RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 NBPF5PQ86XG9 351 aaPredicted RBP13.68□□□□□ -0.22
SEMA6A-202ENST00000343348 NBPF4Q96M43 638 aa13.68□□□□□ -0.22
SEMA6A-202ENST00000343348 CARD6Q9BX69 1037 aa13.68□□□□□ -0.22
SEMA6A-202ENST00000343348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.68□□□□□ -0.22
SEMA6A-202ENST00000343348 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
SEMA6A-202ENST00000343348 C6orf50Q9HD87 102 aa13.68□□□□□ -0.22
SEMA6A-202ENST00000343348 PPANQ9NQ55 473 aaKnown RBP13.68□□□□□ -0.22
SEMA6A-202ENST00000343348 RRAGDQ9NQL2 400 aaPredicted RBP13.68□□□□□ -0.22
SEMA6A-202ENST00000343348 DHX29Q7Z478 1369 aaKnown RBP13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 WASLO00401 505 aaPredicted RBP13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 PPP2R5CQ13362 524 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 GKAP1Q5VSY0 366 aaPredicted RBP13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 TSGA10Q9BZW7 698 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 PPP2R5DQ14738 602 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 SEL1L2Q5TEA6 688 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 ARHGEF2Q92974 986 aaKnown RBP13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 SPDYE3A6NKU9 549 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 CALCOCO2Q13137 446 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 SNX21Q969T3 373 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 PHF8Q9UPP1 1060 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 GRM8O00222 908 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 PFDN4Q9NQP4 134 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 FAM114A2Q9NRY5 505 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 NKIRAS1Q9NYS0 192 aa13.67□□□□□ -0.22
SEMA6A-202ENST00000343348 NDUFAB1O14561 156 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 PDE1CQ14123 709 aaPredicted RBP13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 PPFIBP2Q8ND30 876 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 ANKRD24Q8TF21 1146 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 CLNS1AP54105 237 aaKnown RBP13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 NOC4LQ9BVI4 516 aaKnown RBP13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 AMOTL2Q9Y2J4 779 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 FMNL3Q8IVF7 1028 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 IGSF22Q8N9C0 903 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 NEDD9Q14511 834 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 CRCPO75575 148 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 SNX16P57768 344 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 CEP120Q8N960 986 aa13.66□□□□□ -0.22
SEMA6A-202ENST00000343348 ZFYP08048 801 aaPredicted RBP13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 BEND3Q5T5X7 828 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 CCDC170Q8IYT3 715 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 VPS52Q8N1B4 723 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 CPSF2Q9P2I0 782 aaKnown RBP13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 MCM9Q9NXL9 1143 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 PTPN23Q9H3S7 1636 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 CCDC141Q6ZP82 1450 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 TRAF5O00463 557 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 SPOPO43791 374 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 TFCP2Q12800 502 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 GOLGA6CA6NDK9 693 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 TXNDC9O14530 226 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 GOLGA6DP0CG33 693 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 KRT28Q7Z3Y7 464 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 KSR1Q8IVT5 923 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 SIRT1Q96EB6 747 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 NAPGQ99747 312 aaPredicted RBP13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 GOLGA6AQ9NYA3 693 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 SAP30BPQ9UHR5 308 aaKnown RBP13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 ARHGEF11O15085 1522 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 ATP8B2P98198 1209 aa13.65□□□□□ -0.22
SEMA6A-202ENST00000343348 ST5P78524 1137 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 INF2Q27J81 1249 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 MAEAQ7L5Y9 396 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 GDAP1L1Q96MZ0 367 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 FEZ2Q9UHY8 353 aaPredicted RBP13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 E7EVH7 732 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 INPP5BP32019 993 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 CWF19L2Q2TBE0 894 aaKnown RBP13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 C8orf74Q6P047 294 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 HS2ST1Q7LGA3 356 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 UTP11Q9Y3A2 253 aaKnown RBP13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 RBM26Q5T8P6 1007 aaKnown RBP13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 MGARPQ8TDB4 240 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 NGLY1Q96IV0 654 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 VEZTQ9HBM0 779 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 MKRN1Q9UHC7 482 aaKnown RBP13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 TROQ12816 1431 aaPredicted RBP13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 CHMP2AO43633 222 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 GMNNO75496 209 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 MYL5Q02045 173 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 KRT24Q2M2I5 525 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 FBXO31Q5XUX0 539 aaPredicted RBP13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 CNGA4Q8IV77 575 aa13.64□□□□□ -0.23
SEMA6A-202ENST00000343348 KLHL7Q8IXQ5 586 aa13.63□□□□□ -0.23
SEMA6A-202ENST00000343348 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
SEMA6A-202ENST00000343348 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
SEMA6A-202ENST00000343348 CCT6BQ92526 530 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms