RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 RCAN3Q9UKA8 241 aa19.87■□□□□ 0.77
ATG4B-201ENST00000344376 A0A1B0GUL7 405 aa19.87■□□□□ 0.77
ATG4B-201ENST00000344376 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-201ENST00000344376 PHKA1P46020 1223 aa19.87■□□□□ 0.77
ATG4B-201ENST00000344376 MVPQ14764 893 aaKnown RBP19.87■□□□□ 0.77
ATG4B-201ENST00000344376 GRIK5Q16478 980 aa19.87■□□□□ 0.77
ATG4B-201ENST00000344376 COL13A1Q5TAT6 717 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-201ENST00000344376 PANK1Q8TE04 598 aa19.87■□□□□ 0.77
ATG4B-201ENST00000344376 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
ATG4B-201ENST00000344376 ZNF70Q9UC06 446 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-201ENST00000344376 UBE2Q2LH0YL09 131 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 CA12O43570 354 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 SLC10A3P09131 477 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 ADORA1P30542 326 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 ATP8B2P98198 1209 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 OS9Q13438 667 aaPredicted RBP19.86■□□□□ 0.77
ATG4B-201ENST00000344376 POLA2Q14181 598 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 SUPT20HL1Q3ZLR7 823 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 CCDC102BQ68D86 513 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 MRIQ9BWK5 157 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 TDRD3Q9H7E2 651 aaKnown RBP19.86■□□□□ 0.77
ATG4B-201ENST00000344376 ECM29Q5VYK3 1845 aa19.86■□□□□ 0.77
ATG4B-201ENST00000344376 FAM155AB1AL88 458 aaPredicted RBP19.85■□□□□ 0.77
ATG4B-201ENST00000344376 TNNI2P48788 182 aa19.85■□□□□ 0.77
ATG4B-201ENST00000344376 TIMM10P62072 90 aa19.85■□□□□ 0.77
ATG4B-201ENST00000344376 MOB2Q70IA6 237 aa19.85■□□□□ 0.77
ATG4B-201ENST00000344376 ZGPATQ8N5A5 531 aaKnown RBP19.85■□□□□ 0.77
ATG4B-201ENST00000344376 SSH3Q8TE77 659 aa19.85■□□□□ 0.77
ATG4B-201ENST00000344376 XAGE2Q96GT9 111 aa19.85■□□□□ 0.77
ATG4B-201ENST00000344376 NEUROD6Q96NK8 337 aa19.85■□□□□ 0.77
ATG4B-201ENST00000344376 PRDM10Q9NQV6 1147 aa19.85■□□□□ 0.77
ATG4B-201ENST00000344376 TMOD2Q9NZR1 351 aa19.85■□□□□ 0.77
ATG4B-201ENST00000344376 ZBTB22O15209 634 aa19.84■□□□□ 0.77
ATG4B-201ENST00000344376 PPP1R12BO60237 982 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-201ENST00000344376 PRKG1Q13976 671 aa19.84■□□□□ 0.77
ATG4B-201ENST00000344376 RASA3Q14644 834 aa19.84■□□□□ 0.77
ATG4B-201ENST00000344376 GORABQ5T7V8 394 aa19.84■□□□□ 0.77
ATG4B-201ENST00000344376 RASAL3Q86YV0 1011 aa19.84■□□□□ 0.77
ATG4B-201ENST00000344376 ZDHHC15Q96MV8 337 aa19.84■□□□□ 0.77
ATG4B-201ENST00000344376 AOX1Q06278 1338 aa19.84■□□□□ 0.77
ATG4B-201ENST00000344376 LDHBP07195 334 aaKnown RBP19.83■□□□□ 0.77
ATG4B-201ENST00000344376 LBX1P52954 281 aa19.83■□□□□ 0.77
ATG4B-201ENST00000344376 HHIPL2Q6UWX4 724 aa19.83■□□□□ 0.77
ATG4B-201ENST00000344376 ANGEL1Q9UNK9 670 aaKnown RBP19.83■□□□□ 0.77
ATG4B-201ENST00000344376 SALL1Q9NSC2 1324 aa19.83■□□□□ 0.77
ATG4B-201ENST00000344376 MYH13Q9UKX3 1938 aa19.83■□□□□ 0.76
ATG4B-201ENST00000344376 HSPA8P11142 646 aaKnown RBP19.83■□□□□ 0.76
ATG4B-201ENST00000344376 PDS5AQ29RF7 1337 aaKnown RBP19.82■□□□□ 0.76
ATG4B-201ENST00000344376 SURF6O75683 361 aaKnown RBP19.82■□□□□ 0.76
ATG4B-201ENST00000344376 KIF23Q02241 960 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-201ENST00000344376 REM2Q8IYK8 340 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-201ENST00000344376 TNS4Q8IZW8 715 aa19.82■□□□□ 0.76
ATG4B-201ENST00000344376 ZIC5Q96T25 663 aa19.82■□□□□ 0.76
ATG4B-201ENST00000344376 CHMP4BQ9H444 224 aaKnown RBP19.82■□□□□ 0.76
ATG4B-201ENST00000344376 TCP10L2B9ZVM9 353 aa19.81■□□□□ 0.76
ATG4B-201ENST00000344376 RASGRF1Q13972 1273 aa19.81■□□□□ 0.76
ATG4B-201ENST00000344376 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.81■□□□□ 0.76
ATG4B-201ENST00000344376 DDX19BQ9UMR2 479 aa19.81■□□□□ 0.76
ATG4B-201ENST00000344376 PRDX5P30044 214 aa19.8■□□□□ 0.76
ATG4B-201ENST00000344376 NBPF12Q5TAG4 269 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-201ENST00000344376 SPTY2D1Q68D10 685 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-201ENST00000344376 GPR108Q9NPR9 543 aa19.8■□□□□ 0.76
ATG4B-201ENST00000344376 IREB2P48200 963 aaKnown RBP19.79■□□□□ 0.76
ATG4B-201ENST00000344376 MAP3K11Q16584 847 aa19.79■□□□□ 0.76
ATG4B-201ENST00000344376 IFFO2Q5TF58 517 aa19.79■□□□□ 0.76
ATG4B-201ENST00000344376 APOBEC3HQ6NTF7 200 aaKnown RBP19.79■□□□□ 0.76
ATG4B-201ENST00000344376 CEP85Q6P2H3 762 aa19.79■□□□□ 0.76
ATG4B-201ENST00000344376 SSC5DA1L4H1 1573 aa19.79■□□□□ 0.76
ATG4B-201ENST00000344376 UNCXA6NJT0 531 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 LDLRAD1Q5T700 205 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 FKBP1CQ5VVH2 108 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 DZIP1Q86YF9 867 aaKnown RBP19.78■□□□□ 0.76
ATG4B-201ENST00000344376 SLF2Q8IX21 1173 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 ABCF2Q9UG63 623 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 COG6Q9Y2V7 657 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 NOP58Q9Y2X3 529 aaKnown RBP19.78■□□□□ 0.76
ATG4B-201ENST00000344376 DAGLAQ9Y4D2 1042 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-201ENST00000344376 DIXDC1Q155Q3 683 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 TNNI3KQ59H18 835 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 TMEM39BQ9GZU3 492 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 SAGE1Q9NXZ1 904 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 FPGT-TNNI3KV9GXZ4 949 aa19.78■□□□□ 0.76
ATG4B-201ENST00000344376 UQCRFS1P1P0C7P4 283 aa19.77■□□□□ 0.76
ATG4B-201ENST00000344376 CACNB3P54284 484 aa19.77■□□□□ 0.76
ATG4B-201ENST00000344376 FAM83AQ86UY5 434 aa19.77■□□□□ 0.76
ATG4B-201ENST00000344376 HOOK2Q96ED9 719 aa19.77■□□□□ 0.76
ATG4B-201ENST00000344376 SLC10A4Q96EP9 437 aa19.77■□□□□ 0.76
ATG4B-201ENST00000344376 TSKSQ9UJT2 592 aa19.77■□□□□ 0.76
ATG4B-201ENST00000344376 FZD1Q9UP38 647 aa19.77■□□□□ 0.76
ATG4B-201ENST00000344376 ARID4AP29374 1257 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-201ENST00000344376 CCDC158Q5M9N0 1113 aa19.76■□□□□ 0.75
ATG4B-201ENST00000344376 ERC1Q8IUD2 1116 aa19.76■□□□□ 0.75
ATG4B-201ENST00000344376 SPATA5Q8NB90 893 aa19.76■□□□□ 0.75
ATG4B-201ENST00000344376 CSRNP1Q96S65 589 aa19.76■□□□□ 0.75
ATG4B-201ENST00000344376 HSP90AB4PQ58FF6 505 aa19.75■□□□□ 0.75
ATG4B-201ENST00000344376 TTC39AQ5SRH9 613 aa19.75■□□□□ 0.75
ATG4B-201ENST00000344376 TEPSINQ96N21 525 aa19.75■□□□□ 0.75
ATG4B-201ENST00000344376 HMG20BQ9P0W2 317 aa19.75■□□□□ 0.75
ATG4B-201ENST00000344376 HMMRO75330 724 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms