RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 WNK4Q96J92 1243 aa24.29■■□□□ 1.48
ITGA4-202ENST00000339307 SIL1Q9H173 461 aa24.29■■□□□ 1.48
ITGA4-202ENST00000339307 USP2O75604 605 aaPredicted RBP24.28■■□□□ 1.48
ITGA4-202ENST00000339307 SLC5A1P13866 664 aa24.28■■□□□ 1.48
ITGA4-202ENST00000339307 TEKT1Q969V4 418 aa24.28■■□□□ 1.48
ITGA4-202ENST00000339307 ZBTB48P10074 688 aaPredicted RBP24.27■■□□□ 1.48
ITGA4-202ENST00000339307 SOX10P56693 466 aa24.27■■□□□ 1.48
ITGA4-202ENST00000339307 INHBEP58166 350 aa24.27■■□□□ 1.48
ITGA4-202ENST00000339307 ANKRD13AQ8IZ07 590 aa24.27■■□□□ 1.48
ITGA4-202ENST00000339307 TRMT2AQ8IZ69 625 aaKnown RBP24.27■■□□□ 1.48
ITGA4-202ENST00000339307 API5Q9BZZ5 524 aaKnown RBP24.27■■□□□ 1.48
ITGA4-202ENST00000339307 TMEM39BQ9GZU3 492 aa24.27■■□□□ 1.48
ITGA4-202ENST00000339307 ALDH1A1P00352 501 aa24.27■■□□□ 1.48
ITGA4-202ENST00000339307 CT47B1P0C2W7 299 aaPredicted RBP24.27■■□□□ 1.48
ITGA4-202ENST00000339307 RFX5P48382 616 aaPredicted RBP24.27■■□□□ 1.48
ITGA4-202ENST00000339307 RGS19P49795 217 aa24.27■■□□□ 1.48
ITGA4-202ENST00000339307 CCER2I3L3R5 266 aa24.26■■□□□ 1.47
ITGA4-202ENST00000339307 FKTNO75072 461 aa24.26■■□□□ 1.47
ITGA4-202ENST00000339307 CACNB3P54284 484 aa24.26■■□□□ 1.47
ITGA4-202ENST00000339307 IFNL1Q8IU54 200 aa24.26■■□□□ 1.47
ITGA4-202ENST00000339307 LPIN2Q92539 896 aa24.26■■□□□ 1.47
ITGA4-202ENST00000339307 R3HDMLQ9H3Y0 253 aa24.26■■□□□ 1.47
ITGA4-202ENST00000339307 ELP3Q9H9T3 547 aa24.26■■□□□ 1.47
ITGA4-202ENST00000339307 TMOD2Q9NZR1 351 aa24.26■■□□□ 1.47
ITGA4-202ENST00000339307 FGFR2P21802 821 aa24.25■■□□□ 1.47
ITGA4-202ENST00000339307 CDAN1Q8IWY9 1227 aa24.25■■□□□ 1.47
ITGA4-202ENST00000339307 HDAC5Q9UQL6 1122 aa24.25■■□□□ 1.47
ITGA4-202ENST00000339307 ARAP2Q8WZ64 1704 aa24.24■■□□□ 1.47
ITGA4-202ENST00000339307 UNCXA6NJT0 531 aa24.24■■□□□ 1.47
ITGA4-202ENST00000339307 HDLBPQ00341 1268 aaKnown RBP24.24■■□□□ 1.47
ITGA4-202ENST00000339307 PKN2Q16513 984 aaKnown RBP24.24■■□□□ 1.47
ITGA4-202ENST00000339307 CEP126Q9P2H0 1117 aa24.24■■□□□ 1.47
ITGA4-202ENST00000339307 LRRFIP2Q9Y608 721 aaKnown RBP24.24■■□□□ 1.47
ITGA4-202ENST00000339307 OTUD7BQ6GQQ9 843 aa24.23■■□□□ 1.47
ITGA4-202ENST00000339307 HPS5Q9UPZ3 1129 aa24.23■■□□□ 1.47
ITGA4-202ENST00000339307 MAST3O60307 1309 aa24.23■■□□□ 1.47
ITGA4-202ENST00000339307 ATG9AQ7Z3C6 839 aa24.22■■□□□ 1.47
ITGA4-202ENST00000339307 OPTNQ96CV9 577 aa24.22■■□□□ 1.47
ITGA4-202ENST00000339307 TEPSINQ96N21 525 aa24.22■■□□□ 1.47
ITGA4-202ENST00000339307 KIF16BQ96L93 1317 aa24.22■■□□□ 1.47
ITGA4-202ENST00000339307 IGF2BP3O00425 579 aaKnown RBP eCLIP24.21■■□□□ 1.47
ITGA4-202ENST00000339307 ATP2B3Q16720 1220 aa24.21■■□□□ 1.47
ITGA4-202ENST00000339307 WDR66Q8TBY9 1149 aa24.21■■□□□ 1.47
ITGA4-202ENST00000339307 CSADQ9Y600 493 aa24.21■■□□□ 1.47
ITGA4-202ENST00000339307 GJA5P36382 358 aa24.2■■□□□ 1.46
ITGA4-202ENST00000339307 RARSP54136 660 aaKnown RBP24.2■■□□□ 1.46
ITGA4-202ENST00000339307 NOM1Q5C9Z4 860 aaKnown RBP24.2■■□□□ 1.46
ITGA4-202ENST00000339307 ZDHHC15Q96MV8 337 aa24.2■■□□□ 1.46
ITGA4-202ENST00000339307 GNL3LQ9NVN8 582 aaKnown RBP24.2■■□□□ 1.46
ITGA4-202ENST00000339307 PA2G4Q9UQ80 394 aaKnown RBP24.2■■□□□ 1.46
ITGA4-202ENST00000339307 MAP3K9P80192 1104 aa24.19■■□□□ 1.46
ITGA4-202ENST00000339307 MEIS3Q99687 375 aa24.19■■□□□ 1.46
ITGA4-202ENST00000339307 CFHR5Q9BXR6 569 aa24.19■■□□□ 1.46
ITGA4-202ENST00000339307 SUGT1Q9Y2Z0 365 aa24.19■■□□□ 1.46
ITGA4-202ENST00000339307 CIAO1O76071 339 aa24.18■■□□□ 1.46
ITGA4-202ENST00000339307 MRIQ9BWK5 157 aa24.18■■□□□ 1.46
ITGA4-202ENST00000339307 FBXO3Q9UK99 471 aa24.18■■□□□ 1.46
ITGA4-202ENST00000339307 IL15P40933 162 aaPredicted RBP24.18■■□□□ 1.46
ITGA4-202ENST00000339307 VGLL4Q14135 290 aa24.18■■□□□ 1.46
ITGA4-202ENST00000339307 APOBEC3HQ6NTF7 200 aaKnown RBP24.18■■□□□ 1.46
ITGA4-202ENST00000339307 HHIPL2Q6UWX4 724 aa24.18■■□□□ 1.46
ITGA4-202ENST00000339307 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.18■■□□□ 1.46
ITGA4-202ENST00000339307 CNKSR2Q8WXI2 1034 aa24.18■■□□□ 1.46
ITGA4-202ENST00000339307 FBXO46Q6PJ61 603 aaPredicted RBP24.17■■□□□ 1.46
ITGA4-202ENST00000339307 FRAT1Q92837 279 aaPredicted RBP24.17■■□□□ 1.46
ITGA4-202ENST00000339307 OTUD5Q96G74 571 aa24.17■■□□□ 1.46
ITGA4-202ENST00000339307 TRIM17Q9Y577 477 aa24.17■■□□□ 1.46
ITGA4-202ENST00000339307 CRHR2Q13324 411 aa24.16■■□□□ 1.46
ITGA4-202ENST00000339307 MYH13Q9UKX3 1938 aa24.16■■□□□ 1.46
ITGA4-202ENST00000339307 OTOFQ9HC10 1997 aa24.15■■□□□ 1.46
ITGA4-202ENST00000339307 DIXDC1Q155Q3 683 aa24.15■■□□□ 1.46
ITGA4-202ENST00000339307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.15■■□□□ 1.46
ITGA4-202ENST00000339307 HOOK2Q96ED9 719 aa24.15■■□□□ 1.46
ITGA4-202ENST00000339307 WRNIP1Q96S55 665 aa24.15■■□□□ 1.46
ITGA4-202ENST00000339307 PTPN18Q99952 460 aa24.15■■□□□ 1.46
ITGA4-202ENST00000339307 LDHBP07195 334 aaKnown RBP24.14■■□□□ 1.45
ITGA4-202ENST00000339307 GNAI3P08754 354 aa24.14■■□□□ 1.45
ITGA4-202ENST00000339307 TCP10Q12799 353 aa24.14■■□□□ 1.45
ITGA4-202ENST00000339307 FAM83AQ86UY5 434 aa24.14■■□□□ 1.45
ITGA4-202ENST00000339307 ARHGAP45Q92619 1136 aa24.14■■□□□ 1.45
ITGA4-202ENST00000339307 CCL15-CCL14A0A0B4J2E2 113 aa24.13■■□□□ 1.45
ITGA4-202ENST00000339307 IPO8O15397 1037 aaKnown RBP24.13■■□□□ 1.45
ITGA4-202ENST00000339307 SRGAP3O43295 1099 aa24.13■■□□□ 1.45
ITGA4-202ENST00000339307 PRDX5P30044 214 aa24.13■■□□□ 1.45
ITGA4-202ENST00000339307 PHKA1P46020 1223 aa24.13■■□□□ 1.45
ITGA4-202ENST00000339307 GTF2A2P52657 109 aa24.13■■□□□ 1.45
ITGA4-202ENST00000339307 CCL15Q16663 113 aa24.13■■□□□ 1.45
ITGA4-202ENST00000339307 MIGA2Q7L4E1 593 aa24.13■■□□□ 1.45
ITGA4-202ENST00000339307 ZKSCAN4Q969J2 545 aaPredicted RBP24.13■■□□□ 1.45
ITGA4-202ENST00000339307 DENND2AQ9ULE3 1009 aa24.13■■□□□ 1.45
ITGA4-202ENST00000339307 ADORA1P30542 326 aa24.12■■□□□ 1.45
ITGA4-202ENST00000339307 DCAF15Q66K64 600 aa24.12■■□□□ 1.45
ITGA4-202ENST00000339307 INTS3Q68E01 1043 aaKnown RBP24.12■■□□□ 1.45
ITGA4-202ENST00000339307 ERO1AQ96HE7 468 aa24.12■■□□□ 1.45
ITGA4-202ENST00000339307 COPRSQ9NQ92 184 aa24.12■■□□□ 1.45
ITGA4-202ENST00000339307 DAGLAQ9Y4D2 1042 aa24.12■■□□□ 1.45
ITGA4-202ENST00000339307 TESPA1A2RU30 521 aaPredicted RBP24.11■■□□□ 1.45
ITGA4-202ENST00000339307 TIMM10P62072 90 aa24.11■■□□□ 1.45
ITGA4-202ENST00000339307 FKBP1CQ5VVH2 108 aa24.11■■□□□ 1.45
ITGA4-202ENST00000339307 CD99L2Q8TCZ2 262 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms