EYA2O00167 538 aa28.86■■■□□ 2.21
YIF1A-201ENST00000359461 AK9Q5TCS8 1911 aa28.86■■■□□ 2.21
YIF1A-201ENST00000359461 ZNF333Q96JL9 665 aa28.85■■■□□ 2.21
YIF1A-201ENST00000359461 CETPP11597 493 aa28.84■■■□□ 2.21
YIF1A-201ENST00000359461 PPIL2Q13356 520 aa28.84■■■□□ 2.21
YIF1A-201ENST00000359461 ALDH1L2Q3SY69 923 aa28.84■■■□□ 2.21
YIF1A-201ENST00000359461 ATG9AQ7Z3C6 839 aa28.84■■■□□ 2.21
YIF1A-201ENST00000359461 LPIN2Q92539 896 aa28.84■■■□□ 2.21
YIF1A-201ENST00000359461 ZKSCAN4Q969J2 545 aaPredicted RBP28.84■■■□□ 2.21
YIF1A-201ENST00000359461 DOCK2Q92608 1830 aa28.84■■■□□ 2.21
YIF1A-201ENST00000359461 SLC5A1P13866 664 aa28.83■■■□□ 2.21
YIF1A-201ENST00000359461 SLFN5Q08AF3 891 aa28.83■■■□□ 2.21
YIF1A-201ENST00000359461 ARHGEF6Q15052 776 aa28.83■■■□□ 2.21
YIF1A-201ENST00000359461 WDR66Q8TBY9 1149 aa28.83■■■□□ 2.21
YIF1A-201ENST00000359461 IRF6O14896 467 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms