RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 COL4A5P29400 1685 aa17.48■□□□□ 0.39
NIPAL3-202ENST00000339255 PRDX5P30044 214 aa17.47■□□□□ 0.39
NIPAL3-202ENST00000339255 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
NIPAL3-202ENST00000339255 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
NIPAL3-202ENST00000339255 SLF2Q8IX21 1173 aa17.47■□□□□ 0.39
NIPAL3-202ENST00000339255 NSUN4Q96CB9 384 aaKnown RBP17.47■□□□□ 0.39
NIPAL3-202ENST00000339255 ANO2Q9NQ90 1003 aa17.47■□□□□ 0.39
NIPAL3-202ENST00000339255 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
NIPAL3-202ENST00000339255 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.39
NIPAL3-202ENST00000339255 MECOMQ03112 1051 aa17.46■□□□□ 0.39
NIPAL3-202ENST00000339255 JAG2Q9Y219 1238 aa17.46■□□□□ 0.39
NIPAL3-202ENST00000339255 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 FBXW7Q969H0 707 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 OSBP2Q969R2 916 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 IL25Q9H293 177 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 YDJCA8MPS7 323 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 LDHCP07864 332 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 CYP7A1P22680 504 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
NIPAL3-202ENST00000339255 ARHGAP27Q6ZUM4 889 aa17.44■□□□□ 0.38
NIPAL3-202ENST00000339255 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
NIPAL3-202ENST00000339255 AIDAQ96BJ3 306 aa17.44■□□□□ 0.38
NIPAL3-202ENST00000339255 USP26Q9BXU7 913 aa17.44■□□□□ 0.38
NIPAL3-202ENST00000339255 GPAA1O43292 621 aa17.43■□□□□ 0.38
NIPAL3-202ENST00000339255 CHGBP05060 677 aa17.43■□□□□ 0.38
NIPAL3-202ENST00000339255 LMNB1P20700 586 aa17.43■□□□□ 0.38
NIPAL3-202ENST00000339255 RASSF7Q02833 373 aa17.43■□□□□ 0.38
NIPAL3-202ENST00000339255 SEC62Q99442 399 aaKnown RBP17.43■□□□□ 0.38
NIPAL3-202ENST00000339255 LSG1Q9H089 658 aaKnown RBP17.43■□□□□ 0.38
NIPAL3-202ENST00000339255 PUS7LQ9H0K6 701 aaKnown RBP17.43■□□□□ 0.38
NIPAL3-202ENST00000339255 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 M0R2C6 588 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 GNAT2P19087 354 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 MCCP23508 829 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 ZNF384Q8TF68 577 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 TBC1D32Q96NH3 1257 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 NOL10Q9BSC4 688 aaKnown RBP17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 C22orf23Q9BZE7 217 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 MROH7-TTC4A0A0A0MT08 1334 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 MAGEB6P1A0A0J9YX57 407 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 YBX3P16989 372 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■■■□□ 19.2
NIPAL3-202ENST00000339255 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 TNIP1Q15025 636 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 SLFNL1Q499Z3 407 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 DSCC1Q9BVC3 393 aa17.42■□□□□ 0.38
NIPAL3-202ENST00000339255 MBD4O95243 580 aa17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 VIL1P09327 827 aaKnown RBP17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 RBM25P49756 843 aaKnown RBP17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 MRIQ9BWK5 157 aa17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 KCNQ5Q9NR82 932 aa17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 TTF2Q9UNY4 1162 aaKnown RBP17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 CDK5RAP2Q96SN8 1893 aa17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 LAMA4Q16363 1823 aa17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 FOCADQ5VW36 1801 aa17.41■□□□□ 0.38
NIPAL3-202ENST00000339255 GAKO14976 1311 aa17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 BAG3O95817 575 aa17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 MMP14P50281 582 aa17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 RSBN1LQ6PCB5 846 aaPredicted RBP17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 CCDC129Q6ZRS4 1044 aa17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 MAP4K1Q92918 833 aa17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 STRBPQ96SI9 672 aaKnown RBP17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 ECM29Q5VYK3 1845 aa17.4■□□□□ 0.38
NIPAL3-202ENST00000339255 FZD9O00144 591 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 PSMD14O00487 310 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 RAD17O75943 681 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 HSPD1P10809 573 aaKnown RBP17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 PLCG2P16885 1265 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 DIXDC1Q155Q3 683 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 GRIK5Q16478 980 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 HHIPL2Q6UWX4 724 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 AGBL3Q8NEM8 1001 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 TEKT1Q969V4 418 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 RIOK1Q9BRS2 568 aaKnown RBP17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 ZMYM6O95789 1325 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 RPS12P25398 132 aaKnown RBP17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 PPP4CP60510 307 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 CXCL9Q07325 125 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 GPR162Q16538 588 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 RNF20Q5VTR2 975 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 MIGA1Q8NAN2 632 aa17.39■□□□□ 0.37
NIPAL3-202ENST00000339255 GPR75-ASB3A0A0A6YYF3 556 aa17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 ANAPC15P60006 121 aa17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 PTH1RQ03431 593 aa17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 CRNKL1Q9BZJ0 848 aaKnown RBP17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 NACAP1Q9BZK3 213 aa17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 ARMT1Q9H993 441 aa17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 CTNNA3Q9UI47 895 aa17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 SERPINA10Q9UK55 444 aa17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 ADAMTSL1Q8N6G6 1762 aa17.38■□□□□ 0.37
NIPAL3-202ENST00000339255 HSPA4P34932 840 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms