RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 INHBEP58166 350 aa12.85□□□□□ -0.35
LINC01560-201ENST00000357412 VPS37DQ86XT2 251 aa12.85□□□□□ -0.35
LINC01560-201ENST00000357412 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
LINC01560-201ENST00000357412 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
LINC01560-201ENST00000357412 IQSEC3Q9UPP2 1182 aaPredicted RBP12.85□□□□□ -0.35
LINC01560-201ENST00000357412 FKTNO75072 461 aa12.84□□□□□ -0.35
LINC01560-201ENST00000357412 FGFR2P21802 821 aa12.84□□□□□ -0.35
LINC01560-201ENST00000357412 CHAF1AQ13111 956 aaPredicted RBP12.84□□□□□ -0.35
LINC01560-201ENST00000357412 TNFAIP1Q13829 316 aa12.84□□□□□ -0.35
LINC01560-201ENST00000357412 ALDH1L2Q3SY69 923 aa12.84□□□□□ -0.35
LINC01560-201ENST00000357412 CAVIN4Q5BKX8 364 aa12.84□□□□□ -0.35
LINC01560-201ENST00000357412 ANKRD13AQ8IZ07 590 aa12.84□□□□□ -0.35
LINC01560-201ENST00000357412 TRMT2AQ8IZ69 625 aaKnown RBP12.84□□□□□ -0.35
LINC01560-201ENST00000357412 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
LINC01560-201ENST00000357412 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
LINC01560-201ENST00000357412 TCP10L2B9ZVM9 353 aa12.83□□□□□ -0.36
LINC01560-201ENST00000357412 HDLBPQ00341 1268 aaKnown RBP12.83□□□□□ -0.36
LINC01560-201ENST00000357412 TBC1D22AQ8WUA7 517 aa12.83□□□□□ -0.36
LINC01560-201ENST00000357412 MRIQ9BWK5 157 aa12.83□□□□□ -0.36
LINC01560-201ENST00000357412 TMEM39BQ9GZU3 492 aa12.83□□□□□ -0.36
LINC01560-201ENST00000357412 EYA2O00167 538 aa12.82□□□□□ -0.36
LINC01560-201ENST00000357412 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
LINC01560-201ENST00000357412 PUM3Q15397 648 aaKnown RBP12.82□□□□□ -0.36
LINC01560-201ENST00000357412 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
LINC01560-201ENST00000357412 FBXO46Q6PJ61 603 aaPredicted RBP12.82□□□□□ -0.36
LINC01560-201ENST00000357412 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.82□□□□□ -0.36
LINC01560-201ENST00000357412 PTPN18Q99952 460 aa12.82□□□□□ -0.36
LINC01560-201ENST00000357412 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
LINC01560-201ENST00000357412 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
LINC01560-201ENST00000357412 IFIT1P09914 478 aaKnown RBP12.81□□□□□ -0.36
LINC01560-201ENST00000357412 CACNB3P54284 484 aa12.81□□□□□ -0.36
LINC01560-201ENST00000357412 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
LINC01560-201ENST00000357412 TEKT1Q969V4 418 aa12.81□□□□□ -0.36
LINC01560-201ENST00000357412 ZDHHC15Q96MV8 337 aa12.81□□□□□ -0.36
LINC01560-201ENST00000357412 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
LINC01560-201ENST00000357412 SUGT1Q9Y2Z0 365 aa12.81□□□□□ -0.36
LINC01560-201ENST00000357412 TNNI2P48788 182 aa12.8□□□□□ -0.36
LINC01560-201ENST00000357412 MAP3K9P80192 1104 aa12.8□□□□□ -0.36
LINC01560-201ENST00000357412 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC01560-201ENST00000357412 LPIN2Q92539 896 aa12.8□□□□□ -0.36
LINC01560-201ENST00000357412 OPTNQ96CV9 577 aa12.8□□□□□ -0.36
LINC01560-201ENST00000357412 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
LINC01560-201ENST00000357412 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
LINC01560-201ENST00000357412 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
LINC01560-201ENST00000357412 CRHR2Q13324 411 aa12.79□□□□□ -0.36
LINC01560-201ENST00000357412 VGLL4Q14135 290 aa12.79□□□□□ -0.36
LINC01560-201ENST00000357412 OTUD7BQ6GQQ9 843 aa12.79□□□□□ -0.36
LINC01560-201ENST00000357412 BRI3BPQ8WY22 251 aa12.79□□□□□ -0.36
LINC01560-201ENST00000357412 PSME4Q14997 1843 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 CASP8AP2Q9UKL3 1982 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 CIAO1O76071 339 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
LINC01560-201ENST00000357412 SLC5A1P13866 664 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 FKBP1CQ5VVH2 108 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 HHIPL2Q6UWX4 724 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 OTOP1Q7RTM1 612 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 FAM83AQ86UY5 434 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 TRIM17Q9Y577 477 aa12.78□□□□□ -0.36
LINC01560-201ENST00000357412 ZNF646O15015 1829 aaPredicted RBP12.78□□□□□ -0.36
LINC01560-201ENST00000357412 SLC34A2O95436 690 aa12.77□□□□□ -0.37
LINC01560-201ENST00000357412 CAP1Q01518 475 aa12.77□□□□□ -0.37
LINC01560-201ENST00000357412 WDR66Q8TBY9 1149 aa12.77□□□□□ -0.37
LINC01560-201ENST00000357412 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.37
LINC01560-201ENST00000357412 SIL1Q9H173 461 aa12.77□□□□□ -0.37
LINC01560-201ENST00000357412 POLR2AP24928 1970 aaKnown RBP12.77□□□□□ -0.37
LINC01560-201ENST00000357412 MAST3O60307 1309 aa12.77□□□□□ -0.37
LINC01560-201ENST00000357412 CCL15-CCL14A0A0B4J2E2 113 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 GTF2A2P52657 109 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
LINC01560-201ENST00000357412 CCL15Q16663 113 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 ATP2B3Q16720 1220 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 FAM43AQ8N2R8 423 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 CD99L2Q8TCZ2 262 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 TMOD2Q9NZR1 351 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 CEP126Q9P2H0 1117 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 CSADQ9Y600 493 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 LRRFIP2Q9Y608 721 aaKnown RBP12.76□□□□□ -0.37
LINC01560-201ENST00000357412 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
LINC01560-201ENST00000357412 PRDX5P30044 214 aa12.75□□□□□ -0.37
LINC01560-201ENST00000357412 IL15P40933 162 aaPredicted RBP12.75□□□□□ -0.37
LINC01560-201ENST00000357412 SP3Q02447 781 aa12.75□□□□□ -0.37
LINC01560-201ENST00000357412 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
LINC01560-201ENST00000357412 ZKSCAN4Q969J2 545 aaPredicted RBP12.75□□□□□ -0.37
LINC01560-201ENST00000357412 WRNIP1Q96S55 665 aa12.75□□□□□ -0.37
LINC01560-201ENST00000357412 MEIS3Q99687 375 aa12.75□□□□□ -0.37
LINC01560-201ENST00000357412 COPRSQ9NQ92 184 aa12.75□□□□□ -0.37
LINC01560-201ENST00000357412 PA2G4Q9UQ80 394 aaKnown RBP12.75□□□□□ -0.37
LINC01560-201ENST00000357412 PTPN22Q9Y2R2 807 aa12.75□□□□□ -0.37
LINC01560-201ENST00000357412 CCER2I3L3R5 266 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 IRF6O14896 467 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 PHKA1P46020 1223 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 NFIAQ12857 509 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 MIGA2Q7L4E1 593 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 ERO1BQ86YB8 467 aa12.74□□□□□ -0.37
LINC01560-201ENST00000357412 FAM151AQ8WW52 585 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms