RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 NPAS4Q8IUM7 802 aa10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 POP1Q99575 1024 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 ZKSCAN3Q9BRR0 538 aa10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 SHANK2Q9UPX8 1470 aa10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 ROCK1Q13464 1354 aa10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 A0A1W2PP55 124 aa10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 PPM1GO15355 546 aaPredicted RBP10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 POLR3DP05423 398 aaPredicted RBP10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 IRX6P78412 446 aaPredicted RBP10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 NXPE3Q969Y0 559 aa10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 CCDC74AQ96AQ1 378 aa10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 BHLHE41Q9C0J9 482 aaPredicted RBP10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 LATS2Q9NRM7 1088 aa10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 TRIM33Q9UPN9 1127 aa10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 WDR7Q9Y4E6 1490 aa10.17□□□□□ -0.78
UBE2D3-204ENST00000349311 ANKRD33BA6NCL7 494 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 TM4SF5O14894 197 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 FAM50AQ14320 339 aaKnown RBP10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 OSMRQ99650 979 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 PLVAPQ9BX97 442 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 SAMD9LQ8IVG5 1584 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 MAST1Q9Y2H9 1570 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 ADGRL2O95490 1459 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 DAPK1P53355 1430 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 PTPRKQ15262 1439 aa10.16□□□□□ -0.78
UBE2D3-204ENST00000349311 RNF225M0QZC1 329 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-204ENST00000349311 SMNDC1O75940 238 aaKnown RBP eCLIP10.15□□□□□ -0.783e-7■■□□□ 11.4
UBE2D3-204ENST00000349311 ERCC3P19447 782 aa10.15□□□□□ -0.78
UBE2D3-204ENST00000349311 HHIPQ96QV1 700 aa10.15□□□□□ -0.78
UBE2D3-204ENST00000349311 TCF12Q99081 682 aa10.15□□□□□ -0.78
UBE2D3-204ENST00000349311 TRPA1O75762 1119 aa10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 P4HBP07237 508 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 GLIPR1L2Q4G1C9 344 aa10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 CEP135Q66GS9 1140 aa10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 ALYREFQ86V81 257 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 NPHS2Q9NP85 383 aa10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 ABCC5O15440 1437 aa10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 NAIPQ13075 1403 aa10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 CFAP74Q9C0B2 1584 aa10.14□□□□□ -0.79
UBE2D3-204ENST00000349311 PDE2AO00408 941 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-204ENST00000349311 CCNJLQ8IV13 435 aa10.13□□□□□ -0.79
UBE2D3-204ENST00000349311 DTWD1Q8N5C7 304 aa10.13□□□□□ -0.79
UBE2D3-204ENST00000349311 GLIS3Q8NEA6 775 aa10.13□□□□□ -0.79
UBE2D3-204ENST00000349311 NOP53Q9NZM5 478 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-204ENST00000349311 SOX13Q9UN79 622 aa10.13□□□□□ -0.79
UBE2D3-204ENST00000349311 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
UBE2D3-204ENST00000349311 ZBED9Q6R2W3 1325 aa10.12□□□□□ -0.79
UBE2D3-204ENST00000349311 PNMA6FA0A0J9YX94 578 aa10.12□□□□□ -0.79
UBE2D3-204ENST00000349311 FBF1Q8TES7 1133 aa10.12□□□□□ -0.79
UBE2D3-204ENST00000349311 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-204ENST00000349311 PLCH2O75038 1416 aa10.12□□□□□ -0.79
UBE2D3-204ENST00000349311 PLXNC1O60486 1568 aa10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 A0A0A0MRY4 1105 aa10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 IRS1P35568 1242 aa10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 GDF6Q6KF10 455 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 PRPF40BQ6NWY9 871 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 FBXO33Q7Z6M2 555 aa10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 DMRTC2Q8IXT2 367 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 EPS8L3Q8TE67 593 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 PKNOX2Q96KN3 472 aa10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 ABCC1P33527 1531 aa10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 ARHGAP5Q13017 1502 aa10.11□□□□□ -0.79
UBE2D3-204ENST00000349311 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 ASXL2Q76L83 1435 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 RASSF7Q02833 373 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 TMCO4Q5TGY1 634 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 WFDC8Q8IUA0 241 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 IL22RA1Q8N6P7 574 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 SETDB2Q96T68 719 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 MUC3BQ9H195 1237 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 TONSLQ96HA7 1378 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 CCDC141Q6ZP82 1450 aa10.1□□□□□ -0.79
UBE2D3-204ENST00000349311 SMG6Q86US8 1419 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-204ENST00000349311 EIF5BO60841 1220 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-204ENST00000349311 DEAF1O75398 565 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-204ENST00000349311 CDC27P30260 824 aa10.09□□□□□ -0.79
UBE2D3-204ENST00000349311 MAPK8P45983 427 aa10.09□□□□□ -0.79
UBE2D3-204ENST00000349311 ALG1LQ6GMV1 187 aa10.09□□□□□ -0.79
UBE2D3-204ENST00000349311 FMR1NBQ8N0W7 255 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-204ENST00000349311 GLI2P10070 1586 aa10.09□□□□□ -0.79
UBE2D3-204ENST00000349311 CNTLNQ9NXG0 1405 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 SPDYE3A6NKU9 549 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 NEFMP07197 916 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 PTPRAP18433 802 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 EPHA1P21709 976 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 GRIA4P48058 902 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 SETDB1Q15047 1291 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 TRAPPC3LQ5T215 181 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 PI16Q6UXB8 463 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 VN1R5Q7Z5H4 357 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 FBXO11Q86XK2 927 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 BSNDQ8WZ55 320 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 LIN7BQ9HAP6 207 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 SRA1Q9HD15 236 aaKnown RBP10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
UBE2D3-204ENST00000349311 NCOA1Q15788 1441 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms