RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 COL1A1P02452 1464 aaPredicted RBP18.71■□□□□ 0.59
SEC13-201ENST00000337354 PLEKHM2Q8IWE5 1019 aa18.7■□□□□ 0.58
SEC13-201ENST00000337354 SLF2Q8IX21 1173 aa18.7■□□□□ 0.58
SEC13-201ENST00000337354 PI4K2BQ8TCG2 481 aa18.7■□□□□ 0.58
SEC13-201ENST00000337354 SERPINA10Q9UK55 444 aa18.7■□□□□ 0.58
SEC13-201ENST00000337354 AOX1Q06278 1338 aa18.7■□□□□ 0.58
SEC13-201ENST00000337354 ARAP2Q8WZ64 1704 aa18.7■□□□□ 0.58
SEC13-201ENST00000337354 F8W031 263 aaPredicted RBP18.69■□□□□ 0.58
SEC13-201ENST00000337354 PRDX5P30044 214 aa18.69■□□□□ 0.58
SEC13-201ENST00000337354 EAPPQ56P03 285 aaPredicted RBP18.69■□□□□ 0.58
SEC13-201ENST00000337354 TBC1D9Q6ZT07 1266 aa18.69■□□□□ 0.58
SEC13-201ENST00000337354 MTMR14Q8NCE2 650 aa18.69■□□□□ 0.58
SEC13-201ENST00000337354 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
SEC13-201ENST00000337354 MYOZ2Q9NPC6 264 aa18.69■□□□□ 0.58
SEC13-201ENST00000337354 GRIK5Q16478 980 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 HHIPL2Q6UWX4 724 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 SMC1BQ8NDV3 1235 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 PAG1Q9NWQ8 432 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 ADAMTSL1Q8N6G6 1762 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 GOLIM4O00461 696 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 GSTO1P78417 241 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 MAP3K12Q12852 859 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 DZIP1Q86YF9 867 aaKnown RBP18.68■□□□□ 0.58
SEC13-201ENST00000337354 ZC3H15Q8WU90 426 aaKnown RBP18.68■□□□□ 0.58
SEC13-201ENST00000337354 TEKT1Q969V4 418 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 FAM163AQ96GL9 167 aaPredicted RBP18.68■□□□□ 0.58
SEC13-201ENST00000337354 RAI14Q9P0K7 980 aa18.68■□□□□ 0.58
SEC13-201ENST00000337354 LDHCP07864 332 aa18.67■□□□□ 0.58
SEC13-201ENST00000337354 PDE4AP27815 886 aa18.67■□□□□ 0.58
SEC13-201ENST00000337354 DLGAP5Q15398 846 aa18.67■□□□□ 0.58
SEC13-201ENST00000337354 KIF4BQ2VIQ3 1234 aa18.67■□□□□ 0.58
SEC13-201ENST00000337354 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
SEC13-201ENST00000337354 SAMD7Q7Z3H4 446 aa18.67■□□□□ 0.58
SEC13-201ENST00000337354 ANTXR1Q9H6X2 564 aa18.67■□□□□ 0.58
SEC13-201ENST00000337354 PIH1D3Q9NQM4 214 aaKnown RBP18.67■□□□□ 0.58
SEC13-201ENST00000337354 ZNF646O15015 1829 aaPredicted RBP18.66■□□□□ 0.58
SEC13-201ENST00000337354 SHTN1A0MZ66 631 aa18.66■□□□□ 0.58
SEC13-201ENST00000337354 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
SEC13-201ENST00000337354 CRKP46108 304 aa18.66■□□□□ 0.58
SEC13-201ENST00000337354 RBM5P52756 815 aaKnown RBP eCLIP18.66■□□□□ 0.58
SEC13-201ENST00000337354 MECOMQ03112 1051 aa18.66■□□□□ 0.58
SEC13-201ENST00000337354 FSTL1Q12841 308 aa18.66■□□□□ 0.58
SEC13-201ENST00000337354 CFAP100Q494V2 611 aa18.66■□□□□ 0.58
SEC13-201ENST00000337354 TBC1D10BQ4KMP7 808 aaPredicted RBP18.66■□□□□ 0.58
SEC13-201ENST00000337354 RBM26Q5T8P6 1007 aaKnown RBP18.66■□□□□ 0.58
SEC13-201ENST00000337354 NSUN4Q96CB9 384 aaKnown RBP18.66■□□□□ 0.58
SEC13-201ENST00000337354 ZDHHC15Q96MV8 337 aa18.66■□□□□ 0.58
SEC13-201ENST00000337354 NDUFB9Q9Y6M9 179 aa18.66■□□□□ 0.58
SEC13-201ENST00000337354 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
SEC13-201ENST00000337354 POTEJP0CG39 1038 aa18.65■□□□□ 0.58
SEC13-201ENST00000337354 LRRFIP1Q32MZ4 808 aaKnown RBP18.65■□□□□ 0.58
SEC13-201ENST00000337354 TICAM2Q86XR7 235 aa18.65■□□□□ 0.58
SEC13-201ENST00000337354 ZBED3Q96IU2 234 aaPredicted RBP18.65■□□□□ 0.58
SEC13-201ENST00000337354 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.65■□□□□ 0.584e-8■□□□□ 10.1
SEC13-201ENST00000337354 CLEC11AQ9Y240 323 aa18.65■□□□□ 0.58
SEC13-201ENST00000337354 SPDYE2BA6NHP3 402 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 WNT10BO00744 389 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 MYO1BO43795 1136 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 SPDYE6P0CI01 402 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 HSPA6P17066 643 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 HIRAP54198 1017 aaPredicted RBP18.64■□□□□ 0.57
SEC13-201ENST00000337354 ZSCAN25Q6NSZ9 544 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 LDHDQ86WU2 507 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 KBTBD3Q8NAB2 608 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 TRPM4Q8TD43 1214 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 EVI5LQ96CN4 794 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 PGAP2Q9UHJ9 254 aa18.64■□□□□ 0.57
SEC13-201ENST00000337354 EGFRP00533 1210 aa18.63■□□□□ 0.57
SEC13-201ENST00000337354 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
SEC13-201ENST00000337354 EDC3Q96F86 508 aaKnown RBP18.63■□□□□ 0.57
SEC13-201ENST00000337354 PRMT6Q96LA8 375 aaPredicted RBP18.63■□□□□ 0.57
SEC13-201ENST00000337354 GAKO14976 1311 aa18.62■□□□□ 0.57
SEC13-201ENST00000337354 MYH13Q9UKX3 1938 aa18.62■□□□□ 0.57
SEC13-201ENST00000337354 DIXDC1Q155Q3 683 aa18.62■□□□□ 0.57
SEC13-201ENST00000337354 SLC9C2Q5TAH2 1124 aa18.62■□□□□ 0.57
SEC13-201ENST00000337354 APOBEC3HQ6NTF7 200 aaKnown RBP18.62■□□□□ 0.57
SEC13-201ENST00000337354 CHADLQ6NUI6 762 aa18.62■□□□□ 0.57
SEC13-201ENST00000337354 GPR75-ASB3A0A0A6YYF3 556 aa18.61■□□□□ 0.57
SEC13-201ENST00000337354 BAG3O95817 575 aa18.61■□□□□ 0.57
SEC13-201ENST00000337354 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
SEC13-201ENST00000337354 ZFYP08048 801 aaPredicted RBP18.61■□□□□ 0.57
SEC13-201ENST00000337354 NBPF9Q3BBW0 867 aa18.61■□□□□ 0.57
SEC13-201ENST00000337354 CERS3Q8IU89 383 aa18.61■□□□□ 0.57
SEC13-201ENST00000337354 CNTROBQ8N137 903 aa18.61■□□□□ 0.57
SEC13-201ENST00000337354 ZNF384Q8TF68 577 aa18.61■□□□□ 0.57
SEC13-201ENST00000337354 DAGLAQ9Y4D2 1042 aa18.61■□□□□ 0.57
SEC13-201ENST00000337354 MROH7-TTC4A0A0A0MT08 1334 aa18.6■□□□□ 0.57
SEC13-201ENST00000337354 UBE3CQ15386 1083 aa18.6■□□□□ 0.57
SEC13-201ENST00000337354 MAGEB6Q8N7X4 407 aa18.6■□□□□ 0.57
SEC13-201ENST00000337354 DCPSQ96C86 337 aaKnown RBP18.6■□□□□ 0.57
SEC13-201ENST00000337354 TRIM6-TRIM34B2RNG4 842 aa18.59■□□□□ 0.57
SEC13-201ENST00000337354 PDE6AP16499 860 aa18.59■□□□□ 0.57
SEC13-201ENST00000337354 CYP7A1P22680 504 aa18.59■□□□□ 0.57
SEC13-201ENST00000337354 ADD2P35612 726 aa18.59■□□□□ 0.57
SEC13-201ENST00000337354 PPP4CP60510 307 aa18.59■□□□□ 0.57
SEC13-201ENST00000337354 TTC22Q5TAA0 569 aa18.59■□□□□ 0.57
SEC13-201ENST00000337354 NOL10Q9BSC4 688 aaKnown RBP18.59■□□□□ 0.57
SEC13-201ENST00000337354 PITPNM2Q9BZ72 1349 aa18.59■□□□□ 0.57
SEC13-201ENST00000337354 FSD1Q9BTV5 496 aa18.58■□□□□ 0.57
SEC13-201ENST00000337354 PCDHAC2Q9Y5I4 1007 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms