RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.41□□□□□ -0.42
RPL28-201ENST00000344063 PRR36Q9H6K5 1346 aa12.41□□□□□ -0.42
RPL28-201ENST00000344063 LMTK2Q8IWU2 1503 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 LRRC8AQ8IWT6 810 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 RMND1Q9NWS8 449 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 CTDP1Q9Y5B0 961 aaPredicted RBP12.4□□□□□ -0.42
RPL28-201ENST00000344063 A0A0D9SFI3 127 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 TRIM75PA6NK02 468 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 SEC31AO94979 1220 aaKnown RBP12.4□□□□□ -0.42
RPL28-201ENST00000344063 SSBP05455 408 aaKnown RBP eCLIP12.4□□□□□ -0.42
RPL28-201ENST00000344063 CCDC175P0C221 793 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 SMC1AQ14683 1233 aaKnown RBP12.4□□□□□ -0.42
RPL28-201ENST00000344063 CT47A1Q5JQC4 288 aaPredicted RBP12.4□□□□□ -0.42
RPL28-201ENST00000344063 APPBP2Q92624 585 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 MAP4K1Q92918 833 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 DSCC1Q9BVC3 393 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 XPO4Q9C0E2 1151 aaKnown RBP12.4□□□□□ -0.42
RPL28-201ENST00000344063 SEC63Q9UGP8 760 aaKnown RBP12.4□□□□□ -0.42
RPL28-201ENST00000344063 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 EXOC5O00471 708 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 USO1O60763 962 aaKnown RBP12.4□□□□□ -0.42
RPL28-201ENST00000344063 GNAT2P19087 354 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 UBA7P41226 1012 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 ANO1Q5XXA6 986 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 DZIP1Q86YF9 867 aaKnown RBP12.4□□□□□ -0.42
RPL28-201ENST00000344063 ZHX3Q9H4I2 956 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 IMPACTQ9P2X3 320 aa12.4□□□□□ -0.42
RPL28-201ENST00000344063 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 RAB34Q9BZG1 259 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 SLC4A4Q9Y6R1 1079 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 CEP152O94986 1710 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 KCNQ3O43525 872 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 PTPN21Q16825 1174 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 BAG1Q99933 345 aaPredicted RBP12.39□□□□□ -0.43
RPL28-201ENST00000344063 IQGAP1P46940 1657 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 ERLIN2O94905 339 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 PDE4BQ07343 736 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 CCDC152Q4G0S7 254 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 BICDL1Q6ZP65 573 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 NBPF11Q86T75 865 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
RPL28-201ENST00000344063 KRI1Q8N9T8 703 aaKnown RBP12.39□□□□□ -0.43
RPL28-201ENST00000344063 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 CTAGE9A4FU28 777 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
RPL28-201ENST00000344063 FANCCQ00597 558 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
RPL28-201ENST00000344063 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 GDAP1L1Q96MZ0 367 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 TCP11L1Q9NUJ3 509 aa12.39□□□□□ -0.43
RPL28-201ENST00000344063 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 ZEB2O60315 1214 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 RXRAP19793 462 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 GUCA1BQ9UMX6 200 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 PLEKHG1Q9ULL1 1385 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPL28-201ENST00000344063 EBAG9O00559 213 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 CYP7A1P22680 504 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 FBXO38Q6PIJ6 1188 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 TAF4BQ92750 862 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 ZNF496Q96IT1 587 aaPredicted RBP12.38□□□□□ -0.43
RPL28-201ENST00000344063 CCDC113Q9H0I3 377 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 IQSEC2Q5JU85 1478 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 ROBO2Q9HCK4 1378 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 TSPY2A6NKD2 308 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 PAFAH1B1P43034 410 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 TUBB4BP68371 445 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 AMPD3Q01432 767 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 FAM114A1Q8IWE2 563 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 ATRIPQ8WXE1 791 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 TSG101Q99816 390 aa12.38□□□□□ -0.43
RPL28-201ENST00000344063 ANGEL1Q9UNK9 670 aaKnown RBP12.38□□□□□ -0.43
RPL28-201ENST00000344063 TULP4Q9NRJ4 1543 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 ZSCAN20P17040 1043 aaPredicted RBP12.37□□□□□ -0.43
RPL28-201ENST00000344063 MTIF2P46199 727 aaKnown RBP12.37□□□□□ -0.43
RPL28-201ENST00000344063 ADCK5Q3MIX3 580 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 IL2RBP14784 551 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 IFIT1BQ5T764 474 aaKnown RBP12.37□□□□□ -0.43
RPL28-201ENST00000344063 HDXQ7Z353 690 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 CACNA2D4Q7Z3S7 1137 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 CEP112Q8N8E3 955 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 TMEM266Q2M3C6 531 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 LONRF3Q496Y0 759 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 EDC3Q96F86 508 aaKnown RBP12.37□□□□□ -0.43
RPL28-201ENST00000344063 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 POLA2Q14181 598 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 TERF2Q15554 542 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 ZNF274Q96GC6 653 aaPredicted RBP12.37□□□□□ -0.43
RPL28-201ENST00000344063 KAT14Q9H8E8 782 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
RPL28-201ENST00000344063 GOLGA6L7A0A1B0GV03 622 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms