RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 SP3Q02447 781 aa17.46■□□□□ 0.38
UPK3BL1-201ENST00000340457 DZIP1LQ8IYY4 767 aaKnown RBP17.46■□□□□ 0.38
UPK3BL1-201ENST00000340457 SUCLG2Q96I99 432 aa17.46■□□□□ 0.38
UPK3BL1-201ENST00000340457 TEPSINQ96N21 525 aa17.46■□□□□ 0.38
UPK3BL1-201ENST00000340457 LAMB1P07942 1786 aa17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 EN2P19622 333 aaPredicted RBP17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 CHAF1AQ13111 956 aaPredicted RBP17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 TNFAIP1Q13829 316 aa17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 UBE4AQ14139 1066 aa17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 INTS3Q68E01 1043 aaKnown RBP17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 BRI3BPQ8WY22 251 aa17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 MS4A4AQ96JQ5 239 aa17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 SERPINA10Q9UK55 444 aa17.45■□□□□ 0.38
UPK3BL1-201ENST00000340457 CEP290O15078 2479 aa17.44■□□□□ 0.38
UPK3BL1-201ENST00000340457 TESPA1A2RU30 521 aaPredicted RBP17.44■□□□□ 0.38
UPK3BL1-201ENST00000340457 CRKP46108 304 aa17.44■□□□□ 0.38
UPK3BL1-201ENST00000340457 CACNB3P54284 484 aa17.44■□□□□ 0.38
UPK3BL1-201ENST00000340457 VGLL4Q14135 290 aa17.44■□□□□ 0.38
UPK3BL1-201ENST00000340457 KAZALD1Q96I82 304 aa17.44■□□□□ 0.38
UPK3BL1-201ENST00000340457 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
UPK3BL1-201ENST00000340457 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
UPK3BL1-201ENST00000340457 OTUD5Q96G74 571 aa17.43■□□□□ 0.38
UPK3BL1-201ENST00000340457 CCL15-CCL14A0A0B4J2E2 113 aa17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 ALDH1L1O75891 902 aa17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 MYCP01106 439 aaPredicted RBP17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 NBPF7P0C2Y1 421 aaPredicted RBP17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 MAP3K9P80192 1104 aa17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 TAF1CQ15572 869 aaPredicted RBP17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 CCL15Q16663 113 aa17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 ARMC5Q96C12 935 aa17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 RIPOR2Q9Y4F9 1068 aa17.42■□□□□ 0.38
UPK3BL1-201ENST00000340457 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
UPK3BL1-201ENST00000340457 VPS37DQ86XT2 251 aa17.41■□□□□ 0.38
UPK3BL1-201ENST00000340457 FAM43AQ8N2R8 423 aa17.41■□□□□ 0.38
UPK3BL1-201ENST00000340457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.41■□□□□ 0.38
UPK3BL1-201ENST00000340457 FRAT2O75474 233 aaPredicted RBP17.4■□□□□ 0.38
UPK3BL1-201ENST00000340457 ECM2O94769 699 aaPredicted RBP17.4■□□□□ 0.38
UPK3BL1-201ENST00000340457 TNNI2P48788 182 aa17.4■□□□□ 0.38
UPK3BL1-201ENST00000340457 HABP4Q5JVS0 413 aaKnown RBP17.4■□□□□ 0.38
UPK3BL1-201ENST00000340457 FBXO33Q7Z6M2 555 aa17.4■□□□□ 0.38
UPK3BL1-201ENST00000340457 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
UPK3BL1-201ENST00000340457 CSADQ9Y600 493 aa17.4■□□□□ 0.38
UPK3BL1-201ENST00000340457 PTCH2Q9Y6C5 1203 aa17.4■□□□□ 0.38
UPK3BL1-201ENST00000340457 ARAP2Q8WZ64 1704 aa17.39■□□□□ 0.37
UPK3BL1-201ENST00000340457 MROH5Q6ZUA9 1318 aa17.39■□□□□ 0.37
UPK3BL1-201ENST00000340457 GTF2A2P52657 109 aa17.39■□□□□ 0.37
UPK3BL1-201ENST00000340457 METTL24Q5JXM2 366 aa17.39■□□□□ 0.37
UPK3BL1-201ENST00000340457 KLHDC4Q8TBB5 520 aa17.39■□□□□ 0.37
UPK3BL1-201ENST00000340457 GCC1Q96CN9 775 aa17.39■□□□□ 0.37
UPK3BL1-201ENST00000340457 ZFYVE28Q9HCC9 887 aa17.39■□□□□ 0.37
UPK3BL1-201ENST00000340457 BCAMP50895 628 aa17.38■□□□□ 0.37
UPK3BL1-201ENST00000340457 SLC9C1Q4G0N8 1177 aa17.38■□□□□ 0.37
UPK3BL1-201ENST00000340457 ZKSCAN4Q969J2 545 aaPredicted RBP17.38■□□□□ 0.37
UPK3BL1-201ENST00000340457 ZNF333Q96JL9 665 aa17.38■□□□□ 0.37
UPK3BL1-201ENST00000340457 TMEM106CQ9BVX2 250 aa17.38■□□□□ 0.37
UPK3BL1-201ENST00000340457 ARHGAP39Q9C0H5 1083 aa17.38■□□□□ 0.37
UPK3BL1-201ENST00000340457 RBBP6Q7Z6E9 1792 aaKnown RBP17.38■□□□□ 0.37
UPK3BL1-201ENST00000340457 ZSWIM8A7E2V4 1837 aa17.37■□□□□ 0.37
UPK3BL1-201ENST00000340457 ANKRD44Q8N8A2 993 aa17.37■□□□□ 0.37
UPK3BL1-201ENST00000340457 TEKT1Q969V4 418 aa17.37■□□□□ 0.37
UPK3BL1-201ENST00000340457 WRNIP1Q96S55 665 aa17.37■□□□□ 0.37
UPK3BL1-201ENST00000340457 SNCAIPQ9Y6H5 919 aa17.37■□□□□ 0.37
UPK3BL1-201ENST00000340457 SPDYE5A6NIY4 337 aa17.36■□□□□ 0.37
UPK3BL1-201ENST00000340457 CAVIN4Q5BKX8 364 aa17.36■□□□□ 0.37
UPK3BL1-201ENST00000340457 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
UPK3BL1-201ENST00000340457 BTBD19C9JJ37 291 aa17.35■□□□□ 0.37
UPK3BL1-201ENST00000340457 ANP32CO43423 234 aa17.35■□□□□ 0.37
UPK3BL1-201ENST00000340457 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
UPK3BL1-201ENST00000340457 VGLL2Q8N8G2 317 aa17.35■□□□□ 0.37
UPK3BL1-201ENST00000340457 SH3TC2Q8TF17 1288 aa17.35■□□□□ 0.37
UPK3BL1-201ENST00000340457 TBC1D22AQ8WUA7 517 aa17.35■□□□□ 0.37
UPK3BL1-201ENST00000340457 TRIOBPQ9H2D6 2365 aa17.35■□□□□ 0.37
UPK3BL1-201ENST00000340457 UTYO14607 1347 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 IRF6O14896 467 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 PDE8BO95263 885 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 CETPP11597 493 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 HDLBPQ00341 1268 aaKnown RBP17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 RABL6Q3YEC7 729 aaPredicted RBP17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 APOBEC3HQ6NTF7 200 aaKnown RBP17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 MIGA2Q7L4E1 593 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 NBPF11Q86T75 865 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 ERO1BQ86YB8 467 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 ZDHHC15Q96MV8 337 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 TMOD2Q9NZR1 351 aa17.34■□□□□ 0.37
UPK3BL1-201ENST00000340457 ARHGEF6Q15052 776 aa17.33■□□□□ 0.36
UPK3BL1-201ENST00000340457 TLR2O60603 784 aa17.32■□□□□ 0.36
UPK3BL1-201ENST00000340457 INPP5BP32019 993 aa17.32■□□□□ 0.36
UPK3BL1-201ENST00000340457 LACTBP83111 547 aaPredicted RBP17.32■□□□□ 0.36
UPK3BL1-201ENST00000340457 SNAPC2Q13487 334 aa17.32■□□□□ 0.36
UPK3BL1-201ENST00000340457 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
UPK3BL1-201ENST00000340457 KIF22Q14807 665 aa17.31■□□□□ 0.36
UPK3BL1-201ENST00000340457 FAM83AQ86UY5 434 aa17.31■□□□□ 0.36
UPK3BL1-201ENST00000340457 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
UPK3BL1-201ENST00000340457 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
UPK3BL1-201ENST00000340457 AK9Q5TCS8 1911 aa17.3■□□□□ 0.36
UPK3BL1-201ENST00000340457 TCP10Q12799 353 aa17.3■□□□□ 0.36
UPK3BL1-201ENST00000340457 PPIL2Q13356 520 aa17.3■□□□□ 0.36
UPK3BL1-201ENST00000340457 PUM3Q15397 648 aaKnown RBP17.3■□□□□ 0.36
UPK3BL1-201ENST00000340457 CPA4Q9UI42 421 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms