RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 CDC23Q9UJX2 597 aa17.19■□□□□ 0.34
PKN1-202ENST00000342216 NPHP4O75161 1426 aaPredicted RBP17.19■□□□□ 0.34
PKN1-202ENST00000342216 ZNF202O95125 648 aa17.19■□□□□ 0.34
PKN1-202ENST00000342216 USP8P40818 1118 aa17.19■□□□□ 0.34
PKN1-202ENST00000342216 BIRC2Q13490 618 aa17.19■□□□□ 0.34
PKN1-202ENST00000342216 MAP9Q49MG5 647 aa17.19■□□□□ 0.34
PKN1-202ENST00000342216 GSPT2Q8IYD1 628 aaKnown RBP17.19■□□□□ 0.34
PKN1-202ENST00000342216 ZMYND10O75800 440 aa17.19■□□□□ 0.34
PKN1-202ENST00000342216 CHGBP05060 677 aa17.19■□□□□ 0.34
PKN1-202ENST00000342216 NAIF1Q69YI7 327 aaPredicted RBP17.19■□□□□ 0.34
PKN1-202ENST00000342216 CLASRPQ8N2M8 674 aaKnown RBP17.19■□□□□ 0.34
PKN1-202ENST00000342216 TC2NQ8N9U0 490 aa17.19■□□□□ 0.34
PKN1-202ENST00000342216 EDC3Q96F86 508 aaKnown RBP17.19■□□□□ 0.34
PKN1-202ENST00000342216 RICTORQ6R327 1708 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 GOLGA6L9A6NEM1 432 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 PRPF6O94906 941 aaKnown RBP17.18■□□□□ 0.34
PKN1-202ENST00000342216 SETQ01105 290 aaPredicted RBP17.18■□□□□ 0.34
PKN1-202ENST00000342216 POLA2Q14181 598 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 EIF4A2Q14240 407 aaKnown RBP17.18■□□□□ 0.34
PKN1-202ENST00000342216 NUTM2GQ5VZR2 741 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 CEP112Q8N8E3 955 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 BCAS4Q8TDM0 211 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 ABL1P00519 1130 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 FAM43BQ6ZT52 329 aaPredicted RBP17.18■□□□□ 0.34
PKN1-202ENST00000342216 AACSQ86V21 672 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 KIRREL3Q8IZU9 778 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
PKN1-202ENST00000342216 CDC5LQ99459 802 aaKnown RBP17.18■□□□□ 0.34
PKN1-202ENST00000342216 BOLA2Q9H3K6 86 aa17.18■□□□□ 0.34
PKN1-202ENST00000342216 CTDNEP1O95476 244 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 MYL5Q02045 173 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
PKN1-202ENST00000342216 NCAPH2Q6IBW4 605 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 CPLX3Q8WVH0 158 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 FAM107BQ9H098 131 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
PKN1-202ENST00000342216 ACBD3Q9H3P7 528 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.17■□□□□ 0.34
PKN1-202ENST00000342216 CDHR2Q9BYE9 1310 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 ELF1P32519 619 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 MIEF2Q96C03 454 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 EVI5LQ96CN4 794 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 POLD4Q9HCU8 107 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 NCKAP5LQ9HCH0 1330 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 SIGLEC1Q9BZZ2 1709 aa17.17■□□□□ 0.34
PKN1-202ENST00000342216 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 IRF6O14896 467 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 GPTP24298 496 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 ADALQ6DHV7 355 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 CENPHQ9H3R5 247 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 GGCXP38435 758 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 IRAK1P51617 712 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 PNOCQ13519 176 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 IDI1Q13907 227 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 SLC35F6Q8N357 371 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 NEK1Q96PY6 1258 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 CRB1P82279 1406 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 MAP3K5Q99683 1374 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 ACTN3Q08043 901 aaPredicted RBP17.16■□□□□ 0.34
PKN1-202ENST00000342216 GJB4Q9NTQ9 266 aa17.16■□□□□ 0.34
PKN1-202ENST00000342216 CTAGE15A4D2H0 777 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 STX10O60499 249 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 CTAGE8P0CG41 777 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
PKN1-202ENST00000342216 PDE6BP35913 854 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 HSP90AB3PQ58FF7 597 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 CTAGE4Q8IX94 777 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 CTCFLQ8NI51 663 aaPredicted RBP17.15■□□□□ 0.34
PKN1-202ENST00000342216 COG3Q96JB2 828 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 CABS1Q96KC9 395 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 PPP1R12AO14974 1030 aaPredicted RBP17.15■□□□□ 0.34
PKN1-202ENST00000342216 KIF5CO60282 957 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 CCDC175P0C221 793 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 ZKSCAN4Q969J2 545 aaPredicted RBP17.15■□□□□ 0.34
PKN1-202ENST00000342216 FAXDC2Q96IV6 333 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
PKN1-202ENST00000342216 TLR7Q9NYK1 1049 aaKnown RBP17.15■□□□□ 0.34
PKN1-202ENST00000342216 NDUFB9Q9Y6M9 179 aa17.15■□□□□ 0.34
PKN1-202ENST00000342216 IKBKBO14920 756 aa17.14■□□□□ 0.33
PKN1-202ENST00000342216 A1BGP04217 495 aa17.14■□□□□ 0.33
PKN1-202ENST00000342216 PFKFB1P16118 471 aa17.14■□□□□ 0.33
PKN1-202ENST00000342216 RDXP35241 583 aaKnown RBP17.14■□□□□ 0.33
PKN1-202ENST00000342216 LONRF3Q496Y0 759 aa17.14■□□□□ 0.33
PKN1-202ENST00000342216 NAA16Q6N069 864 aaPredicted RBP17.14■□□□□ 0.33
PKN1-202ENST00000342216 RAD9BQ6WBX8 426 aa17.14■□□□□ 0.33
PKN1-202ENST00000342216 WAPLQ7Z5K2 1190 aa17.14■□□□□ 0.33
PKN1-202ENST00000342216 HPCAL4Q9UM19 191 aa17.14■□□□□ 0.33
PKN1-202ENST00000342216 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.33
PKN1-202ENST00000342216 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 TRMT44Q8IYL2 757 aaKnown RBP17.13■□□□□ 0.33
PKN1-202ENST00000342216 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
PKN1-202ENST00000342216 LINC00301Q8NCQ3 95 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 GBP3Q9H0R5 595 aa17.13■□□□□ 0.33
PKN1-202ENST00000342216 DIP2BQ9P265 1576 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms