RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 TBC1D7Q9P0N9 293 aa13.54□□□□□ -0.24
TPX2-202ENST00000340513 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
TPX2-202ENST00000340513 SETD1BQ9UPS6 1966 aaKnown RBP13.54□□□□□ -0.24
TPX2-202ENST00000340513 MAP2K7O14733 419 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 GSPT1P15170 499 aaKnown RBP13.53□□□□□ -0.24
TPX2-202ENST00000340513 SESN3P58005 492 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 TMF1P82094 1093 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 NANOGNBQ7Z5D8 188 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 PCDHGC5Q9Y5F6 944 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 MEFVO15553 781 aaPredicted RBP13.53□□□□□ -0.24
TPX2-202ENST00000340513 ZNF202O95125 648 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 HSPA4P34932 840 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 TCERG1LQ5VWI1 586 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 POLD4Q9HCU8 107 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 NLRP2Q9NX02 1062 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 BZW2Q9Y6E2 419 aaKnown RBP13.53□□□□□ -0.24
TPX2-202ENST00000340513 GPRASP1Q5JY77 1395 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 AHCYL1O43865 530 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 PDIA5Q14554 519 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 WHAMMP3Q1A5X7 153 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
TPX2-202ENST00000340513 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 CCDC121Q6ZUS5 278 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 BZW1Q7L1Q6 419 aaKnown RBP13.53□□□□□ -0.24
TPX2-202ENST00000340513 CCDC50Q8IVM0 306 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 AFAP1Q8N556 730 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 TMCO5AQ8N6Q1 288 aa13.53□□□□□ -0.24
TPX2-202ENST00000340513 RABL2AQ9UBK7 228 aaPredicted RBP13.53□□□□□ -0.24
TPX2-202ENST00000340513 RNF8O76064 485 aa13.52□□□□□ -0.24
TPX2-202ENST00000340513 ZSCAN22P10073 491 aaPredicted RBP13.52□□□□□ -0.24
TPX2-202ENST00000340513 DESP17661 470 aa13.52□□□□□ -0.24
TPX2-202ENST00000340513 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.24
TPX2-202ENST00000340513 MAP7D1Q3KQU3 841 aa13.52□□□□□ -0.24
TPX2-202ENST00000340513 ATRIPQ8WXE1 791 aa13.52□□□□□ -0.24
TPX2-202ENST00000340513 SSH1Q8WYL5 1049 aa13.52□□□□□ -0.24
TPX2-202ENST00000340513 CUL5Q93034 780 aa13.52□□□□□ -0.24
TPX2-202ENST00000340513 HELLSQ9NRZ9 838 aa13.52□□□□□ -0.24
TPX2-202ENST00000340513 EIF4BP23588 611 aaKnown RBP13.52□□□□□ -0.25
TPX2-202ENST00000340513 ROR2Q01974 943 aaKnown RBP13.52□□□□□ -0.25
TPX2-202ENST00000340513 BEND6Q5SZJ8 279 aaPredicted RBP13.52□□□□□ -0.25
TPX2-202ENST00000340513 ELOA2Q8IYF1 753 aaPredicted RBP13.52□□□□□ -0.25
TPX2-202ENST00000340513 GORASP1Q9BQQ3 440 aa13.52□□□□□ -0.25
TPX2-202ENST00000340513 ANO2Q9NQ90 1003 aa13.52□□□□□ -0.25
TPX2-202ENST00000340513 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
TPX2-202ENST00000340513 NAT2P11245 290 aa13.52□□□□□ -0.25
TPX2-202ENST00000340513 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
TPX2-202ENST00000340513 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
TPX2-202ENST00000340513 MIS18BP1Q6P0N0 1132 aa13.52□□□□□ -0.25
TPX2-202ENST00000340513 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
TPX2-202ENST00000340513 TTC41PQ6P2S7 1318 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 VCAM1P19320 739 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 APBB1IPQ7Z5R6 666 aaPredicted RBP13.51□□□□□ -0.25
TPX2-202ENST00000340513 INCENPQ9NQS7 918 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 GLI2P10070 1586 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 LSM1O15116 133 aaKnown RBP13.51□□□□□ -0.25
TPX2-202ENST00000340513 STX6O43752 255 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 GNAI3P08754 354 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 ABL2P42684 1182 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 HDGFP51858 240 aaKnown RBP13.51□□□□□ -0.25
TPX2-202ENST00000340513 SMTNP53814 917 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 CCDC92Q53HC0 331 aaPredicted RBP13.51□□□□□ -0.25
TPX2-202ENST00000340513 CYB5D1Q6P9G0 228 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 CCDC13Q8IYE1 715 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 TAF4BQ92750 862 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 STAMBPL1Q96FJ0 436 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.51□□□□□ -0.253e-10■■□□□ 11.7
TPX2-202ENST00000340513 TFIP11Q9UBB9 837 aaKnown RBP13.51□□□□□ -0.25
TPX2-202ENST00000340513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
TPX2-202ENST00000340513 FANCAO15360 1455 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 MYL6BP14649 208 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 CTCFP49711 727 aaPredicted RBP13.51□□□□□ -0.25
TPX2-202ENST00000340513 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
TPX2-202ENST00000340513 TTC30AQ86WT1 665 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 OTUD7AQ8TE49 926 aaPredicted RBP13.51□□□□□ -0.25
TPX2-202ENST00000340513 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 HAUS2Q9NVX0 235 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 HYPKQ9NX55 129 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 KDM6BO15054 1643 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 ABCA9Q8IUA7 1624 aa13.51□□□□□ -0.25
TPX2-202ENST00000340513 ARHGAP5Q13017 1502 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 OPA1O60313 960 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 CLTAP09496 248 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 FERP16591 822 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 CHMLP26374 656 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 SYNE3Q6ZMZ3 975 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 CFDP1Q9UEE9 299 aaPredicted RBP13.5□□□□□ -0.25
TPX2-202ENST00000340513 PARP3Q9Y6F1 533 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 CEP104O60308 925 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 SFSWAPQ12872 951 aaKnown RBP13.5□□□□□ -0.25
TPX2-202ENST00000340513 KARSQ15046 597 aaKnown RBP13.5□□□□□ -0.25
TPX2-202ENST00000340513 CCDC80Q76M96 950 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 SMARCC2Q8TAQ2 1214 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 DHX58Q96C10 678 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 ZBTB40Q9NUA8 1239 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 CLCN2P51788 898 aa13.5□□□□□ -0.25
TPX2-202ENST00000340513 IMMTQ16891 758 aaKnown RBP13.5□□□□□ -0.25
TPX2-202ENST00000340513 C14orf80Q86SX3 495 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms