RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 PSMD6Q15008 389 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 NOP9Q86U38 636 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 CNPY2Q9Y2B0 182 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 GNAT2P19087 354 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 SYT1P21579 422 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 CHST3Q7LGC8 479 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 TSGA10Q9BZW7 698 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 FEZ2Q9UHY8 353 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
CACNA1C-204ENST00000347598 DDX39AO00148 427 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 ERCC3P19447 782 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 GNA11P29992 359 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 ZYXQ15942 572 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 STMN2Q93045 179 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 ARFGAP3Q9NP61 516 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 ZEB2O60315 1214 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 CALCOCO2Q13137 446 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 KARSQ15046 597 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 GTF3C6Q969F1 213 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 CSRNP2Q9H175 543 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 SAMD15Q9P1V8 674 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 MRPS27Q92552 414 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 ZNF830Q96NB3 372 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 GPR161Q8N6U8 529 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 SUPT6HQ7KZ85 1726 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 INTS8Q75QN2 995 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 SLC39A6Q13433 755 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 MICALL1Q8N3F8 863 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
CACNA1C-204ENST00000347598 SPOPO43791 374 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 TNFAIP3P21580 790 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 RPL13P26373 211 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 FAM83GA6ND36 823 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 COPS6Q7L5N1 327 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 FCHSD1Q86WN1 690 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 ANKRD2Q9GZV1 360 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 TTC22Q5TAA0 569 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 LIN9Q5TKA1 542 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 EAPPQ56P03 285 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 SV2BQ7L1I2 683 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 RBM8AQ9Y5S9 174 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 ZNF569Q5MCW4 686 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 TCEANC2Q96MN5 208 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 ANKFY1Q9P2R3 1169 aa13.36□□□□□ -0.27
CACNA1C-204ENST00000347598 GKAP1Q5VSY0 366 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 EIF6P56537 245 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 CTNND2Q9UQB3 1225 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 KRT19P08727 400 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 ATP5DP30049 168 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 ZSCAN23Q3MJ62 389 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 NAP1L4Q99733 375 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 ZKSCAN3Q9BRR0 538 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 CALUO43852 315 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 SKILP12757 684 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 GTF2A1P52655 376 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 FYB2Q5VWT5 728 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 NKIRAS1Q9NYS0 192 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 KIF3CO14782 793 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 XRCC6P12956 609 aaKnown RBP eCLIP13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-204ENST00000347598 SPDYE16A6NNV3 312 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 CCNT1O60563 726 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 IVLP07476 585 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 VIMP08670 466 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 RXRAP19793 462 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 TNNC1P63316 161 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 FAM160A1Q05DH4 1040 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 DIXDC1Q155Q3 683 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 SRGAP1Q7Z6B7 1085 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 ABL1P00519 1130 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 RHOXF2BP0C7M4 288 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 CASC4Q6P4E1 433 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 RHPN1Q8TCX5 695 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 RHOXF2Q9BQY4 288 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 MED10Q9BTT4 135 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 LZTFL1Q9NQ48 299 aa13.34□□□□□ -0.27
CACNA1C-204ENST00000347598 STK32BQ9NY57 414 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms