RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FGRP09769 529 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 EVCP57679 992 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 SCARF1Q14162 830 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 NACAP1Q9BZK3 213 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 CNNM2Q9H8M5 875 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 CD209Q9NNX6 404 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 ATP8A2Q9NTI2 1148 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 CCDC178Q5BJE1 867 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
NUP43-201ENST00000340413 STRBPQ96SI9 672 aaKnown RBP8.56□□□□□ -1.04
NUP43-201ENST00000340413 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
NUP43-201ENST00000340413 UFL1O94874 794 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 HSPD1P10809 573 aaKnown RBP8.55□□□□□ -1.04
NUP43-201ENST00000340413 BCAMP50895 628 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 FKBP4Q02790 459 aaKnown RBP eCLIP8.55□□□□□ -1.04
NUP43-201ENST00000340413 FAM227BQ96M60 508 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 ZNF532Q9HCE3 1301 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 PTMSP20962 102 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 DDIT3P35638 169 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 IMMTQ16891 758 aaKnown RBP8.55□□□□□ -1.04
NUP43-201ENST00000340413 DPP8Q6V1X1 898 aaPredicted RBP8.55□□□□□ -1.04
NUP43-201ENST00000340413 RUFY3Q7L099 469 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 TTLL6Q8N841 843 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 RNF41Q9H4P4 317 aaPredicted RBP8.55□□□□□ -1.04
NUP43-201ENST00000340413 MYH2Q9UKX2 1941 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 KIAA2012Q0VF49 1180 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 SLC9C2Q5TAH2 1124 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 NSUN4Q96CB9 384 aaKnown RBP8.55□□□□□ -1.04
NUP43-201ENST00000340413 CYP46A1Q9Y6A2 500 aa8.55□□□□□ -1.04
NUP43-201ENST00000340413 MSH5O43196 834 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 GPAA1O43292 621 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 STRIP1Q5VSL9 837 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 HHIPL2Q6UWX4 724 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 OSBP2Q969R2 916 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 M0R2C6 588 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 BAG3O95817 575 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
NUP43-201ENST00000340413 PRPF40BQ6NWY9 871 aaKnown RBP8.54□□□□□ -1.04
NUP43-201ENST00000340413 KLHL34Q8N239 644 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 PTH1RQ03431 593 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 PPP4R3BQ5MIZ7 849 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 FAM177A1Q8N128 213 aaPredicted RBP8.54□□□□□ -1.04
NUP43-201ENST00000340413 RIOK1Q9BRS2 568 aaKnown RBP8.54□□□□□ -1.04
NUP43-201ENST00000340413 ARPP21Q9UBL0 812 aaPredicted RBP8.54□□□□□ -1.04
NUP43-201ENST00000340413 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 RPS6KB1P23443 525 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 PPP2R5BQ15173 497 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 NAA16Q6N069 864 aaPredicted RBP8.54□□□□□ -1.04
NUP43-201ENST00000340413 CLEC17AQ6ZS10 378 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 STAG1Q8WVM7 1258 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 AIDAQ96BJ3 306 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 CRNKL1Q9BZJ0 848 aaKnown RBP8.54□□□□□ -1.04
NUP43-201ENST00000340413 KRT23Q9C075 422 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 ANTXR1Q9H6X2 564 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 LRP2BPQ9P2M1 347 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 POLLQ9UGP5 575 aa8.54□□□□□ -1.04
NUP43-201ENST00000340413 GREB1LQ9C091 1923 aaPredicted RBP8.53□□□□□ -1.04
NUP43-201ENST00000340413 GPR75-ASB3A0A0A6YYF3 556 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 LDHBP07195 334 aaKnown RBP8.53□□□□□ -1.04
NUP43-201ENST00000340413 GYG1P46976 350 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
NUP43-201ENST00000340413 MTMR14Q8NCE2 650 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 HELBQ8NG08 1087 aaPredicted RBP8.53□□□□□ -1.04
NUP43-201ENST00000340413 LLPHQ9BRT6 129 aaKnown RBP8.53□□□□□ -1.04
NUP43-201ENST00000340413 NOL10Q9BSC4 688 aaKnown RBP8.53□□□□□ -1.04
NUP43-201ENST00000340413 ZC3H12CQ9C0D7 883 aaKnown RBP8.53□□□□□ -1.04
NUP43-201ENST00000340413 TMEM87BQ96K49 555 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 KCNA3P22001 575 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 EXOSC10Q01780 885 aaKnown RBP8.53□□□□□ -1.04
NUP43-201ENST00000340413 BLOC1S2Q6QNY1 142 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 SMIM5Q71RC9 77 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 DEFB132Q7Z7B7 95 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 IL25Q9H293 177 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 PIM2Q9P1W9 311 aa8.53□□□□□ -1.04
NUP43-201ENST00000340413 ORC4O43929 436 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 SLC3A2P08195 630 aaKnown RBP8.52□□□□□ -1.05
NUP43-201ENST00000340413 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
NUP43-201ENST00000340413 MAGEB6Q8N7X4 407 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 NEK1Q96PY6 1258 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 WWC3Q9ULE0 1092 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 LIMCH1Q9UPQ0 1083 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 TMTC2Q8N394 836 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 ZNF287Q9HBT7 754 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 PLIN4Q96Q06 1357 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 FOXP2O15409 715 aa8.52□□□□□ -1.05
NUP43-201ENST00000340413 ZNF274Q96GC6 653 aaPredicted RBP8.52□□□□□ -1.05
NUP43-201ENST00000340413 IDH1O75874 414 aaKnown RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 CYP7A1P22680 504 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 RPS12P25398 132 aaKnown RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 FKBP1CQ5VVH2 108 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 NCOA7Q8NI08 942 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 MAP3K14Q99558 947 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 PUS7LQ9H0K6 701 aaKnown RBP8.51□□□□□ -1.05
NUP43-201ENST00000340413 CHMP5Q9NZZ3 219 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 SERPINA10Q9UK55 444 aa8.51□□□□□ -1.05
NUP43-201ENST00000340413 SYNPO2Q9UMS6 1093 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms