RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 LDHCP07864 332 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 RBM5P52756 815 aaKnown RBP eCLIP14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 GSTO1P78417 241 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 DLGAP5Q15398 846 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 TBC1D10BQ4KMP7 808 aaPredicted RBP14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 EAPPQ56P03 285 aaPredicted RBP14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 PI16Q6UXB8 463 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 TBC1D9Q6ZT07 1266 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 SAMD7Q7Z3H4 446 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 OTUD7AQ8TE49 926 aaPredicted RBP14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 DNAJC2Q99543 621 aaKnown RBP14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 HAUS7Q99871 368 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 MYOZ2Q9NPC6 264 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 RAI14Q9P0K7 980 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 CLEC11AQ9Y240 323 aa14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 PDE1AP54750 535 aa14.48□□□□□ -0.09
SPTLC1-202ENST00000337841 MAP3K12Q12852 859 aa14.48□□□□□ -0.09
SPTLC1-202ENST00000337841 DZIP1Q86YF9 867 aaKnown RBP14.48□□□□□ -0.09
SPTLC1-202ENST00000337841 TEKT1Q969V4 418 aa14.48□□□□□ -0.09
SPTLC1-202ENST00000337841 SERPINA10Q9UK55 444 aa14.48□□□□□ -0.09
SPTLC1-202ENST00000337841 A0A1B0GUL6 1792 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 SHTN1A0MZ66 631 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 GOLIM4O00461 696 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 PRDX5P30044 214 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 CRKP46108 304 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 GRIK5Q16478 980 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 KIF4BQ2VIQ3 1234 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 CFAP100Q494V2 611 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 HHIPL2Q6UWX4 724 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 MTMR14Q8NCE2 650 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 ZC3H15Q8WU90 426 aaKnown RBP14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
SPTLC1-202ENST00000337841 MYO1BO43795 1136 aa14.46□□□□□ -0.09
SPTLC1-202ENST00000337841 IDH1O75874 414 aaKnown RBP14.46□□□□□ -0.09
SPTLC1-202ENST00000337841 TMED8Q6PL24 325 aaPredicted RBP14.46□□□□□ -0.09
SPTLC1-202ENST00000337841 PLEKHM2Q8IWE5 1019 aa14.46□□□□□ -0.09
SPTLC1-202ENST00000337841 PIH1D3Q9NQM4 214 aaKnown RBP14.46□□□□□ -0.09
SPTLC1-202ENST00000337841 NDUFB9Q9Y6M9 179 aa14.46□□□□□ -0.09
SPTLC1-202ENST00000337841 AOX1Q06278 1338 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 SALL3Q9BXA9 1300 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 KIF3CO14782 793 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 HIRAP54198 1017 aaPredicted RBP14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 MECOMQ03112 1051 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 LRRFIP1Q32MZ4 808 aaKnown RBP14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 TSHZ3Q63HK5 1081 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 NAA16Q6N069 864 aaPredicted RBP14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 LDHDQ86WU2 507 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 TIAM2Q8IVF5 1701 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 PI4K2BQ8TCG2 481 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 TRPM4Q8TD43 1214 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 FAM163AQ96GL9 167 aaPredicted RBP14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 OSBPL3Q9H4L5 887 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 ANTXR1Q9H6X2 564 aa14.45□□□□□ -0.1
SPTLC1-202ENST00000337841 COL1A1P02452 1464 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 WNT10BO00744 389 aa14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 TOMM70O94826 608 aa14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 ZSCAN25Q6NSZ9 544 aa14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 DCPSQ96C86 337 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 NSUN4Q96CB9 384 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 PRMT6Q96LA8 375 aaPredicted RBP14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 ZDHHC15Q96MV8 337 aa14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 NOL10Q9BSC4 688 aaKnown RBP14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 PGAP2Q9UHJ9 254 aa14.44□□□□□ -0.1
SPTLC1-202ENST00000337841 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 BAG3O95817 575 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 CYP7A1P22680 504 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 PDE4AP27815 886 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 DIXDC1Q155Q3 683 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 NBPF9Q3BBW0 867 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 SLC9C2Q5TAH2 1124 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 EDC3Q96F86 508 aaKnown RBP14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 ZBED3Q96IU2 234 aaPredicted RBP14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 SCN9AQ15858 1988 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 WDR90Q96KV7 1748 aa14.43□□□□□ -0.1
SPTLC1-202ENST00000337841 TRIM6-TRIM34B2RNG4 842 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 MAP4K4O95819 1239 aaPredicted RBP14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 EGFRP00533 1210 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 SMC1BQ8NDV3 1235 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 RBM46Q8TBY0 533 aaKnown RBP14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 EVI5LQ96CN4 794 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 TMOD2Q9NZR1 351 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 DAGLAQ9Y4D2 1042 aa14.42□□□□□ -0.1
SPTLC1-202ENST00000337841 ARAP2Q8WZ64 1704 aa14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 GPR75-ASB3A0A0A6YYF3 556 aa14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 ANGEL2Q5VTE6 544 aaKnown RBP14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 APOBEC3HQ6NTF7 200 aaKnown RBP14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 CDC37L1Q7L3B6 337 aa14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 CNTROBQ8N137 903 aa14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 TDRD3Q9H7E2 651 aaKnown RBP14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 USP40Q9NVE5 1235 aa14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 ZNF70Q9UC06 446 aaPredicted RBP14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 GAKO14976 1311 aa14.41□□□□□ -0.1
SPTLC1-202ENST00000337841 UTRNP46939 3433 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms