RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TEX14Q8IWB6 1497 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 VWA3AA6NCI4 1184 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 LMBR1Q8WVP7 490 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 GUCA1BQ9UMX6 200 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 CTAGE9A4FU28 777 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 KRT83P78385 493 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 DCAF17Q5H9S7 520 aaPredicted RBP14.93□□□□□ -0.02
SCN8A-202ENST00000355133 PPM1EQ8WY54 764 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 ARMT1Q9H993 441 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 MAP3K19Q56UN5 1328 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 B4E1Z4 1266 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 PKNOX2Q96KN3 472 aa14.93□□□□□ -0.02
SCN8A-202ENST00000355133 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
SCN8A-202ENST00000355133 A0A1B0GUL7 405 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 SREK1Q8WXA9 508 aaKnown RBP14.92□□□□□ -0.02
SCN8A-202ENST00000355133 A0A1W2PP64 1363 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 HARSP12081 509 aaKnown RBP14.92□□□□□ -0.02
SCN8A-202ENST00000355133 RAPGEF1Q13905 1077 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 MCM6Q14566 821 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 C8orf34Q49A92 452 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 BRAPQ7Z569 592 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 DDX21Q9NR30 783 aaKnown RBP eCLIP14.92□□□□□ -0.02
SCN8A-202ENST00000355133 HELLSQ9NRZ9 838 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 ATP10BO94823 1461 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 CHMP2AO43633 222 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 KLHDC4Q8TBB5 520 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 LZTFL1Q9NQ48 299 aa14.92□□□□□ -0.02
SCN8A-202ENST00000355133 KRT86O43790 486 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 PRIM1P49642 420 aaKnown RBP14.91□□□□□ -0.02
SCN8A-202ENST00000355133 C6orf163Q5TEZ5 329 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
SCN8A-202ENST00000355133 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 IFNKQ9P0W0 207 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 HIBADHP31937 336 aaKnown RBP14.91□□□□□ -0.02
SCN8A-202ENST00000355133 CCDC63Q8NA47 563 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 PRIMPOLQ96LW4 560 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 CARD14Q9BXL6 1004 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 CALCOCO1Q9P1Z2 691 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 FCHSD1Q86WN1 690 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 ZNF594Q96JF6 807 aaPredicted RBP14.91□□□□□ -0.02
SCN8A-202ENST00000355133 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.91□□□□□ -0.02
SCN8A-202ENST00000355133 V9GYY5 206 aaPredicted RBP14.91□□□□□ -0.02
SCN8A-202ENST00000355133 IQUBQ8NA54 791 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 RAPGEF6Q8TEU7 1601 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 CCDC77Q9BR77 488 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 LMTK3Q96Q04 1460 aa14.91□□□□□ -0.02
SCN8A-202ENST00000355133 MXRA7P84157 204 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 ZNF518AQ6AHZ1 1483 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 NUP160Q12769 1436 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 RAD50Q92878 1312 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 A0A1B0GVL5 298 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 PLBD2Q8NHP8 589 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 PARD3Q8TEW0 1356 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 EYA2O00167 538 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 SV2BQ7L1I2 683 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 FBF1Q8TES7 1133 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 ARFGAP3Q9NP61 516 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 KIF4AO95239 1232 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 ZYXQ15942 572 aaKnown RBP14.9□□□□□ -0.02
SCN8A-202ENST00000355133 SMIM23A6NLE4 172 aa14.9□□□□□ -0.02
SCN8A-202ENST00000355133 BIN2Q9UBW5 565 aaPredicted RBP14.9□□□□□ -0.02
SCN8A-202ENST00000355133 PTPRKQ15262 1439 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 TRAPPC8Q9Y2L5 1435 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 TAF12Q16514 161 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 TNNI3KQ59H18 835 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 CCDC24Q8N4L8 307 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 FPGT-TNNI3KV9GXZ4 949 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 ATP2A1O14983 1001 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 PUM3Q15397 648 aaKnown RBP14.89□□□□□ -0.03
SCN8A-202ENST00000355133 ZNF569Q5MCW4 686 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 XAGE2Q96GT9 111 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 PPP1R9BQ96SB3 815 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 ATP6V0A2Q9Y487 856 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 CEP83Q9Y592 693 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
SCN8A-202ENST00000355133 CCT6AP40227 531 aaKnown RBP14.89□□□□□ -0.03
SCN8A-202ENST00000355133 METTL22Q9BUU2 404 aaPredicted RBP14.89□□□□□ -0.03
SCN8A-202ENST00000355133 TAF5LO75529 589 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 SELENOSQ9BQE4 189 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 DBNDD2Q9BQY9 259 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 USP26Q9BXU7 913 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 SH2D4AQ9H788 454 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 CTNND2Q9UQB3 1225 aa14.89□□□□□ -0.03
SCN8A-202ENST00000355133 PRDM1O75626 825 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 CCDC65Q8IXS2 484 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 ZNF408Q9H9D4 720 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 KRT5P13647 590 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 PIK3AP1Q6ZUJ8 805 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 PICK1Q9NRD5 415 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 GGA1Q9UJY5 639 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 TRPM2O94759 1503 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 BIRC3Q13489 604 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 SH3TC1Q8TE82 1336 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 ZFYVE9O95405 1425 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 TRAF5O00463 557 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 DYNC1I1O14576 645 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 MSANTD4Q8NCY6 345 aa14.88□□□□□ -0.03
SCN8A-202ENST00000355133 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.88□□□□□ -0.03
SCN8A-202ENST00000355133 IFT81Q8WYA0 676 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms