RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ZAP70P43403 619 aa17.69■□□□□ 0.42
TPM3-208ENST00000341485 PHKA1P46020 1223 aa17.69■□□□□ 0.42
TPM3-208ENST00000341485 E7EWF7 191 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 POLRMTO00411 1230 aaKnown RBP17.68■□□□□ 0.42
TPM3-208ENST00000341485 MCAMP43121 646 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 EN1Q05925 392 aaPredicted RBP17.68■□□□□ 0.42
TPM3-208ENST00000341485 EZH2Q15910 746 aaKnown RBP17.68■□□□□ 0.42
TPM3-208ENST00000341485 KLHL34Q8N239 644 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 NLGN1Q8N2Q7 840 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 AGXT2Q9BYV1 514 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 CCDC39Q9UFE4 941 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 MINPP1Q9UNW1 487 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 ARID4AP29374 1257 aaPredicted RBP17.68■□□□□ 0.42
TPM3-208ENST00000341485 FGD1P98174 961 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 DDR1Q08345 913 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 RESTQ13127 1097 aa17.68■□□□□ 0.42
TPM3-208ENST00000341485 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
TPM3-208ENST00000341485 RPGRQ92834 1020 aaKnown RBP17.68■□□□□ 0.42
TPM3-208ENST00000341485 A0A1B0GUL6 1792 aa17.67■□□□□ 0.42
TPM3-208ENST00000341485 APOBRQ0VD83 1088 aa17.67■□□□□ 0.42
TPM3-208ENST00000341485 TTLL5Q6EMB2 1281 aa17.67■□□□□ 0.42
TPM3-208ENST00000341485 PI16Q6UXB8 463 aa17.67■□□□□ 0.42
TPM3-208ENST00000341485 DDX11Q96FC9 970 aa17.67■□□□□ 0.42
TPM3-208ENST00000341485 LLPHQ9BRT6 129 aaKnown RBP17.67■□□□□ 0.42
TPM3-208ENST00000341485 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
TPM3-208ENST00000341485 ZKSCAN5Q9Y2L8 839 aa17.67■□□□□ 0.42
TPM3-208ENST00000341485 LIG1P18858 919 aa17.67■□□□□ 0.42
TPM3-208ENST00000341485 TTF1Q15361 905 aaPredicted RBP17.67■□□□□ 0.42
TPM3-208ENST00000341485 LEO1Q8WVC0 666 aaPredicted RBP17.67■□□□□ 0.42
TPM3-208ENST00000341485 SCAND2PQ9GZW5 306 aaPredicted RBP17.67■□□□□ 0.42
TPM3-208ENST00000341485 PNPLA7Q6ZV29 1317 aa17.66■□□□□ 0.42
TPM3-208ENST00000341485 FOXP2O15409 715 aa17.66■□□□□ 0.42
TPM3-208ENST00000341485 CTDNEP1O95476 244 aa17.66■□□□□ 0.42
TPM3-208ENST00000341485 GRAPQ13588 217 aa17.66■□□□□ 0.42
TPM3-208ENST00000341485 UBE4AQ14139 1066 aa17.66■□□□□ 0.42
TPM3-208ENST00000341485 NSUN7Q8NE18 718 aaKnown RBP17.66■□□□□ 0.42
TPM3-208ENST00000341485 GRAPLQ8TC17 118 aaPredicted RBP17.66■□□□□ 0.42
TPM3-208ENST00000341485 SPATA32Q96LK8 384 aa17.66■□□□□ 0.42
TPM3-208ENST00000341485 ANKRD2Q9GZV1 360 aa17.66■□□□□ 0.42
TPM3-208ENST00000341485 MYH7P12883 1935 aa17.65■□□□□ 0.42
TPM3-208ENST00000341485 CAMKK2Q96RR4 588 aa17.65■□□□□ 0.42
TPM3-208ENST00000341485 USP25Q9UHP3 1055 aa17.65■□□□□ 0.42
TPM3-208ENST00000341485 ZNF500O60304 480 aaPredicted RBP17.65■□□□□ 0.42
TPM3-208ENST00000341485 ZFYP08048 801 aaPredicted RBP17.65■□□□□ 0.42
TPM3-208ENST00000341485 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
TPM3-208ENST00000341485 STK32BQ9NY57 414 aa17.65■□□□□ 0.42
TPM3-208ENST00000341485 AKAP11Q9UKA4 1901 aa17.65■□□□□ 0.42
TPM3-208ENST00000341485 H3BQV1 296 aa17.64■□□□□ 0.41
TPM3-208ENST00000341485 BCAMP50895 628 aa17.64■□□□□ 0.41
TPM3-208ENST00000341485 WASHC4Q2M389 1173 aa17.64■□□□□ 0.41
TPM3-208ENST00000341485 IFFO2Q5TF58 517 aa17.64■□□□□ 0.41
TPM3-208ENST00000341485 RBM17Q96I25 401 aaKnown RBP17.64■□□□□ 0.41
TPM3-208ENST00000341485 MYH15Q9Y2K3 1946 aa17.64■□□□□ 0.41
TPM3-208ENST00000341485 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 MCM5P33992 734 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 BAG6P46379 1132 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 CAVIN4Q5BKX8 364 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 ZSCAN25Q6NSZ9 544 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 SPATA5Q8NB90 893 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 OFD1O75665 1012 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 CCT2P78371 535 aaKnown RBP17.63■□□□□ 0.41
TPM3-208ENST00000341485 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 APPBP2Q92624 585 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 ZSCAN16Q9H4T2 348 aaPredicted RBP17.63■□□□□ 0.41
TPM3-208ENST00000341485 GNL3LQ9NVN8 582 aaKnown RBP17.63■□□□□ 0.41
TPM3-208ENST00000341485 PARP3Q9Y6F1 533 aa17.63■□□□□ 0.41
TPM3-208ENST00000341485 PDIA3P30101 505 aaKnown RBP17.62■□□□□ 0.41
TPM3-208ENST00000341485 RASGRF1Q13972 1273 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 SLC15A2Q16348 729 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 CRY2Q49AN0 593 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 PGBD1Q96JS3 809 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 NUP62CLQ9H1M0 184 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 NCOA5Q9HCD5 579 aaKnown RBP17.62■□□□□ 0.41
TPM3-208ENST00000341485 SALL1Q9NSC2 1324 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 ADCY5O95622 1261 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 PTMAP06454 111 aaKnown RBP17.62■□□□□ 0.41
TPM3-208ENST00000341485 HMGN5P82970 282 aaKnown RBP17.62■□□□□ 0.41
TPM3-208ENST00000341485 MSL1Q68DK7 614 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 ZNF274Q96GC6 653 aaPredicted RBP17.62■□□□□ 0.41
TPM3-208ENST00000341485 PUS7LQ9H0K6 701 aaKnown RBP17.62■□□□□ 0.41
TPM3-208ENST00000341485 CTNNA3Q9UI47 895 aa17.62■□□□□ 0.41
TPM3-208ENST00000341485 KDM4AO75164 1064 aa17.61■□□□□ 0.41
TPM3-208ENST00000341485 IDH1O75874 414 aaKnown RBP17.61■□□□□ 0.41
TPM3-208ENST00000341485 MMP10P09238 476 aa17.61■□□□□ 0.41
TPM3-208ENST00000341485 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
TPM3-208ENST00000341485 GYG1P46976 350 aa17.61■□□□□ 0.41
TPM3-208ENST00000341485 FOSBP53539 338 aa17.61■□□□□ 0.41
TPM3-208ENST00000341485 NAA16Q6N069 864 aaPredicted RBP17.61■□□□□ 0.41
TPM3-208ENST00000341485 PIH1D3Q9NQM4 214 aaKnown RBP17.61■□□□□ 0.41
TPM3-208ENST00000341485 DACT1Q9NYF0 836 aa17.61■□□□□ 0.41
TPM3-208ENST00000341485 GOLGA6L4A6NEF3 574 aa17.6■□□□□ 0.41
TPM3-208ENST00000341485 FGAP02671 866 aa17.6■□□□□ 0.41
TPM3-208ENST00000341485 HAND2P61296 217 aa17.6■□□□□ 0.41
TPM3-208ENST00000341485 CAMK4Q16566 473 aa17.6■□□□□ 0.41
TPM3-208ENST00000341485 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
TPM3-208ENST00000341485 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
TPM3-208ENST00000341485 GPHNQ9NQX3 736 aaPredicted RBP17.6■□□□□ 0.41
TPM3-208ENST00000341485 ANKIB1Q9P2G1 1089 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms