RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 AOC3Q16853 763 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 ZGPATQ8N5A5 531 aaKnown RBP21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 SUPT20HQ8NEM7 779 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 KCNB2Q92953 911 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 PSMD1Q99460 953 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 DBNDD1Q9H9R9 158 aa21.75■■□□□ 1.07
SMARCD3-202ENST00000356800 ANAPC15P60006 121 aa21.74■■□□□ 1.07
SMARCD3-202ENST00000356800 GTF2IP78347 998 aa21.74■■□□□ 1.07
SMARCD3-202ENST00000356800 SPTY2D1Q68D10 685 aaPredicted RBP21.74■■□□□ 1.07
SMARCD3-202ENST00000356800 NAA16Q6N069 864 aaPredicted RBP21.74■■□□□ 1.07
SMARCD3-202ENST00000356800 STRBPQ96SI9 672 aaKnown RBP21.74■■□□□ 1.07
SMARCD3-202ENST00000356800 SNX14Q9Y5W7 946 aa21.74■■□□□ 1.07
SMARCD3-202ENST00000356800 MYH2Q9UKX2 1941 aa21.73■■□□□ 1.07
SMARCD3-202ENST00000356800 ARFGEF1Q9Y6D6 1849 aa21.73■■□□□ 1.07
SMARCD3-202ENST00000356800 MBD4O95243 580 aa21.73■■□□□ 1.07
SMARCD3-202ENST00000356800 SOGA3Q5TF21 947 aa21.73■■□□□ 1.07
SMARCD3-202ENST00000356800 CREB3L3Q68CJ9 461 aa21.73■■□□□ 1.07
SMARCD3-202ENST00000356800 SLC27A2O14975 620 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 LDHBP07195 334 aaKnown RBP21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 RABEP1Q15276 862 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 MFSD14BQ5SR56 506 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 MIGA1Q8NAN2 632 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 AIDAQ96BJ3 306 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 KCNQ5Q9NR82 932 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 U3KPZ7 1027 aaPredicted RBP21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 COL4A5P29400 1685 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 G3V3G9 751 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 ECE2O60344 883 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 DCAF8Q5TAQ9 597 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 PODNQ7Z5L7 613 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 LCORLQ8N3X6 602 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 TBC1D22AQ8WUA7 517 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 SNX21Q969T3 373 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 ARMT1Q9H993 441 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 TAF6LQ9Y6J9 622 aa21.72■■□□□ 1.07
SMARCD3-202ENST00000356800 PSME4Q14997 1843 aa21.71■■□□□ 1.07
SMARCD3-202ENST00000356800 PPIP5K2O43314 1243 aa21.71■■□□□ 1.07
SMARCD3-202ENST00000356800 DZIP1Q86YF9 867 aaKnown RBP21.71■■□□□ 1.07
SMARCD3-202ENST00000356800 DAXXQ9UER7 740 aaPredicted RBP21.71■■□□□ 1.07
SMARCD3-202ENST00000356800 IGSF3O75054 1194 aa21.7■■□□□ 1.06
SMARCD3-202ENST00000356800 TTLL5Q6EMB2 1281 aa21.7■■□□□ 1.06
SMARCD3-202ENST00000356800 CERS5Q8N5B7 392 aa21.7■■□□□ 1.06
SMARCD3-202ENST00000356800 RIOK1Q9BRS2 568 aaKnown RBP21.7■■□□□ 1.06
SMARCD3-202ENST00000356800 TBC1D2Q9BYX2 928 aa21.7■■□□□ 1.06
SMARCD3-202ENST00000356800 ZNF277Q9NRM2 450 aaPredicted RBP21.7■■□□□ 1.06
SMARCD3-202ENST00000356800 TMED8Q6PL24 325 aaPredicted RBP21.69■■□□□ 1.06
SMARCD3-202ENST00000356800 MXD3Q9BW11 206 aa21.69■■□□□ 1.06
SMARCD3-202ENST00000356800 BCS1LQ9Y276 419 aa21.69■■□□□ 1.06
SMARCD3-202ENST00000356800 MAGEB6P1A0A0J9YX57 407 aa21.69■■□□□ 1.06
SMARCD3-202ENST00000356800 FBXW7Q969H0 707 aa21.69■■□□□ 1.06
SMARCD3-202ENST00000356800 FHDC1Q9C0D6 1143 aaPredicted RBP21.69■■□□□ 1.06
SMARCD3-202ENST00000356800 YDJCA8MPS7 323 aa21.68■■□□□ 1.06
SMARCD3-202ENST00000356800 PRKAB2O43741 272 aa21.68■■□□□ 1.06
SMARCD3-202ENST00000356800 FGAP02671 866 aa21.68■■□□□ 1.06
SMARCD3-202ENST00000356800 CYP21A2P08686 494 aa21.68■■□□□ 1.06
SMARCD3-202ENST00000356800 DYNLL1P63167 89 aaKnown RBP21.68■■□□□ 1.06
SMARCD3-202ENST00000356800 DIXDC1Q155Q3 683 aa21.68■■□□□ 1.06
SMARCD3-202ENST00000356800 IL27Q8NEV9 243 aa21.68■■□□□ 1.06
SMARCD3-202ENST00000356800 LAMA4Q16363 1823 aa21.68■■□□□ 1.06
SMARCD3-202ENST00000356800 NFKBIEO00221 500 aa21.67■■□□□ 1.06
SMARCD3-202ENST00000356800 CD2BP2O95400 341 aaKnown RBP21.67■■□□□ 1.06
SMARCD3-202ENST00000356800 ADCK5Q3MIX3 580 aa21.67■■□□□ 1.06
SMARCD3-202ENST00000356800 EPB41L4AQ9HCS5 686 aaPredicted RBP21.67■■□□□ 1.06
SMARCD3-202ENST00000356800 GSG1L2A8MUP6 293 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 TSGA10IPQ3SY00 556 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 RNF20Q5VTR2 975 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 VPS33BQ9H267 617 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 PATL2C9JE40 543 aaKnown RBP21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 ZKSCAN1P17029 563 aaPredicted RBP21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 SLC4A3P48751 1232 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 GSTO1P78417 241 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 DACT2Q5SW24 774 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 STRIP1Q5VSL9 837 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 LARGE2Q8N3Y3 721 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 SUGT1Q9Y2Z0 365 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 SLC4A4Q9Y6R1 1079 aa21.66■■□□□ 1.06
SMARCD3-202ENST00000356800 ADAMTSL1Q8N6G6 1762 aa21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 CDK5RAP2Q96SN8 1893 aa21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 BAZ2AQ9UIF9 1905 aaKnown RBP21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 GNAT2P19087 354 aa21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 COL9A3Q14050 684 aaPredicted RBP21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 ALX1Q15699 326 aa21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 HSCBQ8IWL3 235 aa21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 TAOK3Q9H2K8 898 aa21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 AATFQ9NY61 560 aaKnown RBP eCLIP21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 RPAP1Q9BWH6 1393 aaPredicted RBP21.65■■□□□ 1.06
SMARCD3-202ENST00000356800 MROH7-TTC4A0A0A0MT08 1334 aa21.64■■□□□ 1.06
SMARCD3-202ENST00000356800 USP17L3A6NCW0 530 aa21.64■■□□□ 1.05
SMARCD3-202ENST00000356800 USP17L4A6NCW7 530 aa21.64■■□□□ 1.05
SMARCD3-202ENST00000356800 APPP05067 770 aa21.64■■□□□ 1.05
SMARCD3-202ENST00000356800 IARSP41252 1262 aaKnown RBP21.64■■□□□ 1.05
SMARCD3-202ENST00000356800 USP17L1Q7RTZ2 530 aa21.64■■□□□ 1.05
SMARCD3-202ENST00000356800 IFNL3Q8IZI9 196 aa21.64■■□□□ 1.05
SMARCD3-202ENST00000356800 UPF3BQ9BZI7 483 aaKnown RBP21.64■■□□□ 1.05
SMARCD3-202ENST00000356800 CTNNA3Q9UI47 895 aa21.64■■□□□ 1.05
SMARCD3-202ENST00000356800 FKBP1AP62942 108 aaKnown RBP21.63■■□□□ 1.05
SMARCD3-202ENST00000356800 JAKMIP1Q96N16 626 aaKnown RBP21.63■■□□□ 1.05
SMARCD3-202ENST00000356800 TM6SF1Q9BZW5 370 aa21.63■■□□□ 1.05
SMARCD3-202ENST00000356800 ZMYM6O95789 1325 aa21.63■■□□□ 1.05
SMARCD3-202ENST00000356800 LDHCP07864 332 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms