RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MCM7P33993 719 aa19.67■□□□□ 0.74
SMAD4-201ENST00000342988 MTMR3Q13615 1198 aa19.67■□□□□ 0.74
SMAD4-201ENST00000342988 CCDC122Q5T0U0 273 aa19.67■□□□□ 0.74
SMAD4-201ENST00000342988 IFIT1BQ5T764 474 aaKnown RBP19.67■□□□□ 0.74
SMAD4-201ENST00000342988 ZNF277Q9NRM2 450 aaPredicted RBP19.67■□□□□ 0.74
SMAD4-201ENST00000342988 LMNAP02545 664 aaKnown RBP19.67■□□□□ 0.74
SMAD4-201ENST00000342988 TRIM56Q9BRZ2 755 aaKnown RBP19.67■□□□□ 0.74
SMAD4-201ENST00000342988 CRNKL1Q9BZJ0 848 aaKnown RBP19.67■□□□□ 0.74
SMAD4-201ENST00000342988 KRT5P13647 590 aa19.67■□□□□ 0.74
SMAD4-201ENST00000342988 PHBP35232 272 aa19.67■□□□□ 0.74
SMAD4-201ENST00000342988 LMNB2Q03252 620 aa19.67■□□□□ 0.74
SMAD4-201ENST00000342988 TSPY3P0CV98 308 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 TSPY8P0CW00 308 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 PDXDC1Q6P996 788 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 ASIC1P78348 528 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 EXOSC9Q06265 439 aaKnown RBP19.66■□□□□ 0.74
SMAD4-201ENST00000342988 CASC4Q6P4E1 433 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 COPG1Q9Y678 874 aaKnown RBP19.66■□□□□ 0.74
SMAD4-201ENST00000342988 PPFIA3O75145 1194 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 TRMT1LQ7Z2T5 733 aaKnown RBP19.66■□□□□ 0.74
SMAD4-201ENST00000342988 TMEM57Q8N5G2 664 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 PROCA1Q8NCQ7 364 aaPredicted RBP19.66■□□□□ 0.74
SMAD4-201ENST00000342988 TRIM55Q9BYV6 548 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 TTC4O95801 387 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 TROVE2P10155 538 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMAD4-201ENST00000342988 ATP2B3Q16720 1220 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 GJB2P29033 226 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 SMTNP53814 917 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 ZC3H6P61129 1189 aaKnown RBP19.66■□□□□ 0.74
SMAD4-201ENST00000342988 TRIM14Q14142 442 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 TMTC4Q5T4D3 741 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 GUCA1BQ9UMX6 200 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 ARHGAP5Q13017 1502 aa19.66■□□□□ 0.74
SMAD4-201ENST00000342988 EFCAB14O75071 495 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 CCT2P78371 535 aaKnown RBP19.65■□□□□ 0.74
SMAD4-201ENST00000342988 DUSP27Q5VZP5 1158 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 SPOPO43791 374 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 HIP1RO75146 1068 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 ZKSCAN3Q9BRR0 538 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 SCINQ9Y6U3 715 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 NUB1Q9Y5A7 615 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 SOGA1O94964 1423 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 IPO11Q9UI26 975 aaKnown RBP19.65■□□□□ 0.74
SMAD4-201ENST00000342988 TPX2Q9ULW0 747 aaKnown RBP19.65■□□□□ 0.74
SMAD4-201ENST00000342988 ANKRD30BQ9BXX2 1392 aa19.65■□□□□ 0.74
SMAD4-201ENST00000342988 CDC5LQ99459 802 aaKnown RBP19.65■□□□□ 0.74
SMAD4-201ENST00000342988 NAP1L4Q99733 375 aaKnown RBP19.65■□□□□ 0.74
SMAD4-201ENST00000342988 TRIM6Q9C030 488 aaPredicted RBP19.65■□□□□ 0.74
SMAD4-201ENST00000342988 SLC26A6Q9BXS9 759 aa19.64■□□□□ 0.74
SMAD4-201ENST00000342988 VPS41P49754 854 aa19.64■□□□□ 0.74
SMAD4-201ENST00000342988 ANO6Q4KMQ2 910 aa19.64■□□□□ 0.74
SMAD4-201ENST00000342988 ARHGAP42A6NI28 874 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 GNAT3A8MTJ3 354 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 PDE6AP16499 860 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 ANKRD20A4Q4UJ75 823 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 ANKRD20A8PQ5CZ79 823 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 ANKRD20A2Q5SQ80 823 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 ANKRD20A1Q5TYW2 823 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 MYH9P35579 1960 aaKnown RBP19.64■□□□□ 0.73
SMAD4-201ENST00000342988 MICAL1Q8TDZ2 1067 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 LRGUKQ96M69 825 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 ARHGEF9O43307 516 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 VAT1LQ9HCJ6 419 aa19.64■□□□□ 0.73
SMAD4-201ENST00000342988 SYCE1Q8N0S2 351 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 STK24Q9Y6E0 443 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 MICU3Q86XE3 530 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 NLRP7Q8WX94 980 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 ISM2Q6H9L7 571 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 RLBP1P12271 317 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 PPP2R5DQ14738 602 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 C8orf74Q6P047 294 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 IRX5P78411 483 aaPredicted RBP19.63■□□□□ 0.73
SMAD4-201ENST00000342988 GGNBP2Q9H3C7 697 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 PPP2R5CQ13362 524 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 NOLC1Q14978 699 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMAD4-201ENST00000342988 HAUS1Q96CS2 278 aa19.63■□□□□ 0.73
SMAD4-201ENST00000342988 UBE3BQ7Z3V4 1068 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 CD2APQ9Y5K6 639 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 MYOM3Q5VTT5 1437 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 AFMP43652 599 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 FAM71BQ8TC56 605 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 WTAPQ15007 396 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 ESYT2A0FGR8 921 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 FNBP1Q96RU3 617 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 GSTA1P08263 222 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 GSTA2P09210 222 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 FAM186BQ8IYM0 893 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 BOLA2Q9H3K6 86 aa19.62■□□□□ 0.73
SMAD4-201ENST00000342988 RHOXF2BP0C7M4 288 aa19.61■□□□□ 0.73
SMAD4-201ENST00000342988 JADE1Q6IE81 842 aa19.61■□□□□ 0.73
SMAD4-201ENST00000342988 RHOXF2Q9BQY4 288 aa19.61■□□□□ 0.73
SMAD4-201ENST00000342988 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
SMAD4-201ENST00000342988 SATB2Q9UPW6 733 aa19.61■□□□□ 0.73
SMAD4-201ENST00000342988 USP16Q9Y5T5 823 aa19.61■□□□□ 0.73
SMAD4-201ENST00000342988 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.61■□□□□ 0.73
SMAD4-201ENST00000342988 RAPGEF2Q9Y4G8 1499 aa19.61■□□□□ 0.73
SMAD4-201ENST00000342988 EVI5O60447 810 aa19.61■□□□□ 0.73
SMAD4-201ENST00000342988 PRPF38AQ8NAV1 312 aaKnown RBP19.61■□□□□ 0.73
SMAD4-201ENST00000342988 LRRC23Q53EV4 343 aaPredicted RBP19.61■□□□□ 0.73
SMAD4-201ENST00000342988 CEP19Q96LK0 163 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms