RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
TRIM29-201ENST00000341846 CTDSPL2Q05D32 466 aa13.04□□□□□ -0.32
TRIM29-201ENST00000341846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRIM29-201ENST00000341846 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
TRIM29-201ENST00000341846 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
TRIM29-201ENST00000341846 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
TRIM29-201ENST00000341846 AEBP2Q6ZN18 517 aaPredicted RBP13.04□□□□□ -0.32
TRIM29-201ENST00000341846 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
TRIM29-201ENST00000341846 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
TRIM29-201ENST00000341846 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRIM29-201ENST00000341846 RAI14Q9P0K7 980 aa13.04□□□□□ -0.32
TRIM29-201ENST00000341846 B4E1Z4 1266 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
TRIM29-201ENST00000341846 CTNNA3Q9UI47 895 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 MBD3O95983 291 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 RFC4P35249 363 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 EXOSC10Q01780 885 aaKnown RBP13.03□□□□□ -0.32
TRIM29-201ENST00000341846 MAP3K12Q12852 859 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
TRIM29-201ENST00000341846 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
TRIM29-201ENST00000341846 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 ATP6V1DQ9Y5K8 247 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 RFX7Q2KHR2 1363 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 CTDNEP1O95476 244 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 PTMAP06454 111 aaKnown RBP13.03□□□□□ -0.32
TRIM29-201ENST00000341846 UQCRFS1P1P0C7P4 283 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
TRIM29-201ENST00000341846 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
TRIM29-201ENST00000341846 CAMK4Q16566 473 aa13.03□□□□□ -0.32
TRIM29-201ENST00000341846 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.32
TRIM29-201ENST00000341846 SDR42E1Q8WUS8 393 aa13.02□□□□□ -0.32
TRIM29-201ENST00000341846 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.33
TRIM29-201ENST00000341846 ARID4AP29374 1257 aaPredicted RBP13.02□□□□□ -0.33
TRIM29-201ENST00000341846 TRDNQ13061 729 aa13.02□□□□□ -0.33
TRIM29-201ENST00000341846 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.33
TRIM29-201ENST00000341846 TTC6Q86TZ1 520 aa13.02□□□□□ -0.33
TRIM29-201ENST00000341846 LCORLQ8N3X6 602 aa13.02□□□□□ -0.33
TRIM29-201ENST00000341846 GPR101Q96P66 508 aaPredicted RBP13.02□□□□□ -0.33
TRIM29-201ENST00000341846 PDCP20941 246 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 GIMAP6Q6P9H5 292 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
TRIM29-201ENST00000341846 CHMP4CQ96CF2 233 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 NAPBQ9H115 298 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 TAF1P21675 1872 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 CSPP1Q1MSJ5 1256 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 ADGRA1Q86SQ6 560 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 NCOA7Q8NI08 942 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 STRBPQ96SI9 672 aaKnown RBP13.01□□□□□ -0.33
TRIM29-201ENST00000341846 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 MINDY4BA8MYZ0 360 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 CYP7A1P22680 504 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 MCM5P33992 734 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 TDO2P48775 406 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 ANTXR2P58335 489 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 AK7Q96M32 723 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
TRIM29-201ENST00000341846 NRAPQ86VF7 1730 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 COL4A1P02462 1669 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 GOLGA6L4A6NEF3 574 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 ZNF445P59923 1031 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 CYB5R4Q7L1T6 521 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 MICU3Q86XE3 530 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 NARFQ9UHQ1 456 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 PFKFB2O60825 505 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 TRIM37O94972 964 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 KRT85P78386 507 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 ZNF830Q96NB3 372 aaPredicted RBP13□□□□□ -0.33
TRIM29-201ENST00000341846 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
TRIM29-201ENST00000341846 EPB41L4AQ9HCS5 686 aaPredicted RBP13□□□□□ -0.33
TRIM29-201ENST00000341846 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 CPLX1O14810 134 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
TRIM29-201ENST00000341846 UBE3CQ15386 1083 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 TXNRD3Q86VQ6 643 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 SPATA32Q96LK8 384 aa13□□□□□ -0.33
TRIM29-201ENST00000341846 CGNQ9P2M7 1197 aaKnown RBP13□□□□□ -0.33
TRIM29-201ENST00000341846 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
TRIM29-201ENST00000341846 UBE2HP62256 183 aa12.99□□□□□ -0.33
TRIM29-201ENST00000341846 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
TRIM29-201ENST00000341846 LRSAM1Q6UWE0 723 aa12.99□□□□□ -0.33
TRIM29-201ENST00000341846 IFNL3Q8IZI9 196 aa12.99□□□□□ -0.33
TRIM29-201ENST00000341846 C17orf53Q8N3J3 647 aaPredicted RBP12.99□□□□□ -0.33
TRIM29-201ENST00000341846 AIFM3Q96NN9 605 aa12.99□□□□□ -0.33
TRIM29-201ENST00000341846 NEDD4P46934 1319 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms