RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 KIAA2012Q0VF49 1180 aa16.69■□□□□ 0.26
PMS1-201ENST00000342075 TTLL5Q6EMB2 1281 aa16.69■□□□□ 0.26
PMS1-201ENST00000342075 ERICH6Q7L0X2 663 aa16.69■□□□□ 0.26
PMS1-201ENST00000342075 SYT17Q9BSW7 474 aa16.69■□□□□ 0.26
PMS1-201ENST00000342075 CCDC88AQ3V6T2 1871 aa16.69■□□□□ 0.26
PMS1-201ENST00000342075 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
PMS1-201ENST00000342075 RBM8AQ9Y5S9 174 aaKnown RBP16.69■□□□□ 0.26
PMS1-201ENST00000342075 ZNF646O15015 1829 aaPredicted RBP16.68■□□□□ 0.26
PMS1-201ENST00000342075 HSPD1P10809 573 aaKnown RBP16.68■□□□□ 0.26
PMS1-201ENST00000342075 UBE3CQ15386 1083 aa16.68■□□□□ 0.26
PMS1-201ENST00000342075 MYH2Q9UKX2 1941 aa16.68■□□□□ 0.26
PMS1-201ENST00000342075 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
PMS1-201ENST00000342075 SLC4A3P48751 1232 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 NAA16Q6N069 864 aaPredicted RBP16.67■□□□□ 0.26
PMS1-201ENST00000342075 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 LARGE2Q8N3Y3 721 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 PCDHAC2Q9Y5I4 1007 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 RAD17O75943 681 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 LDHBP07195 334 aaKnown RBP16.67■□□□□ 0.26
PMS1-201ENST00000342075 DZIP1Q86YF9 867 aaKnown RBP16.67■□□□□ 0.26
PMS1-201ENST00000342075 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.26
PMS1-201ENST00000342075 SMIM22K7EJ46 135 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 CD2BP2O95400 341 aaKnown RBP16.67■□□□□ 0.26
PMS1-201ENST00000342075 CPA1P15085 419 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 SCNN1DP51172 638 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 WDR66Q8TBY9 1149 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 AIDAQ96BJ3 306 aa16.67■□□□□ 0.26
PMS1-201ENST00000342075 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
PMS1-201ENST00000342075 SDR42E1Q8WUS8 393 aa16.66■□□□□ 0.26
PMS1-201ENST00000342075 PSMD1Q99460 953 aa16.66■□□□□ 0.26
PMS1-201ENST00000342075 PDS5AQ29RF7 1337 aaKnown RBP16.66■□□□□ 0.26
PMS1-201ENST00000342075 HSPA4P34932 840 aa16.66■□□□□ 0.26
PMS1-201ENST00000342075 ADCK5Q3MIX3 580 aa16.66■□□□□ 0.26
PMS1-201ENST00000342075 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
PMS1-201ENST00000342075 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
PMS1-201ENST00000342075 EVX2Q03828 476 aa16.65■□□□□ 0.26
PMS1-201ENST00000342075 STRBPQ96SI9 672 aaKnown RBP16.65■□□□□ 0.26
PMS1-201ENST00000342075 ARFGEF1Q9Y6D6 1849 aa16.65■□□□□ 0.26
PMS1-201ENST00000342075 HAND2P61296 217 aa16.65■□□□□ 0.26
PMS1-201ENST00000342075 SLC4A8Q2Y0W8 1093 aa16.65■□□□□ 0.26
PMS1-201ENST00000342075 KIAA0825Q8IV33 1275 aa16.65■□□□□ 0.26
PMS1-201ENST00000342075 BAZ2AQ9UIF9 1905 aaKnown RBP16.65■□□□□ 0.26
PMS1-201ENST00000342075 MAST2Q6P0Q8 1798 aa16.65■□□□□ 0.26
PMS1-201ENST00000342075 FAM205AQ6ZU69 1335 aa16.65■□□□□ 0.26
PMS1-201ENST00000342075 SALL1Q9NSC2 1324 aa16.65■□□□□ 0.26
PMS1-201ENST00000342075 YBX3P16989 372 aaKnown RBP eCLIP16.64■□□□□ 0.26
PMS1-201ENST00000342075 NECTIN1Q15223 517 aa16.64■□□□□ 0.26
PMS1-201ENST00000342075 UPF3BQ9BZI7 483 aaKnown RBP16.64■□□□□ 0.26
PMS1-201ENST00000342075 EPB41L4AQ9HCS5 686 aaPredicted RBP16.64■□□□□ 0.26
PMS1-201ENST00000342075 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
PMS1-201ENST00000342075 RIOK1Q9BRS2 568 aaKnown RBP16.64■□□□□ 0.25
PMS1-201ENST00000342075 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
PMS1-201ENST00000342075 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.25
PMS1-201ENST00000342075 APPP05067 770 aa16.64■□□□□ 0.25
PMS1-201ENST00000342075 IARSP41252 1262 aaKnown RBP16.64■□□□□ 0.25
PMS1-201ENST00000342075 PODNQ7Z5L7 613 aa16.64■□□□□ 0.25
PMS1-201ENST00000342075 STK11IPQ8N1F8 1099 aa16.64■□□□□ 0.25
PMS1-201ENST00000342075 SLC27A2O14975 620 aa16.63■□□□□ 0.25
PMS1-201ENST00000342075 ANP32AP39687 249 aaKnown RBP16.63■□□□□ 0.25
PMS1-201ENST00000342075 LRRFIP1Q32MZ4 808 aaKnown RBP16.63■□□□□ 0.25
PMS1-201ENST00000342075 DACT2Q5SW24 774 aa16.63■□□□□ 0.25
PMS1-201ENST00000342075 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
PMS1-201ENST00000342075 CYP21A2P08686 494 aa16.63■□□□□ 0.25
PMS1-201ENST00000342075 SUPT20HQ8NEM7 779 aa16.63■□□□□ 0.25
PMS1-201ENST00000342075 TTF2Q9UNY4 1162 aaKnown RBP16.63■□□□□ 0.25
PMS1-201ENST00000342075 FGAP02671 866 aa16.62■□□□□ 0.25
PMS1-201ENST00000342075 NKX2-3Q8TAU0 364 aa16.62■□□□□ 0.25
PMS1-201ENST00000342075 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
PMS1-201ENST00000342075 PSMD14O00487 310 aa16.62■□□□□ 0.25
PMS1-201ENST00000342075 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
PMS1-201ENST00000342075 TCEANC2Q96MN5 208 aa16.62■□□□□ 0.25
PMS1-201ENST00000342075 INCENPQ9NQS7 918 aa16.62■□□□□ 0.25
PMS1-201ENST00000342075 USP17L3A6NCW0 530 aa16.61■□□□□ 0.25
PMS1-201ENST00000342075 USP17L4A6NCW7 530 aa16.61■□□□□ 0.25
PMS1-201ENST00000342075 GSG1L2A8MUP6 293 aa16.61■□□□□ 0.25
PMS1-201ENST00000342075 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
PMS1-201ENST00000342075 USP17L1Q7RTZ2 530 aa16.61■□□□□ 0.25
PMS1-201ENST00000342075 SH3RF3Q8TEJ3 882 aaPredicted RBP16.61■□□□□ 0.25
PMS1-201ENST00000342075 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
PMS1-201ENST00000342075 CYP2D7A0A087X1C5 515 aa16.61■□□□□ 0.25
PMS1-201ENST00000342075 SHTN1A0MZ66 631 aa16.61■□□□□ 0.25
PMS1-201ENST00000342075 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
PMS1-201ENST00000342075 SPTY2D1Q68D10 685 aaPredicted RBP16.61■□□□□ 0.25
PMS1-201ENST00000342075 ZGPATQ8N5A5 531 aaKnown RBP16.61■□□□□ 0.25
PMS1-201ENST00000342075 SOCS7O14512 581 aa16.6■□□□□ 0.25
PMS1-201ENST00000342075 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
PMS1-201ENST00000342075 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
PMS1-201ENST00000342075 STRIP1Q5VSL9 837 aa16.6■□□□□ 0.25
PMS1-201ENST00000342075 NBPF3Q9H094 633 aa16.6■□□□□ 0.25
PMS1-201ENST00000342075 CDK5RAP2Q96SN8 1893 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 BTDP43251 543 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 NIM1KQ8IY84 436 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 TBC1D22AQ8WUA7 517 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 DAGLAQ9Y4D2 1042 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 MROH7-TTC4A0A0A0MT08 1334 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 PSME4Q14997 1843 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 MCCP23508 829 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 IFNL3Q8IZI9 196 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms