RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 PPP2R5BQ15173 497 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 RNF20Q5VTR2 975 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 TSHZ3Q63HK5 1081 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 NAA16Q6N069 864 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 ZNF594Q96JF6 807 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 RBM42Q9BTD8 480 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 CCDC8Q9H0W5 538 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 LTBP3Q9NS15 1303 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 SKOR2Q2VWA4 1001 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 ZNF784Q8NCA9 323 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 CTNNA3Q9UI47 895 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 NIP7Q9Y221 180 aaKnown RBP eCLIP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 OTOFQ9HC10 1997 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 XDHP47989 1333 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 LOXHD1Q8IVV2 1947 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 PATL2C9JE40 543 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 IFIT1P09914 478 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 PDE6AP16499 860 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 ADD1P35611 737 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 TNPO1Q92973 898 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 LMBRD1Q9NUN5 540 aa6.42□□□□□ -1.38
PRPF4B-201ENST00000337659 CTDNEP1O95476 244 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 HDLBPQ00341 1268 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 SEC23AQ15436 765 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 KLHL40Q2TBA0 621 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 DIAPH3Q9NSV4 1193 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 GSG1L2A8MUP6 293 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 SMARCA1P28370 1054 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 ZAP70P43403 619 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 TXNRD1Q16881 649 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 DHX32Q7L7V1 743 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 IGDCC4Q8TDY8 1250 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.41□□□□□ -1.382e-7■■□□□ 11.9
PRPF4B-201ENST00000337659 IGKV6D-41A0A0C4DH26 115 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 E7EWF7 191 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 ATP2B4P23634 1241 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 PHKA1P46020 1223 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 TRAPPC3LQ5T215 181 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 TPTE2Q6XPS3 522 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 CNKSR2Q8WXI2 1034 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 NSUN4Q96CB9 384 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 TPCN1Q9ULQ1 816 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 TAF6LQ9Y6J9 622 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 FUT2Q10981 343 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 NTRK3Q16288 839 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 LDHAL6AQ6ZMR3 332 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 TMEM87BQ96K49 555 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 ATP6V0A2Q9Y487 856 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 CD2APQ9Y5K6 639 aa6.41□□□□□ -1.38
PRPF4B-201ENST00000337659 SIP14410 1827 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 SH2B2O14492 632 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 APBA3O96018 575 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 SRGNP10124 158 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 MAP3K10Q02779 954 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 COL9A3Q14050 684 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 FUCA2Q9BTY2 467 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 PUS7LQ9H0K6 701 aaKnown RBP6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 TBC1D2BQ9UPU7 963 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 TIMM10P62072 90 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 ME3Q16798 604 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 TMEM132AQ24JP5 1023 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 TPRNQ4KMQ1 711 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 NBPF11Q86T75 865 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 ANKRD18AQ8IVF6 992 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 JMYQ8N9B5 988 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 MTMR14Q8NCE2 650 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 ZBED3Q96IU2 234 aaPredicted RBP6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 SEC31BQ9NQW1 1179 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 MTMR6Q9Y217 621 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 CYP46A1Q9Y6A2 500 aa6.4□□□□□ -1.38
PRPF4B-201ENST00000337659 LARGE1O95461 756 aa6.4□□□□□ -1.39
PRPF4B-201ENST00000337659 ACSBG1Q96GR2 724 aa6.4□□□□□ -1.39
PRPF4B-201ENST00000337659 BOLA2Q9H3K6 86 aa6.4□□□□□ -1.39
PRPF4B-201ENST00000337659 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.4□□□□□ -1.39
PRPF4B-201ENST00000337659 NEDD4P46934 1319 aa6.4□□□□□ -1.39
PRPF4B-201ENST00000337659 BAG4O95429 457 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 IGHMBP2P38935 993 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 RPS8P62241 208 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 RESTQ13127 1097 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 ZGPATQ8N5A5 531 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 CELF1Q92879 486 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 FAM217BQ9NTX9 383 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 METTL24Q5JXM2 366 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 CWC27Q6UX04 472 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 NLGN1Q8N2Q7 840 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 NEK1Q96PY6 1258 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 SETDB2Q96T68 719 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 FSD1Q9BTV5 496 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 CNNM2Q9H8M5 875 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 KAT6BQ8WYB5 2073 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 ZNF236Q9UL36 1845 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 WDR33Q9C0J8 1336 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 GPR75-ASB3A0A0A6YYF3 556 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 TTC39AQ5SRH9 613 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 NSUN7Q8NE18 718 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 SYT17Q9BSW7 474 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 ATP8A2Q9NTI2 1148 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 TRIM37O94972 964 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 NPR1P16066 1061 aa6.39□□□□□ -1.39
PRPF4B-201ENST00000337659 EHD4Q9H223 541 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms