RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 RNF168Q8IYW5 571 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 CARD6Q9BX69 1037 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 TRIM31Q9BZY9 425 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 ZNF500O60304 480 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 PPP2R5CQ13362 524 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 CLUL1Q15846 466 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 KIAA1524Q8TCG1 905 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 MORC4Q8TE76 937 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 PTPRCP08575 1304 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 SPTLC2O15270 562 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 C8orf74Q6P047 294 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.39□□□□□ -0.434e-9■■■□□ 16.2
GTF3C1-201ENST00000356183 KRT2P35908 639 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 MUM1Q2TAK8 710 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 DACT3Q96B18 629 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 BAIAP2L1Q9UHR4 511 aa12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-201ENST00000356183 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 LRCH2Q5VUJ6 765 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 MPRIPQ6WCQ1 1025 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 USP37Q86T82 979 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 USH1CQ9Y6N9 552 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 ANKRD24Q8TF21 1146 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 SBNO2Q9Y2G9 1366 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 OPHN1O60890 802 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 CCDC38Q502W7 563 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 GPR161Q8N6U8 529 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 PLEKHA4Q9H4M7 779 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 ITIH3Q06033 890 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 ZBTB21Q9ULJ3 1066 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 ABCC5O15440 1437 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 NAPAP54920 295 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 VSIG1Q86XK7 387 aa12.38□□□□□ -0.43
GTF3C1-201ENST00000356183 GAS8O95995 478 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 IMPG2Q9BZV3 1241 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 SLC4A4Q9Y6R1 1079 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 INF2Q27J81 1249 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 PPP1R42Q7Z4L9 355 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 PEX19P40855 299 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 KRT23Q9C075 422 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 DMTNQ08495 405 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 LEO1Q8WVC0 666 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 STX8Q9UNK0 236 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 ESYT1Q9BSJ8 1104 aa12.37□□□□□ -0.43
GTF3C1-201ENST00000356183 GOLGA6BA6NDN3 693 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 SIRT1Q96EB6 747 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 FAM170AA1A519 330 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 ARHGAP25P42331 645 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 PARD3Q8TEW0 1356 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 ZGPATQ8N5A5 531 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 MICAL1Q8TDZ2 1067 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 COG7P83436 770 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 APOBRQ0VD83 1088 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 PPP2R5DQ14738 602 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 WHAMMP3Q1A5X7 153 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 TAOK1Q7L7X3 1001 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 IFT20Q8IY31 132 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 BANK1Q8NDB2 785 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 VPS16Q9H269 839 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 HHATQ5VTY9 493 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-201ENST00000356183 C16orf71Q8IYS4 520 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 CXorf38Q8TB03 319 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 INTS4Q96HW7 963 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 IL16Q14005 1332 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 BMP15O95972 392 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 BCL2L12Q9HB09 334 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 ATP2B3Q16720 1220 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 KLHL7Q8IXQ5 586 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 CRNKL1Q9BZJ0 848 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 SPOPO43791 374 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 ZNF365Q70YC5 407 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 KIFC2Q96AC6 838 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 FRMD4BQ9Y2L6 1034 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 SESN3P58005 492 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 HAUS7Q99871 368 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 SMIM24O75264 130 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 BAG3O95817 575 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 HLA-DOAP06340 250 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
GTF3C1-201ENST00000356183 CABS1Q96KC9 395 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms