RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ERO1AQ96HE7 468 aa15.53■□□□□ 0.08
SGCA-202ENST00000344627 WNK4Q96J92 1243 aa15.53■□□□□ 0.08
SGCA-202ENST00000344627 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
SGCA-202ENST00000344627 IQSEC3Q9UPP2 1182 aaPredicted RBP15.53■□□□□ 0.08
SGCA-202ENST00000344627 CLRN2A0PK11 232 aa15.52■□□□□ 0.08
SGCA-202ENST00000344627 TESPA1A2RU30 521 aaPredicted RBP15.52■□□□□ 0.08
SGCA-202ENST00000344627 API5Q9BZZ5 524 aaKnown RBP15.52■□□□□ 0.08
SGCA-202ENST00000344627 VEZTQ9HBM0 779 aa15.52■□□□□ 0.08
SGCA-202ENST00000344627 TTF2Q9UNY4 1162 aaKnown RBP15.52■□□□□ 0.08
SGCA-202ENST00000344627 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.08
SGCA-202ENST00000344627 MAST3O60307 1309 aa15.51■□□□□ 0.07
SGCA-202ENST00000344627 WDHD1O75717 1129 aaPredicted RBP15.51■□□□□ 0.07
SGCA-202ENST00000344627 PRPF38BQ5VTL8 546 aaKnown RBP15.51■□□□□ 0.07
SGCA-202ENST00000344627 HDAC5Q9UQL6 1122 aa15.51■□□□□ 0.07
SGCA-202ENST00000344627 USP2O75604 605 aaPredicted RBP15.5■□□□□ 0.07
SGCA-202ENST00000344627 PDE8BO95263 885 aa15.5■□□□□ 0.07
SGCA-202ENST00000344627 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
SGCA-202ENST00000344627 SOX10P56693 466 aa15.5■□□□□ 0.07
SGCA-202ENST00000344627 MKRN3Q13064 507 aaKnown RBP15.5■□□□□ 0.07
SGCA-202ENST00000344627 NBPF12Q5TAG4 269 aaPredicted RBP15.5■□□□□ 0.07
SGCA-202ENST00000344627 FKBP1CQ5VVH2 108 aa15.5■□□□□ 0.07
SGCA-202ENST00000344627 FBXO33Q7Z6M2 555 aa15.5■□□□□ 0.07
SGCA-202ENST00000344627 ZNF70Q9UC06 446 aaPredicted RBP15.5■□□□□ 0.07
SGCA-202ENST00000344627 IFIT1P09914 478 aaKnown RBP15.49■□□□□ 0.07
SGCA-202ENST00000344627 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
SGCA-202ENST00000344627 DZIP1LQ8IYY4 767 aaKnown RBP15.49■□□□□ 0.07
SGCA-202ENST00000344627 SIL1Q9H173 461 aa15.49■□□□□ 0.07
SGCA-202ENST00000344627 ZCCHC17Q9NP64 241 aaKnown RBP15.49■□□□□ 0.07
SGCA-202ENST00000344627 FBXO3Q9UK99 471 aa15.49■□□□□ 0.07
SGCA-202ENST00000344627 ECM29Q5VYK3 1845 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 EYA2O00167 538 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 CRKP46108 304 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 BCAMP50895 628 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 PUM3Q15397 648 aaKnown RBP15.48■□□□□ 0.07
SGCA-202ENST00000344627 FAM83AQ86UY5 434 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 MIER1Q8N108 512 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 TEKT1Q969V4 418 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 TMOD2Q9NZR1 351 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 CSADQ9Y600 493 aa15.48■□□□□ 0.07
SGCA-202ENST00000344627 SSC5DA1L4H1 1573 aa15.47■□□□□ 0.07
SGCA-202ENST00000344627 ZBTB22O15209 634 aa15.47■□□□□ 0.07
SGCA-202ENST00000344627 SLC5A1P13866 664 aa15.47■□□□□ 0.07
SGCA-202ENST00000344627 GTF2A2P52657 109 aa15.47■□□□□ 0.07
SGCA-202ENST00000344627 MAP3K9P80192 1104 aa15.47■□□□□ 0.07
SGCA-202ENST00000344627 VGLL2Q8N8G2 317 aa15.47■□□□□ 0.07
SGCA-202ENST00000344627 FRAT1Q92837 279 aaPredicted RBP15.47■□□□□ 0.07
SGCA-202ENST00000344627 GCC1Q96CN9 775 aa15.47■□□□□ 0.07
SGCA-202ENST00000344627 FZD1Q9UP38 647 aa15.47■□□□□ 0.07
SGCA-202ENST00000344627 LRRFIP2Q9Y608 721 aaKnown RBP15.47■□□□□ 0.07
SGCA-202ENST00000344627 IGF2BP3O00425 579 aaKnown RBP eCLIP15.46■□□□□ 0.07
SGCA-202ENST00000344627 IPO8O15397 1037 aaKnown RBP15.46■□□□□ 0.07
SGCA-202ENST00000344627 RFX5P48382 616 aaPredicted RBP15.46■□□□□ 0.07
SGCA-202ENST00000344627 HNRNPUQ00839 825 aaKnown RBP eCLIP15.46■□□□□ 0.07
SGCA-202ENST00000344627 SP3Q02447 781 aa15.46■□□□□ 0.07
SGCA-202ENST00000344627 CLMNQ96JQ2 1002 aa15.46■□□□□ 0.07
SGCA-202ENST00000344627 ZDHHC15Q96MV8 337 aa15.46■□□□□ 0.07
SGCA-202ENST00000344627 TDRD3Q9H7E2 651 aaKnown RBP15.46■□□□□ 0.07
SGCA-202ENST00000344627 CEP126Q9P2H0 1117 aa15.46■□□□□ 0.07
SGCA-202ENST00000344627 TRIM17Q9Y577 477 aa15.46■□□□□ 0.07
SGCA-202ENST00000344627 HHIPL2Q6UWX4 724 aa15.45■□□□□ 0.06
SGCA-202ENST00000344627 OTOP1Q7RTM1 612 aa15.45■□□□□ 0.06
SGCA-202ENST00000344627 WDR66Q8TBY9 1149 aa15.45■□□□□ 0.06
SGCA-202ENST00000344627 LPIN2Q92539 896 aa15.45■□□□□ 0.06
SGCA-202ENST00000344627 OPTNQ96CV9 577 aa15.45■□□□□ 0.06
SGCA-202ENST00000344627 TEPSINQ96N21 525 aa15.45■□□□□ 0.06
SGCA-202ENST00000344627 MEIS3Q99687 375 aa15.45■□□□□ 0.06
SGCA-202ENST00000344627 ZFYVE28Q9HCC9 887 aa15.45■□□□□ 0.06
SGCA-202ENST00000344627 AOX1Q06278 1338 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 LAMB1P07942 1786 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 TCP10L2B9ZVM9 353 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 GNRH1P01148 92 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 FGFR2P21802 821 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 GRIK5Q16478 980 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 DCAF15Q66K64 600 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.44■□□□□ 0.06
SGCA-202ENST00000344627 ARHGAP45Q92619 1136 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 EFCC1Q9HA90 598 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 PA2G4Q9UQ80 394 aaKnown RBP15.44■□□□□ 0.06
SGCA-202ENST00000344627 PTPN22Q9Y2R2 807 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 MYH13Q9UKX3 1938 aa15.44■□□□□ 0.06
SGCA-202ENST00000344627 BCAR3O75815 825 aa15.43■□□□□ 0.06
SGCA-202ENST00000344627 GNAI3P08754 354 aa15.43■□□□□ 0.06
SGCA-202ENST00000344627 CRHR2Q13324 411 aa15.43■□□□□ 0.06
SGCA-202ENST00000344627 ATG9AQ7Z3C6 839 aa15.43■□□□□ 0.06
SGCA-202ENST00000344627 NBPF11Q86T75 865 aa15.43■□□□□ 0.06
SGCA-202ENST00000344627 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
SGCA-202ENST00000344627 MS4A4AQ96JQ5 239 aa15.43■□□□□ 0.06
SGCA-202ENST00000344627 R3HDMLQ9H3Y0 253 aa15.43■□□□□ 0.06
SGCA-202ENST00000344627 RPAP1Q9BWH6 1393 aaPredicted RBP15.43■□□□□ 0.06
SGCA-202ENST00000344627 SPDYE5A6NIY4 337 aa15.42■□□□□ 0.06
SGCA-202ENST00000344627 CIAO1O76071 339 aa15.42■□□□□ 0.06
SGCA-202ENST00000344627 CETPP11597 493 aa15.42■□□□□ 0.06
SGCA-202ENST00000344627 PRMT2P55345 433 aa15.42■□□□□ 0.06
SGCA-202ENST00000344627 ATP2B3Q16720 1220 aa15.42■□□□□ 0.06
SGCA-202ENST00000344627 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.42■□□□□ 0.06
SGCA-202ENST00000344627 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
SGCA-202ENST00000344627 ARMC5Q96C12 935 aa15.42■□□□□ 0.06
SGCA-202ENST00000344627 ELP3Q9H9T3 547 aa15.42■□□□□ 0.06
SGCA-202ENST00000344627 GNL3LQ9NVN8 582 aaKnown RBP15.42■□□□□ 0.06
SGCA-202ENST00000344627 ARAP2Q8WZ64 1704 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms