RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 GGA3Q9NZ52 723 aa16.14■□□□□ 0.17
TUBD1-202ENST00000340993 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
TUBD1-202ENST00000340993 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
TUBD1-202ENST00000340993 DZIP1Q86YF9 867 aaKnown RBP16.13■□□□□ 0.17
TUBD1-202ENST00000340993 GOLIM4O00461 696 aa16.13■□□□□ 0.17
TUBD1-202ENST00000340993 SEMA3EO15041 775 aa16.13■□□□□ 0.17
TUBD1-202ENST00000340993 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
TUBD1-202ENST00000340993 CRKP46108 304 aa16.13■□□□□ 0.17
TUBD1-202ENST00000340993 ZNF280AP59817 542 aaPredicted RBP16.13■□□□□ 0.17
TUBD1-202ENST00000340993 DLGAP5Q15398 846 aa16.13■□□□□ 0.17
TUBD1-202ENST00000340993 ANGEL2Q5VTE6 544 aaKnown RBP16.13■□□□□ 0.17
TUBD1-202ENST00000340993 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
TUBD1-202ENST00000340993 VEZTQ9HBM0 779 aa16.13■□□□□ 0.17
TUBD1-202ENST00000340993 PIH1D3Q9NQM4 214 aaKnown RBP16.13■□□□□ 0.17
TUBD1-202ENST00000340993 LRP2BPQ9P2M1 347 aa16.13■□□□□ 0.17
TUBD1-202ENST00000340993 TRAF5O00463 557 aa16.12■□□□□ 0.17
TUBD1-202ENST00000340993 WNT10BO00744 389 aa16.12■□□□□ 0.17
TUBD1-202ENST00000340993 IDH1O75874 414 aaKnown RBP16.12■□□□□ 0.17
TUBD1-202ENST00000340993 TOMM70O94826 608 aa16.12■□□□□ 0.17
TUBD1-202ENST00000340993 CACNB3P54284 484 aa16.12■□□□□ 0.17
TUBD1-202ENST00000340993 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
TUBD1-202ENST00000340993 LDHDQ86WU2 507 aa16.12■□□□□ 0.17
TUBD1-202ENST00000340993 GLIS2Q9BZE0 524 aaPredicted RBP16.12■□□□□ 0.17
TUBD1-202ENST00000340993 ADM5C9JUS6 153 aa16.11■□□□□ 0.17
TUBD1-202ENST00000340993 PRAMEF18Q5VWM3 479 aa16.11■□□□□ 0.17
TUBD1-202ENST00000340993 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
TUBD1-202ENST00000340993 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
TUBD1-202ENST00000340993 PRMT6Q96LA8 375 aaPredicted RBP16.11■□□□□ 0.17
TUBD1-202ENST00000340993 ZNF408Q9H9D4 720 aa16.11■□□□□ 0.17
TUBD1-202ENST00000340993 CEP350Q5VT06 3117 aa16.11■□□□□ 0.17
TUBD1-202ENST00000340993 MECOMQ03112 1051 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 GPATCH3Q96I76 525 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 TDRD3Q9H7E2 651 aaKnown RBP16.1■□□□□ 0.17
TUBD1-202ENST00000340993 ECM29Q5VYK3 1845 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 CHGBP05060 677 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 MX1P20591 662 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 FKBP1AP62942 108 aaKnown RBP16.1■□□□□ 0.17
TUBD1-202ENST00000340993 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 CHD1LQ86WJ1 897 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 SMC1BQ8NDV3 1235 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 TEKT1Q969V4 418 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 ECHDC1Q9NTX5 307 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 AK9Q5TCS8 1911 aa16.1■□□□□ 0.17
TUBD1-202ENST00000340993 ZGPATQ8N5A5 531 aaKnown RBP16.09■□□□□ 0.17
TUBD1-202ENST00000340993 SPDYE2BA6NHP3 402 aa16.08■□□□□ 0.17
TUBD1-202ENST00000340993 SPDYE6P0CI01 402 aa16.08■□□□□ 0.17
TUBD1-202ENST00000340993 HTRA3P83110 453 aa16.08■□□□□ 0.17
TUBD1-202ENST00000340993 NUCB1Q02818 461 aa16.08■□□□□ 0.17
TUBD1-202ENST00000340993 KRT26Q7Z3Y9 468 aa16.08■□□□□ 0.17
TUBD1-202ENST00000340993 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.17
TUBD1-202ENST00000340993 ZNF384Q8TF68 577 aa16.08■□□□□ 0.17
TUBD1-202ENST00000340993 DCPSQ96C86 337 aaKnown RBP16.08■□□□□ 0.17
TUBD1-202ENST00000340993 DAGLAQ9Y4D2 1042 aa16.08■□□□□ 0.17
TUBD1-202ENST00000340993 SALL1Q9NSC2 1324 aa16.08■□□□□ 0.16
TUBD1-202ENST00000340993 TCP10L2B9ZVM9 353 aa16.08■□□□□ 0.16
TUBD1-202ENST00000340993 SPTY2D1Q68D10 685 aaPredicted RBP16.08■□□□□ 0.16
TUBD1-202ENST00000340993 PAG1Q9NWQ8 432 aa16.08■□□□□ 0.16
TUBD1-202ENST00000340993 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.08■□□□□ 0.16
TUBD1-202ENST00000340993 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.16
TUBD1-202ENST00000340993 MYH7P12883 1935 aa16.07■□□□□ 0.16
TUBD1-202ENST00000340993 DOCK2Q92608 1830 aa16.07■□□□□ 0.16
TUBD1-202ENST00000340993 ATP5JP18859 108 aa16.07■□□□□ 0.16
TUBD1-202ENST00000340993 MAGEB6Q8N7X4 407 aa16.07■□□□□ 0.16
TUBD1-202ENST00000340993 MAST2Q6P0Q8 1798 aa16.07■□□□□ 0.16
TUBD1-202ENST00000340993 PCNTO95613 3336 aa16.06■□□□□ 0.16
TUBD1-202ENST00000340993 MAST3O60307 1309 aa16.06■□□□□ 0.16
TUBD1-202ENST00000340993 MYO1BO43795 1136 aa16.06■□□□□ 0.16
TUBD1-202ENST00000340993 C1QTNF8P60827 252 aa16.06■□□□□ 0.16
TUBD1-202ENST00000340993 NAA16Q6N069 864 aaPredicted RBP16.06■□□□□ 0.16
TUBD1-202ENST00000340993 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
TUBD1-202ENST00000340993 MIGA1Q8NAN2 632 aa16.06■□□□□ 0.16
TUBD1-202ENST00000340993 NSUN4Q96CB9 384 aaKnown RBP16.06■□□□□ 0.16
TUBD1-202ENST00000340993 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
TUBD1-202ENST00000340993 PDS5AQ29RF7 1337 aaKnown RBP16.06■□□□□ 0.16
TUBD1-202ENST00000340993 PDE4AP27815 886 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 BTDP43251 543 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 APOBEC3HQ6NTF7 200 aaKnown RBP16.05■□□□□ 0.16
TUBD1-202ENST00000340993 SULF1Q8IWU6 871 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 HAUS7Q99871 368 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 ZNF70Q9UC06 446 aaPredicted RBP16.05■□□□□ 0.16
TUBD1-202ENST00000340993 CYP7A1P22680 504 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 PDE1AP54750 535 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 PRKG1Q13976 671 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 AATFQ9NY61 560 aaKnown RBP eCLIP16.05■□□□□ 0.16
TUBD1-202ENST00000340993 FZD1Q9UP38 647 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 SUGT1Q9Y2Z0 365 aa16.05■□□□□ 0.16
TUBD1-202ENST00000340993 MROH7-TTC4A0A0A0MT08 1334 aa16.04■□□□□ 0.16
TUBD1-202ENST00000340993 TCP10Q12799 353 aa16.04■□□□□ 0.16
TUBD1-202ENST00000340993 PICALMQ13492 652 aa16.04■□□□□ 0.16
TUBD1-202ENST00000340993 ZBED3Q96IU2 234 aaPredicted RBP16.04■□□□□ 0.16
TUBD1-202ENST00000340993 ZDHHC15Q96MV8 337 aa16.04■□□□□ 0.16
TUBD1-202ENST00000340993 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
TUBD1-202ENST00000340993 SALL3Q9BXA9 1300 aa16.04■□□□□ 0.16
TUBD1-202ENST00000340993 ERC2O15083 957 aa16.03■□□□□ 0.16
TUBD1-202ENST00000340993 DYNLL1P63167 89 aaKnown RBP16.03■□□□□ 0.16
TUBD1-202ENST00000340993 SLC9C2Q5TAH2 1124 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms