RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 MCM9Q9NXL9 1143 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 CRCPO75575 148 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 IDI1Q13907 227 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 CCDC184Q52MB2 194 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 LMBR1LQ6UX01 489 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 COPS6Q7L5N1 327 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 NECAB1Q8N987 351 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 LUC7L2Q9Y383 392 aaKnown RBP7.27□□□□□ -1.25
UPF2-201ENST00000356352 RPRD2Q5VT52 1461 aaKnown RBP7.27□□□□□ -1.25
UPF2-201ENST00000356352 PLB1Q6P1J6 1458 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 ELP1O95163 1332 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 A6NNZ2 444 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 F8W031 263 aaPredicted RBP7.27□□□□□ -1.25
UPF2-201ENST00000356352 IL2RBP14784 551 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 TUBB8Q3ZCM7 444 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 LINS1Q8NG48 757 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 CCDC114Q96M63 670 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 NOX5Q96PH1 765 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 FNBP1Q96RU3 617 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 NKIRAS1Q9NYS0 192 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 SERPINA10Q9UK55 444 aa7.27□□□□□ -1.25
UPF2-201ENST00000356352 ERCC5P28715 1186 aaPredicted RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 HS1BP3Q53T59 392 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 FYB2Q5VWT5 728 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 PPFIBP2Q8ND30 876 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 FAM204AQ9H8W3 233 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 DACT1Q9NYF0 836 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 EBAG9O00559 213 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 BACH1O14867 736 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 ATP2C2O75185 946 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 SEPT6Q14141 434 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 CNNM4Q6P4Q7 775 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 MRPL50Q8N5N7 158 aaKnown RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 CDCA7Q9BWT1 371 aaPredicted RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 TMOD4Q9NZQ9 345 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 PCDH11XQ9BZA7 1347 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 PCDH11YQ9BZA8 1340 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 GRIN2AQ12879 1464 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 FLT4P35916 1363 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 MARCKSP29966 332 aaPredicted RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 LACTBP83111 547 aaPredicted RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 DHX32Q7L7V1 743 aaKnown RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 DPH6Q7L8W6 267 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 CPLX4Q7Z7G2 160 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 PRPF31Q8WWY3 499 aaKnown RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 INTS4Q96HW7 963 aaKnown RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 SEC62Q99442 399 aaKnown RBP7.26□□□□□ -1.25
UPF2-201ENST00000356352 ARHGEF10LQ9HCE6 1279 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 PRDM10Q9NQV6 1147 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 KDM5BQ9UGL1 1544 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 MAP3K5Q99683 1374 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 CCDC160A6NGH7 325 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 PTGS1P23219 599 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 MCM7P33993 719 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 TAOK1Q7L7X3 1001 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 CCDC186Q7Z3E2 898 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 MAGEB6Q8N7X4 407 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 IFT74Q96LB3 600 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 DNAJC25Q9H1X3 360 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 KCNG1Q9UIX4 513 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 AGTPBP1Q9UPW5 1226 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 PLCH2O75038 1416 aa7.26□□□□□ -1.25
UPF2-201ENST00000356352 GIGYF1O75420 1035 aaPredicted RBP7.25□□□□□ -1.25
UPF2-201ENST00000356352 TYRO3Q06418 890 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 SRGAP1Q7Z6B7 1085 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 RSPH14Q9UHP6 348 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 UHRF1BP1LA0JNW5 1464 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 TRPM2O94759 1503 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 DUOX2Q9NRD8 1548 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 E7EVH7 732 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 IRS4O14654 1257 aaPredicted RBP7.25□□□□□ -1.25
UPF2-201ENST00000356352 ACTN4O43707 911 aaKnown RBP7.25□□□□□ -1.25
UPF2-201ENST00000356352 STRN3Q13033 797 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 INTS8Q75QN2 995 aaKnown RBP7.25□□□□□ -1.25
UPF2-201ENST00000356352 RUFY3Q7L099 469 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 UBL4BQ8N7F7 174 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 SIRT1Q96EB6 747 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 ARID5AQ03989 594 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 RILPL1Q5EBL4 403 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 HDXQ7Z353 690 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.25□□□□□ -1.25
UPF2-201ENST00000356352 KIFC2Q96AC6 838 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 TMEM87BQ96K49 555 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.25□□□□□ -1.251e-6■■■□□ 16.3
UPF2-201ENST00000356352 MCM6Q14566 821 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 VPS52Q8N1B4 723 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 FAM76AQ8TAV0 307 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 STMN2Q93045 179 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 DCAF5Q96JK2 942 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 NUP58Q9BVL2 599 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 KCNK9Q9NPC2 374 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 PICK1Q9NRD5 415 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 GUCA1BQ9UMX6 200 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 PTPDC1A2A3K4 754 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 FAM83GA6ND36 823 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 AKR1B15C9JRZ8 316 aaPredicted RBP7.25□□□□□ -1.25
UPF2-201ENST00000356352 KRT5P13647 590 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 PARP10Q53GL7 1025 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 FBXO31Q5XUX0 539 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms