RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 EFCC1Q9HA90 598 aa17.87■□□□□ 0.45
COMMD4-202ENST00000338995 TMOD2Q9NZR1 351 aa17.87■□□□□ 0.45
COMMD4-202ENST00000338995 ZNF646O15015 1829 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-202ENST00000338995 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-202ENST00000338995 TCP10L2B9ZVM9 353 aa17.86■□□□□ 0.45
COMMD4-202ENST00000338995 NBPF7P0C2Y1 421 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-202ENST00000338995 GTF2A2P52657 109 aa17.86■□□□□ 0.45
COMMD4-202ENST00000338995 MRIQ9BWK5 157 aa17.86■□□□□ 0.45
COMMD4-202ENST00000338995 ELP3Q9H9T3 547 aa17.86■□□□□ 0.45
COMMD4-202ENST00000338995 UTYO14607 1347 aa17.85■□□□□ 0.45
COMMD4-202ENST00000338995 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-202ENST00000338995 CRHR2Q13324 411 aa17.85■□□□□ 0.45
COMMD4-202ENST00000338995 TEKT1Q969V4 418 aa17.85■□□□□ 0.45
COMMD4-202ENST00000338995 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
COMMD4-202ENST00000338995 ZFYVE28Q9HCC9 887 aa17.85■□□□□ 0.45
COMMD4-202ENST00000338995 PTPN22Q9Y2R2 807 aa17.85■□□□□ 0.45
COMMD4-202ENST00000338995 PDE8BO95263 885 aa17.84■□□□□ 0.45
COMMD4-202ENST00000338995 IFIT1P09914 478 aaKnown RBP17.84■□□□□ 0.45
COMMD4-202ENST00000338995 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
COMMD4-202ENST00000338995 SUGT1Q9Y2Z0 365 aa17.84■□□□□ 0.45
COMMD4-202ENST00000338995 MAST3O60307 1309 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 PTPRCP08575 1304 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 GJA5P36382 358 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 RABL6Q3YEC7 729 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-202ENST00000338995 NBPF11Q86T75 865 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 CD99L2Q8TCZ2 262 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 KAZALD1Q96I82 304 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 TMEM106CQ9BVX2 250 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 TMEM39BQ9GZU3 492 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 SSC5DA1L4H1 1573 aa17.83■□□□□ 0.44
COMMD4-202ENST00000338995 ECM29Q5VYK3 1845 aa17.82■□□□□ 0.44
COMMD4-202ENST00000338995 AOX1Q06278 1338 aa17.82■□□□□ 0.44
COMMD4-202ENST00000338995 CCL15-CCL14A0A0B4J2E2 113 aa17.82■□□□□ 0.44
COMMD4-202ENST00000338995 TAF1CQ15572 869 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-202ENST00000338995 CCL15Q16663 113 aa17.82■□□□□ 0.44
COMMD4-202ENST00000338995 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-202ENST00000338995 TEPSINQ96N21 525 aa17.82■□□□□ 0.44
COMMD4-202ENST00000338995 PTPN18Q99952 460 aa17.82■□□□□ 0.44
COMMD4-202ENST00000338995 IQSEC3Q9UPP2 1182 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-202ENST00000338995 KIF22Q14807 665 aa17.81■□□□□ 0.44
COMMD4-202ENST00000338995 LRRC24Q50LG9 513 aa17.81■□□□□ 0.44
COMMD4-202ENST00000338995 FKBP1CQ5VVH2 108 aa17.81■□□□□ 0.44
COMMD4-202ENST00000338995 DCAF15Q66K64 600 aa17.81■□□□□ 0.44
COMMD4-202ENST00000338995 FAM83AQ86UY5 434 aa17.81■□□□□ 0.44
COMMD4-202ENST00000338995 MRPL50Q8N5N7 158 aaKnown RBP17.81■□□□□ 0.44
COMMD4-202ENST00000338995 MS4A4AQ96JQ5 239 aa17.81■□□□□ 0.44
COMMD4-202ENST00000338995 CETPP11597 493 aa17.8■□□□□ 0.44
COMMD4-202ENST00000338995 BCAMP50895 628 aa17.8■□□□□ 0.44
COMMD4-202ENST00000338995 VGLL4Q14135 290 aa17.8■□□□□ 0.44
COMMD4-202ENST00000338995 PUM3Q15397 648 aaKnown RBP17.8■□□□□ 0.44
COMMD4-202ENST00000338995 HHIPL2Q6UWX4 724 aa17.8■□□□□ 0.44
COMMD4-202ENST00000338995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.8■□□□□ 0.44
COMMD4-202ENST00000338995 ZDHHC15Q96MV8 337 aa17.8■□□□□ 0.44
COMMD4-202ENST00000338995 HDAC5Q9UQL6 1122 aa17.8■□□□□ 0.44
COMMD4-202ENST00000338995 TNRC18O15417 2968 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-202ENST00000338995 E9PSI1 815 aa17.79■□□□□ 0.44
COMMD4-202ENST00000338995 ERO1BQ86YB8 467 aa17.79■□□□□ 0.44
COMMD4-202ENST00000338995 WDR66Q8TBY9 1149 aa17.79■□□□□ 0.44
COMMD4-202ENST00000338995 BRI3BPQ8WY22 251 aa17.79■□□□□ 0.44
COMMD4-202ENST00000338995 ARMC5Q96C12 935 aa17.79■□□□□ 0.44
COMMD4-202ENST00000338995 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
COMMD4-202ENST00000338995 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
COMMD4-202ENST00000338995 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
COMMD4-202ENST00000338995 SLC5A1P13866 664 aa17.78■□□□□ 0.44
COMMD4-202ENST00000338995 SNAPC2Q13487 334 aa17.78■□□□□ 0.44
COMMD4-202ENST00000338995 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
COMMD4-202ENST00000338995 GNL3LQ9NVN8 582 aaKnown RBP17.78■□□□□ 0.44
COMMD4-202ENST00000338995 SPDYE5A6NIY4 337 aa17.77■□□□□ 0.44
COMMD4-202ENST00000338995 VGLL2Q8N8G2 317 aa17.77■□□□□ 0.44
COMMD4-202ENST00000338995 LPIN2Q92539 896 aa17.77■□□□□ 0.44
COMMD4-202ENST00000338995 WRNIP1Q96S55 665 aa17.77■□□□□ 0.44
COMMD4-202ENST00000338995 USP44Q9H0E7 712 aa17.77■□□□□ 0.44
COMMD4-202ENST00000338995 POTEFA5A3E0 1075 aa17.76■□□□□ 0.43
COMMD4-202ENST00000338995 EYA2O00167 538 aa17.76■□□□□ 0.43
COMMD4-202ENST00000338995 CACNB3P54284 484 aa17.76■□□□□ 0.43
COMMD4-202ENST00000338995 GRIK5Q16478 980 aa17.76■□□□□ 0.43
COMMD4-202ENST00000338995 SLC9C1Q4G0N8 1177 aa17.76■□□□□ 0.43
COMMD4-202ENST00000338995 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
COMMD4-202ENST00000338995 ZNF341Q9BYN7 854 aa17.76■□□□□ 0.43
COMMD4-202ENST00000338995 GNRH1P01148 92 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 SLC4A8Q2Y0W8 1093 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 APOBEC3HQ6NTF7 200 aaKnown RBP17.75■□□□□ 0.43
COMMD4-202ENST00000338995 CDAN1Q8IWY9 1227 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 KLHDC4Q8TBB5 520 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 SSH1Q8WYL5 1049 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 A0A1B0GUL6 1792 aa17.75■□□□□ 0.43
COMMD4-202ENST00000338995 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
COMMD4-202ENST00000338995 TLR2O60603 784 aa17.74■□□□□ 0.43
COMMD4-202ENST00000338995 FGFR2P21802 821 aa17.74■□□□□ 0.43
COMMD4-202ENST00000338995 PRMT2P55345 433 aa17.74■□□□□ 0.43
COMMD4-202ENST00000338995 PPATQ06203 517 aa17.74■□□□□ 0.43
COMMD4-202ENST00000338995 PPIL2Q13356 520 aa17.74■□□□□ 0.43
COMMD4-202ENST00000338995 ZKSCAN4Q969J2 545 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-202ENST00000338995 CEP126Q9P2H0 1117 aa17.74■□□□□ 0.43
COMMD4-202ENST00000338995 HOXD10P28358 340 aa17.73■□□□□ 0.43
COMMD4-202ENST00000338995 FAM151AQ8WW52 585 aa17.73■□□□□ 0.43
COMMD4-202ENST00000338995 SNCAIPQ9Y6H5 919 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms