RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 MRIQ9BWK5 157 aa16.54■□□□□ 0.24
SIRPB3P-201ENST00000340424 PA2G4Q9UQ80 394 aaKnown RBP16.54■□□□□ 0.24
SIRPB3P-201ENST00000340424 TNNQ9UQP3 1299 aa16.54■□□□□ 0.24
SIRPB3P-201ENST00000340424 AKAP2Q9Y2D5 859 aa16.54■□□□□ 0.24
SIRPB3P-201ENST00000340424 SEMA3EO15041 775 aa16.53■□□□□ 0.24
SIRPB3P-201ENST00000340424 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.24
SIRPB3P-201ENST00000340424 CHAF1AQ13111 956 aaPredicted RBP16.53■□□□□ 0.24
SIRPB3P-201ENST00000340424 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
SIRPB3P-201ENST00000340424 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.24
SIRPB3P-201ENST00000340424 ITPRIPQ8IWB1 547 aa16.52■□□□□ 0.24
SIRPB3P-201ENST00000340424 DEFB129Q9H1M3 183 aa16.52■□□□□ 0.24
SIRPB3P-201ENST00000340424 PRDM10Q9NQV6 1147 aa16.52■□□□□ 0.24
SIRPB3P-201ENST00000340424 IQSEC3Q9UPP2 1182 aaPredicted RBP16.52■□□□□ 0.24
SIRPB3P-201ENST00000340424 FOXN1O15353 648 aa16.51■□□□□ 0.23
SIRPB3P-201ENST00000340424 CRKP46108 304 aa16.51■□□□□ 0.23
SIRPB3P-201ENST00000340424 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
SIRPB3P-201ENST00000340424 TEKT1Q969V4 418 aa16.51■□□□□ 0.23
SIRPB3P-201ENST00000340424 PRMT6Q96LA8 375 aaPredicted RBP16.51■□□□□ 0.23
SIRPB3P-201ENST00000340424 DENND2AQ9ULE3 1009 aa16.51■□□□□ 0.23
SIRPB3P-201ENST00000340424 PDS5AQ29RF7 1337 aaKnown RBP16.5■□□□□ 0.23
SIRPB3P-201ENST00000340424 AOC2O75106 756 aa16.5■□□□□ 0.23
SIRPB3P-201ENST00000340424 SLC10A3P09131 477 aa16.5■□□□□ 0.23
SIRPB3P-201ENST00000340424 G3BP1Q13283 466 aaKnown RBP eCLIP16.5■□□□□ 0.23
SIRPB3P-201ENST00000340424 SUPT20HL1Q3ZLR7 823 aa16.5■□□□□ 0.23
SIRPB3P-201ENST00000340424 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
SIRPB3P-201ENST00000340424 SALL1Q9NSC2 1324 aa16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 PNMA6EA0A0J9YXQ4 647 aa16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 UNCXA6NJT0 531 aa16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 FAM155AB1AL88 458 aaPredicted RBP16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 ZBTB7BO15156 539 aaPredicted RBP16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 RLBP1P12271 317 aa16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 TTLL12Q14166 644 aaPredicted RBP16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 MVPQ14764 893 aaKnown RBP16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 HHIPL2Q6UWX4 724 aa16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 ZGPATQ8N5A5 531 aaKnown RBP16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 SSH3Q8TE77 659 aa16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 ZDHHC15Q96MV8 337 aa16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 VEZTQ9HBM0 779 aa16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 SCAF8Q9UPN6 1271 aaKnown RBP16.49■□□□□ 0.23
SIRPB3P-201ENST00000340424 A0A1B0GUL7 405 aa16.48■□□□□ 0.23
SIRPB3P-201ENST00000340424 CLRN2A0PK11 232 aa16.48■□□□□ 0.23
SIRPB3P-201ENST00000340424 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
SIRPB3P-201ENST00000340424 TNNI2P48788 182 aa16.48■□□□□ 0.23
SIRPB3P-201ENST00000340424 ATP8B2P98198 1209 aa16.48■□□□□ 0.23
SIRPB3P-201ENST00000340424 COL13A1Q5TAT6 717 aaPredicted RBP16.48■□□□□ 0.23
SIRPB3P-201ENST00000340424 ZNF70Q9UC06 446 aaPredicted RBP16.48■□□□□ 0.23
SIRPB3P-201ENST00000340424 PCDHAC2Q9Y5I4 1007 aa16.48■□□□□ 0.23
SIRPB3P-201ENST00000340424 TFCP2Q12800 502 aa16.47■□□□□ 0.23
SIRPB3P-201ENST00000340424 MAP3K11Q16584 847 aa16.47■□□□□ 0.23
SIRPB3P-201ENST00000340424 IFFO2Q5TF58 517 aa16.47■□□□□ 0.23
SIRPB3P-201ENST00000340424 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
SIRPB3P-201ENST00000340424 CCDC102BQ68D86 513 aa16.47■□□□□ 0.23
SIRPB3P-201ENST00000340424 CHMP4BQ9H444 224 aaKnown RBP16.47■□□□□ 0.23
SIRPB3P-201ENST00000340424 TMOD2Q9NZR1 351 aa16.47■□□□□ 0.23
SIRPB3P-201ENST00000340424 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
SIRPB3P-201ENST00000340424 HSPA8P11142 646 aaKnown RBP16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 PHKA1P46020 1223 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 TIMM10P62072 90 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 RASA3Q14644 834 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 GRIK5Q16478 980 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 FKBP1CQ5VVH2 108 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 RASAL3Q86YV0 1011 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 XAGE2Q96GT9 111 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 TDRD3Q9H7E2 651 aaKnown RBP16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
SIRPB3P-201ENST00000340424 UBE2Q2LH0YL09 131 aa16.45■□□□□ 0.22
SIRPB3P-201ENST00000340424 LDHBP07195 334 aaKnown RBP16.45■□□□□ 0.22
SIRPB3P-201ENST00000340424 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
SIRPB3P-201ENST00000340424 ADORA1P30542 326 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 IREB2P48200 963 aaKnown RBP16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 LBX1P52954 281 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 KIF23Q02241 960 aaPredicted RBP16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 SPTY2D1Q68D10 685 aaPredicted RBP16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 MOB2Q70IA6 237 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 FAM83AQ86UY5 434 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 PANK1Q8TE04 598 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 DDX19BQ9UMR2 479 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 NOP58Q9Y2X3 529 aaKnown RBP16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 AOX1Q06278 1338 aa16.44■□□□□ 0.22
SIRPB3P-201ENST00000340424 SSC5DA1L4H1 1573 aa16.43■□□□□ 0.22
SIRPB3P-201ENST00000340424 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
SIRPB3P-201ENST00000340424 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
SIRPB3P-201ENST00000340424 RASGRF1Q13972 1273 aa16.43■□□□□ 0.22
SIRPB3P-201ENST00000340424 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
SIRPB3P-201ENST00000340424 SLF2Q8IX21 1173 aa16.43■□□□□ 0.22
SIRPB3P-201ENST00000340424 C1orf115Q9H7X2 142 aa16.43■□□□□ 0.22
SIRPB3P-201ENST00000340424 RPAP1Q9BWH6 1393 aaPredicted RBP16.42■□□□□ 0.22
SIRPB3P-201ENST00000340424 UQCRFS1P1P0C7P4 283 aa16.42■□□□□ 0.22
SIRPB3P-201ENST00000340424 PRDX5P30044 214 aa16.42■□□□□ 0.22
SIRPB3P-201ENST00000340424 NBPF12Q5TAG4 269 aaPredicted RBP16.42■□□□□ 0.22
SIRPB3P-201ENST00000340424 CEP85Q6P2H3 762 aa16.42■□□□□ 0.22
SIRPB3P-201ENST00000340424 TCP10L2B9ZVM9 353 aa16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 ARID4AP29374 1257 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms