RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
SEC23B-202ENST00000336714 CEP89Q96ST8 783 aa12.66□□□□□ -0.38
SEC23B-202ENST00000336714 ATP2C2O75185 946 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 ILDR1Q86SU0 546 aaPredicted RBP12.65□□□□□ -0.38
SEC23B-202ENST00000336714 CRACR2AQ9BSW2 395 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 INTS13Q9NVM9 706 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 ABCC3O15438 1527 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 CCDC175P0C221 793 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 GGCXP38435 758 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 STX17P56962 302 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■□□□□ 8.4
SEC23B-202ENST00000336714 NAIF1Q69YI7 327 aaPredicted RBP12.65□□□□□ -0.38
SEC23B-202ENST00000336714 TMEM139Q8IV31 216 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
SEC23B-202ENST00000336714 HSD3B7Q9H2F3 369 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 CDC23Q9UJX2 597 aa12.65□□□□□ -0.38
SEC23B-202ENST00000336714 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.39
SEC23B-202ENST00000336714 CTDNEP1O95476 244 aa12.65□□□□□ -0.39
SEC23B-202ENST00000336714 ATP1A2P50993 1020 aa12.65□□□□□ -0.39
SEC23B-202ENST00000336714 TMED8Q6PL24 325 aaPredicted RBP12.65□□□□□ -0.39
SEC23B-202ENST00000336714 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 SRGAP2O75044 1071 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 SYKP43405 635 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 GSCP56915 257 aaPredicted RBP12.64□□□□□ -0.39
SEC23B-202ENST00000336714 GNGT1P63211 74 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 PDE4BQ07343 736 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 MAP9Q49MG5 647 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 TC2NQ8N9U0 490 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
SEC23B-202ENST00000336714 CTAGE9A4FU28 777 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 CDC27P30260 824 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 SATB1Q01826 763 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 E2F5Q15329 346 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
SEC23B-202ENST00000336714 ADALQ6DHV7 355 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 FAM43BQ6ZT52 329 aaPredicted RBP12.64□□□□□ -0.39
SEC23B-202ENST00000336714 HDAC6Q9UBN7 1215 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
SEC23B-202ENST00000336714 CAMSAP1Q5T5Y3 1602 aa12.64□□□□□ -0.39
SEC23B-202ENST00000336714 CYP21A2P08686 494 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
SEC23B-202ENST00000336714 DDX46Q7L014 1031 aaKnown RBP12.63□□□□□ -0.39
SEC23B-202ENST00000336714 CEP112Q8N8E3 955 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 MROH2AA6NES4 1674 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 GOLGA6CA6NDK9 693 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 RPSAP08865 295 aaKnown RBP12.63□□□□□ -0.39
SEC23B-202ENST00000336714 GOLGA6DP0CG33 693 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 USP8P40818 1118 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 RAD9BQ6WBX8 426 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 FAM76AQ8TAV0 307 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 RNF217Q8TC41 542 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 GOLGA6AQ9NYA3 693 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 NFE2L3Q9Y4A8 694 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 ADGRB1O14514 1584 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 NF2P35240 595 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 KCTD16Q68DU8 428 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 GRAMD1CQ8IYS0 662 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 LINC00301Q8NCQ3 95 aa12.63□□□□□ -0.39
SEC23B-202ENST00000336714 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
SEC23B-202ENST00000336714 NRXN1Q9ULB1 1477 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
SEC23B-202ENST00000336714 SYF2O95926 243 aaKnown RBP12.62□□□□□ -0.39
SEC23B-202ENST00000336714 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
SEC23B-202ENST00000336714 STIM1Q13586 685 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 OTUD6BQ8N6M0 293 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 TRIM10Q9UDY6 481 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 GUCA1BQ9UMX6 200 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 MROH7-TTC4A0A0A0MT08 1334 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 NDUFAB1O14561 156 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 TEX33O43247 280 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 PEX19P40855 299 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 MATR3P43243 847 aaKnown RBP eCLIP12.62□□□□□ -0.394e-6■■■■□ 20.3
SEC23B-202ENST00000336714 KCNJ6P48051 423 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 HAND2P61296 217 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■■■□ 22
SEC23B-202ENST00000336714 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
SEC23B-202ENST00000336714 C8orf76Q96K31 380 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 SCLT1Q96NL6 688 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
SEC23B-202ENST00000336714 CCDC196A0A1B0GTZ2 297 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 TAF5LO75529 589 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 PDCLQ13371 301 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 GPIHBP1Q8IV16 184 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 AIFM3Q96NN9 605 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.62□□□□□ -0.39
SEC23B-202ENST00000336714 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
SEC23B-202ENST00000336714 GLI2P10070 1586 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 GOLGA6L9A6NEM1 432 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 RXRAP19793 462 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 IRAK1P51617 712 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 POLA2Q14181 598 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 HSP90AB4PQ58FF6 505 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 SPECC1LQ69YQ0 1117 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 STOX1Q6ZVD7 989 aa12.61□□□□□ -0.39
SEC23B-202ENST00000336714 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms