RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ANKRD18BA2A2Z9 1011 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 B4E1Z4 1266 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 SPTLC2O15270 562 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 PHKA1P46020 1223 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 MYSM1Q5VVJ2 828 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 ADALQ6DHV7 355 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 GIGYF2Q6Y7W6 1299 aaKnown RBP22.78■■□□□ 1.24
COL13A1-201ENST00000354547 TBC1D10CQ8IV04 446 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 CYB5R4Q7L1T6 521 aa22.77■■□□□ 1.24
COL13A1-201ENST00000354547 MAP3K15Q6ZN16 1313 aa22.77■■□□□ 1.24
COL13A1-201ENST00000354547 NBPF3Q9H094 633 aa22.77■■□□□ 1.24
COL13A1-201ENST00000354547 ABCC6O95255 1503 aa22.77■■□□□ 1.24
COL13A1-201ENST00000354547 CAVIN2O95810 425 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 GNL2Q13823 731 aaKnown RBP22.76■■□□□ 1.23
COL13A1-201ENST00000354547 DPCR1Q3MIW9 517 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 ATL3Q6DD88 541 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 TRMT1Q9NXH9 659 aaKnown RBP22.76■■□□□ 1.23
COL13A1-201ENST00000354547 WWC3Q9ULE0 1092 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 ZNF532Q9HCE3 1301 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 ZBTB1Q9Y2K1 713 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 GTF2F1P35269 517 aaKnown RBP eCLIP22.76■■□□□ 1.23
COL13A1-201ENST00000354547 CTSWP56202 376 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 NFXL1Q6ZNB6 911 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 MTERF4Q7Z6M4 381 aaKnown RBP22.76■■□□□ 1.23
COL13A1-201ENST00000354547 LRRC8AQ8IWT6 810 aa22.76■■□□□ 1.23
COL13A1-201ENST00000354547 USP27XA6NNY8 438 aa22.75■■□□□ 1.23
COL13A1-201ENST00000354547 UBE2Q2LH0YL09 131 aa22.75■■□□□ 1.23
COL13A1-201ENST00000354547 ADD2P35612 726 aa22.75■■□□□ 1.23
COL13A1-201ENST00000354547 EVCP57679 992 aa22.75■■□□□ 1.23
COL13A1-201ENST00000354547 TRIM28Q13263 835 aaKnown RBP22.75■■□□□ 1.23
COL13A1-201ENST00000354547 CHMP4CQ96CF2 233 aa22.75■■□□□ 1.23
COL13A1-201ENST00000354547 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
COL13A1-201ENST00000354547 METAP2P50579 478 aaKnown RBP eCLIP22.74■■□□□ 1.23
COL13A1-201ENST00000354547 ALG1Q9BT22 464 aa22.74■■□□□ 1.23
COL13A1-201ENST00000354547 PRDM10Q9NQV6 1147 aa22.74■■□□□ 1.23
COL13A1-201ENST00000354547 SKILP12757 684 aa22.74■■□□□ 1.23
COL13A1-201ENST00000354547 CCDC102BQ68D86 513 aa22.74■■□□□ 1.23
COL13A1-201ENST00000354547 SLC4A9Q96Q91 983 aa22.74■■□□□ 1.23
COL13A1-201ENST00000354547 RIC1Q4ADV7 1423 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 KCNG4Q8TDN1 519 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 TOMM22Q9NS69 142 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 KIAA1468Q9P260 1216 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 ANGEL1Q9UNK9 670 aaKnown RBP22.73■■□□□ 1.23
COL13A1-201ENST00000354547 NWD2Q9ULI1 1742 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 CCDC69A6NI79 296 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 ZNF202O95125 648 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 SMC2O95347 1197 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 KIF23Q02241 960 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-201ENST00000354547 ANO1Q5XXA6 986 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 AIDAQ96BJ3 306 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 TEX13AQ9BXU3 409 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-201ENST00000354547 NAT10Q9H0A0 1025 aaKnown RBP22.73■■□□□ 1.23
COL13A1-201ENST00000354547 FBXO3Q9UK99 471 aa22.73■■□□□ 1.23
COL13A1-201ENST00000354547 PARP4Q9UKK3 1724 aaKnown RBP22.73■■□□□ 1.23
COL13A1-201ENST00000354547 CDC27P30260 824 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 NAA30Q147X3 362 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-201ENST00000354547 PPP4R3BQ5MIZ7 849 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 CCDC82Q8N4S0 544 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 MRFAP1L1Q96HT8 127 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 PLA2G12BQ9BX93 195 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 TNS2Q63HR2 1409 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 PLEKHG2Q9H7P9 1386 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 SLC3A2P08195 630 aaKnown RBP22.72■■□□□ 1.23
COL13A1-201ENST00000354547 PDE6AP16499 860 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 CTDSPL2Q05D32 466 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 SARM1Q6SZW1 724 aa22.72■■□□□ 1.23
COL13A1-201ENST00000354547 PDE8BO95263 885 aa22.71■■□□□ 1.23
COL13A1-201ENST00000354547 RRP12Q5JTH9 1297 aaKnown RBP22.71■■□□□ 1.23
COL13A1-201ENST00000354547 TICAM2Q86XR7 235 aa22.71■■□□□ 1.23
COL13A1-201ENST00000354547 POLR3EQ9NVU0 708 aa22.71■■□□□ 1.23
COL13A1-201ENST00000354547 SOS2Q07890 1332 aaPredicted RBP22.71■■□□□ 1.23
COL13A1-201ENST00000354547 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
COL13A1-201ENST00000354547 WDHD1O75717 1129 aaPredicted RBP22.71■■□□□ 1.23
COL13A1-201ENST00000354547 PFKFB1P16118 471 aa22.71■■□□□ 1.23
COL13A1-201ENST00000354547 CBX1P83916 185 aa22.71■■□□□ 1.23
COL13A1-201ENST00000354547 BRAPQ7Z569 592 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 VPS37DQ86XT2 251 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 FBXL16Q8N461 479 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 NEDD4P46934 1319 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 A0A1W2PQ27 194 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 A0A1W2PQ64 194 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 A0A1W2PQD8 194 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 CDC25BP30305 580 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 KRT40Q6A162 431 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 ZKSCAN3Q9BRR0 538 aa22.7■■□□□ 1.22
COL13A1-201ENST00000354547 ZNF335Q9H4Z2 1342 aaPredicted RBP22.7■■□□□ 1.22
COL13A1-201ENST00000354547 MYH15Q9Y2K3 1946 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 SPDYE4A6NLX3 237 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 YEATS4O95619 227 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 DZIP3Q86Y13 1208 aaKnown RBP22.69■■□□□ 1.22
COL13A1-201ENST00000354547 MAGEB6Q8N7X4 407 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 IFNKQ9P0W0 207 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 TMEM67Q5HYA8 995 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 APOA5Q6Q788 366 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 PDCL2Q8N4E4 241 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 CLIC6Q96NY7 704 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 CCDC94Q9BW85 323 aaPredicted RBP22.69■■□□□ 1.22
COL13A1-201ENST00000354547 ARMT1Q9H993 441 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 MROH7-TTC4A0A0A0MT08 1334 aa22.69■■□□□ 1.22
COL13A1-201ENST00000354547 CYP19A1P11511 503 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms