RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 MCAMP43121 646 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 CRKP46108 304 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 HTRA3P83110 453 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 PI16Q6UXB8 463 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 DLK2Q6UY11 383 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 CLASRPQ8N2M8 674 aaKnown RBP18.72■□□□□ 0.59
UBE3B-201ENST00000340074 SPATA5Q8NB90 893 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 DCTPP1Q9H773 170 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 HMG20BQ9P0W2 317 aa18.72■□□□□ 0.59
UBE3B-201ENST00000340074 SCAF8Q9UPN6 1271 aaKnown RBP18.72■□□□□ 0.59
UBE3B-201ENST00000340074 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
UBE3B-201ENST00000340074 ADM5C9JUS6 153 aa18.71■□□□□ 0.59
UBE3B-201ENST00000340074 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
UBE3B-201ENST00000340074 SULF1Q8IWU6 871 aa18.71■□□□□ 0.59
UBE3B-201ENST00000340074 PRMT6Q96LA8 375 aaPredicted RBP18.71■□□□□ 0.59
UBE3B-201ENST00000340074 PITPNM2Q9BZ72 1349 aa18.71■□□□□ 0.59
UBE3B-201ENST00000340074 MAST3O60307 1309 aa18.7■□□□□ 0.58
UBE3B-201ENST00000340074 AOX1Q06278 1338 aa18.7■□□□□ 0.58
UBE3B-201ENST00000340074 LDHBP07195 334 aaKnown RBP18.7■□□□□ 0.58
UBE3B-201ENST00000340074 IRX6P78412 446 aaPredicted RBP18.7■□□□□ 0.58
UBE3B-201ENST00000340074 HDLBPQ00341 1268 aaKnown RBP18.7■□□□□ 0.58
UBE3B-201ENST00000340074 AAMPQ13685 434 aa18.7■□□□□ 0.58
UBE3B-201ENST00000340074 ZGPATQ8N5A5 531 aaKnown RBP18.7■□□□□ 0.58
UBE3B-201ENST00000340074 LRRCC1Q9C099 1032 aa18.7■□□□□ 0.58
UBE3B-201ENST00000340074 ABCF2Q9UG63 623 aa18.7■□□□□ 0.58
UBE3B-201ENST00000340074 TEKT1Q969V4 418 aa18.69■□□□□ 0.58
UBE3B-201ENST00000340074 ZNF512BQ96KM6 892 aaPredicted RBP18.69■□□□□ 0.58
UBE3B-201ENST00000340074 MYO1BO43795 1136 aa18.68■□□□□ 0.58
UBE3B-201ENST00000340074 SMARCA5O60264 1052 aaPredicted RBP18.68■□□□□ 0.58
UBE3B-201ENST00000340074 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
UBE3B-201ENST00000340074 MRIQ9BWK5 157 aa18.68■□□□□ 0.58
UBE3B-201ENST00000340074 SNRKQ9NRH2 765 aa18.68■□□□□ 0.58
UBE3B-201ENST00000340074 DOCK2Q92608 1830 aa18.68■□□□□ 0.58
UBE3B-201ENST00000340074 MAST2Q6P0Q8 1798 aa18.68■□□□□ 0.58
UBE3B-201ENST00000340074 CLRN2A0PK11 232 aa18.67■□□□□ 0.58
UBE3B-201ENST00000340074 TMEM88BA6NKF7 163 aa18.67■□□□□ 0.58
UBE3B-201ENST00000340074 CST9Q5W186 159 aa18.67■□□□□ 0.58
UBE3B-201ENST00000340074 TBC1D9Q6ZT07 1266 aa18.67■□□□□ 0.58
UBE3B-201ENST00000340074 CREBZFQ9NS37 354 aa18.67■□□□□ 0.58
UBE3B-201ENST00000340074 PCNTO95613 3336 aa18.66■□□□□ 0.58
UBE3B-201ENST00000340074 CELF2O95319 508 aaKnown RBP18.66■□□□□ 0.58
UBE3B-201ENST00000340074 DIXDC1Q155Q3 683 aa18.66■□□□□ 0.58
UBE3B-201ENST00000340074 SPTY2D1Q68D10 685 aaPredicted RBP18.66■□□□□ 0.58
UBE3B-201ENST00000340074 HHIPL2Q6UWX4 724 aa18.66■□□□□ 0.58
UBE3B-201ENST00000340074 ERICH6Q7L0X2 663 aa18.66■□□□□ 0.58
UBE3B-201ENST00000340074 APOBEC3FQ8IUX4 373 aaKnown RBP18.66■□□□□ 0.58
UBE3B-201ENST00000340074 ZDHHC15Q96MV8 337 aa18.66■□□□□ 0.58
UBE3B-201ENST00000340074 TDRD3Q9H7E2 651 aaKnown RBP18.66■□□□□ 0.58
UBE3B-201ENST00000340074 ZNF408Q9H9D4 720 aa18.66■□□□□ 0.58
UBE3B-201ENST00000340074 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
UBE3B-201ENST00000340074 SPDYE2Q495Y8 402 aa18.66■□□□□ 0.58
UBE3B-201ENST00000340074 DZIP1Q86YF9 867 aaKnown RBP18.66■□□□□ 0.58
UBE3B-201ENST00000340074 VEZTQ9HBM0 779 aa18.66■□□□□ 0.58
UBE3B-201ENST00000340074 AK9Q5TCS8 1911 aa18.65■□□□□ 0.58
UBE3B-201ENST00000340074 CYP2E1P05181 493 aaPredicted RBP18.65■□□□□ 0.58
UBE3B-201ENST00000340074 ZAP70P43403 619 aa18.65■□□□□ 0.58
UBE3B-201ENST00000340074 PRAMEF18Q5VWM3 479 aa18.65■□□□□ 0.58
UBE3B-201ENST00000340074 APOBEC3HQ6NTF7 200 aaKnown RBP18.65■□□□□ 0.58
UBE3B-201ENST00000340074 CDCA5Q96FF9 252 aa18.65■□□□□ 0.58
UBE3B-201ENST00000340074 ZNF70Q9UC06 446 aaPredicted RBP18.65■□□□□ 0.58
UBE3B-201ENST00000340074 DAGLAQ9Y4D2 1042 aa18.65■□□□□ 0.58
UBE3B-201ENST00000340074 MECOMQ03112 1051 aa18.64■□□□□ 0.57
UBE3B-201ENST00000340074 LRP2BPQ9P2M1 347 aa18.64■□□□□ 0.57
UBE3B-201ENST00000340074 NDUFB9Q9Y6M9 179 aa18.64■□□□□ 0.57
UBE3B-201ENST00000340074 MYH7P12883 1935 aa18.63■□□□□ 0.57
UBE3B-201ENST00000340074 ZNF384Q8TF68 577 aa18.63■□□□□ 0.57
UBE3B-201ENST00000340074 DEFB129Q9H1M3 183 aa18.63■□□□□ 0.57
UBE3B-201ENST00000340074 RAI14Q9P0K7 980 aa18.63■□□□□ 0.57
UBE3B-201ENST00000340074 DNAJC5GQ8N7S2 189 aa18.62■□□□□ 0.57
UBE3B-201ENST00000340074 NSUN4Q96CB9 384 aaKnown RBP18.62■□□□□ 0.57
UBE3B-201ENST00000340074 ABT1Q9ULW3 272 aaKnown RBP18.62■□□□□ 0.57
UBE3B-201ENST00000340074 CDK5RAP2Q96SN8 1893 aa18.62■□□□□ 0.57
UBE3B-201ENST00000340074 GAKO14976 1311 aa18.61■□□□□ 0.57
UBE3B-201ENST00000340074 CACNB3P54284 484 aa18.61■□□□□ 0.57
UBE3B-201ENST00000340074 SLF2Q8IX21 1173 aa18.61■□□□□ 0.57
UBE3B-201ENST00000340074 GCC1Q96CN9 775 aa18.61■□□□□ 0.57
UBE3B-201ENST00000340074 PIH1D3Q9NQM4 214 aaKnown RBP18.61■□□□□ 0.57
UBE3B-201ENST00000340074 TCP10L2B9ZVM9 353 aa18.6■□□□□ 0.57
UBE3B-201ENST00000340074 RASA3Q14644 834 aa18.6■□□□□ 0.57
UBE3B-201ENST00000340074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.6■□□□□ 0.57
UBE3B-201ENST00000340074 RWDD1Q9H446 243 aaPredicted RBP18.6■□□□□ 0.57
UBE3B-201ENST00000340074 ANTXR1Q9H6X2 564 aa18.6■□□□□ 0.57
UBE3B-201ENST00000340074 PAPPA2Q9BXP8 1791 aa18.6■□□□□ 0.57
UBE3B-201ENST00000340074 MROH7-TTC4A0A0A0MT08 1334 aa18.6■□□□□ 0.57
UBE3B-201ENST00000340074 IGHDP01880 384 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 ATP5JP18859 108 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 GSTO1P78417 241 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 TNFAIP1Q13829 316 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 ANKRD45Q5TZF3 282 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 CDC42EP5Q6NZY7 148 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 FAM163AQ96GL9 167 aaPredicted RBP18.59■□□□□ 0.57
UBE3B-201ENST00000340074 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
UBE3B-201ENST00000340074 GBA2Q9HCG7 927 aaPredicted RBP18.59■□□□□ 0.57
UBE3B-201ENST00000340074 TMOD2Q9NZR1 351 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 MKRN1Q9UHC7 482 aaKnown RBP18.59■□□□□ 0.57
UBE3B-201ENST00000340074 PPP2R3BQ9Y5P8 575 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 TLL2Q9Y6L7 1015 aa18.59■□□□□ 0.57
UBE3B-201ENST00000340074 SAPCD2Q86UD0 394 aa18.58■□□□□ 0.57
UBE3B-201ENST00000340074 C2orf69Q8N8R5 385 aa18.58■□□□□ 0.57
UBE3B-201ENST00000340074 BOLA2Q9H3K6 86 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms