RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 Q6ZUG5 572 aa20.41■□□□□ 0.86
VPS13B-201ENST00000355155 SP8Q8IXZ3 490 aa20.41■□□□□ 0.86
VPS13B-201ENST00000355155 GTF3C6Q969F1 213 aa20.41■□□□□ 0.86
VPS13B-201ENST00000355155 AIDAQ96BJ3 306 aa20.41■□□□□ 0.86
VPS13B-201ENST00000355155 ANAPC4Q9UJX5 808 aa20.41■□□□□ 0.86
VPS13B-201ENST00000355155 WTIPA6NIX2 430 aaPredicted RBP20.41■□□□□ 0.86
VPS13B-201ENST00000355155 GSG1L2A8MUP6 293 aa20.41■□□□□ 0.86
VPS13B-201ENST00000355155 TTLL5Q6EMB2 1281 aa20.41■□□□□ 0.86
VPS13B-201ENST00000355155 RIOK1Q9BRS2 568 aaKnown RBP20.41■□□□□ 0.86
VPS13B-201ENST00000355155 EPB41L4AQ9HCS5 686 aaPredicted RBP20.41■□□□□ 0.86
VPS13B-201ENST00000355155 A0A0G2JLW4 131 aa20.4■□□□□ 0.86
VPS13B-201ENST00000355155 ZNF213O14771 459 aa20.4■□□□□ 0.86
VPS13B-201ENST00000355155 KLRK1P26718 216 aa20.4■□□□□ 0.86
VPS13B-201ENST00000355155 CCDC24Q8N4L8 307 aa20.4■□□□□ 0.86
VPS13B-201ENST00000355155 IL1R1P14778 569 aa20.4■□□□□ 0.86
VPS13B-201ENST00000355155 SKOR2Q2VWA4 1001 aaPredicted RBP20.4■□□□□ 0.86
VPS13B-201ENST00000355155 IFNL3Q8IZI9 196 aa20.4■□□□□ 0.86
VPS13B-201ENST00000355155 NCOA7Q8NI08 942 aa20.4■□□□□ 0.86
VPS13B-201ENST00000355155 SMARCC2Q8TAQ2 1214 aa20.4■□□□□ 0.86
VPS13B-201ENST00000355155 MBD4O95243 580 aa20.39■□□□□ 0.85
VPS13B-201ENST00000355155 ZNF384Q8TF68 577 aa20.39■□□□□ 0.85
VPS13B-201ENST00000355155 LRP2BPQ9P2M1 347 aa20.39■□□□□ 0.85
VPS13B-201ENST00000355155 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.85
VPS13B-201ENST00000355155 NID2Q14112 1375 aa20.39■□□□□ 0.85
VPS13B-201ENST00000355155 NPHP1O15259 732 aa20.39■□□□□ 0.85
VPS13B-201ENST00000355155 NPR1P16066 1061 aa20.39■□□□□ 0.85
VPS13B-201ENST00000355155 GPSM2P81274 684 aa20.39■□□□□ 0.85
VPS13B-201ENST00000355155 NSUN4Q96CB9 384 aaKnown RBP20.39■□□□□ 0.85
VPS13B-201ENST00000355155 ZNF646O15015 1829 aaPredicted RBP20.38■□□□□ 0.85
VPS13B-201ENST00000355155 DDX60LQ5H9U9 1706 aaKnown RBP20.38■□□□□ 0.85
VPS13B-201ENST00000355155 NT5C2P49902 561 aa20.38■□□□□ 0.85
VPS13B-201ENST00000355155 SPTY2D1Q68D10 685 aaPredicted RBP20.38■□□□□ 0.85
VPS13B-201ENST00000355155 CCDC83Q8IWF9 413 aa20.38■□□□□ 0.85
VPS13B-201ENST00000355155 SRGNP10124 158 aa20.38■□□□□ 0.85
VPS13B-201ENST00000355155 VPS37DQ86XT2 251 aa20.38■□□□□ 0.85
VPS13B-201ENST00000355155 WDR66Q8TBY9 1149 aa20.38■□□□□ 0.85
VPS13B-201ENST00000355155 MCM5P33992 734 aa20.37■□□□□ 0.85
VPS13B-201ENST00000355155 PDE6BP35913 854 aa20.37■□□□□ 0.85
VPS13B-201ENST00000355155 STAG1Q8WVM7 1258 aa20.37■□□□□ 0.85
VPS13B-201ENST00000355155 KIF13BQ9NQT8 1826 aa20.37■□□□□ 0.85
VPS13B-201ENST00000355155 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
VPS13B-201ENST00000355155 ZNF804AQ7Z570 1209 aa20.37■□□□□ 0.85
VPS13B-201ENST00000355155 LCORLQ8N3X6 602 aa20.37■□□□□ 0.85
VPS13B-201ENST00000355155 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
VPS13B-201ENST00000355155 FGRP09769 529 aa20.36■□□□□ 0.85
VPS13B-201ENST00000355155 ANTXR2P58335 489 aa20.36■□□□□ 0.85
VPS13B-201ENST00000355155 TXNRD3Q86VQ6 643 aa20.36■□□□□ 0.85
VPS13B-201ENST00000355155 FOCADQ5VW36 1801 aa20.36■□□□□ 0.85
VPS13B-201ENST00000355155 PCP11498 1178 aaKnown RBP20.36■□□□□ 0.85
VPS13B-201ENST00000355155 CYP7A1P22680 504 aa20.36■□□□□ 0.85
VPS13B-201ENST00000355155 SLC15A2Q16348 729 aa20.36■□□□□ 0.85
VPS13B-201ENST00000355155 ADGRA1Q86SQ6 560 aa20.36■□□□□ 0.85
VPS13B-201ENST00000355155 TMEM87AQ8NBN3 555 aa20.36■□□□□ 0.85
VPS13B-201ENST00000355155 ZSCAN22P10073 491 aaPredicted RBP20.35■□□□□ 0.85
VPS13B-201ENST00000355155 GJB2P29033 226 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 TBC1D10CQ8IV04 446 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 ARMT1Q9H993 441 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 MAGEB6P1A0A0J9YX57 407 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 GOLGA6L22H0YM25 854 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 STX6O43752 255 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 SYT1P21579 422 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 CNNM2Q9H8M5 875 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 GGA1Q9UJY5 639 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 FAM205AQ6ZU69 1335 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 PDCP20941 246 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 CERS3Q8IU89 383 aa20.35■□□□□ 0.85
VPS13B-201ENST00000355155 CDK5RAP2Q96SN8 1893 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 ALDH1B1P30837 517 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 TMEM87BQ96K49 555 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 PARP3Q9Y6F1 533 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 MYH15Q9Y2K3 1946 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 PPEF1O14829 653 aaPredicted RBP20.34■□□□□ 0.85
VPS13B-201ENST00000355155 TRAK2O60296 914 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 STYK1Q6J9G0 422 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 NAA16Q6N069 864 aaPredicted RBP20.34■□□□□ 0.85
VPS13B-201ENST00000355155 BRF1Q92994 677 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 ANKIB1Q9P2G1 1089 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 MTMR6Q9Y217 621 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
VPS13B-201ENST00000355155 TBC1D16Q8TBP0 767 aa20.33■□□□□ 0.85
VPS13B-201ENST00000355155 LMBRD1Q9NUN5 540 aa20.33■□□□□ 0.85
VPS13B-201ENST00000355155 RAI14Q9P0K7 980 aa20.33■□□□□ 0.85
VPS13B-201ENST00000355155 MECOMQ03112 1051 aa20.33■□□□□ 0.84
VPS13B-201ENST00000355155 MASTLQ96GX5 879 aa20.33■□□□□ 0.84
VPS13B-201ENST00000355155 TCEANC2Q96MN5 208 aa20.33■□□□□ 0.84
VPS13B-201ENST00000355155 NAPBQ9H115 298 aa20.33■□□□□ 0.84
VPS13B-201ENST00000355155 SLC4A4Q9Y6R1 1079 aa20.33■□□□□ 0.84
VPS13B-201ENST00000355155 EP400Q96L91 3159 aa20.32■□□□□ 0.84
VPS13B-201ENST00000355155 PDIA3P30101 505 aaKnown RBP20.32■□□□□ 0.84
VPS13B-201ENST00000355155 PPP4CP60510 307 aa20.32■□□□□ 0.84
VPS13B-201ENST00000355155 SCRN1Q12765 414 aa20.32■□□□□ 0.84
VPS13B-201ENST00000355155 NECAB1Q8N987 351 aa20.32■□□□□ 0.84
VPS13B-201ENST00000355155 PRC1O43663 620 aa20.32■□□□□ 0.84
VPS13B-201ENST00000355155 SGMS1Q86VZ5 419 aa20.32■□□□□ 0.84
VPS13B-201ENST00000355155 LARP6Q9BRS8 491 aaKnown RBP20.32■□□□□ 0.84
VPS13B-201ENST00000355155 KRT23Q9C075 422 aa20.32■□□□□ 0.84
VPS13B-201ENST00000355155 CD209Q9NNX6 404 aa20.32■□□□□ 0.84
VPS13B-201ENST00000355155 MMP10P09238 476 aa20.31■□□□□ 0.84
VPS13B-201ENST00000355155 RCAN1P53805 252 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms