RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 RASA3Q14644 834 aa22.12■■□□□ 1.13
CMTM1-204ENST00000336328 SPDYE2Q495Y8 402 aa22.12■■□□□ 1.13
CMTM1-204ENST00000336328 MCOLN1Q9GZU1 580 aa22.12■■□□□ 1.13
CMTM1-204ENST00000336328 IQSEC3Q9UPP2 1182 aaPredicted RBP22.12■■□□□ 1.13
CMTM1-204ENST00000336328 PCDHAC2Q9Y5I4 1007 aa22.12■■□□□ 1.13
CMTM1-204ENST00000336328 CCDC85CA6NKD9 419 aa22.11■■□□□ 1.13
CMTM1-204ENST00000336328 TEKT1Q969V4 418 aa22.11■■□□□ 1.13
CMTM1-204ENST00000336328 TDRD3Q9H7E2 651 aaKnown RBP22.11■■□□□ 1.13
CMTM1-204ENST00000336328 GNL3LQ9NVN8 582 aaKnown RBP22.11■■□□□ 1.13
CMTM1-204ENST00000336328 ALDH1A1P00352 501 aa22.1■■□□□ 1.13
CMTM1-204ENST00000336328 NBPF12Q5TAG4 269 aaPredicted RBP22.1■■□□□ 1.13
CMTM1-204ENST00000336328 SPRYD7Q5W111 196 aa22.1■■□□□ 1.13
CMTM1-204ENST00000336328 INTS3Q68E01 1043 aaKnown RBP22.1■■□□□ 1.13
CMTM1-204ENST00000336328 WDR66Q8TBY9 1149 aa22.1■■□□□ 1.13
CMTM1-204ENST00000336328 IL15P40933 162 aaPredicted RBP22.09■■□□□ 1.13
CMTM1-204ENST00000336328 TMOD2Q9NZR1 351 aa22.09■■□□□ 1.13
CMTM1-204ENST00000336328 LRRFIP2Q9Y608 721 aaKnown RBP22.09■■□□□ 1.13
CMTM1-204ENST00000336328 MANSC4A6NHS7 340 aaPredicted RBP22.08■■□□□ 1.13
CMTM1-204ENST00000336328 ZBTB48P10074 688 aaPredicted RBP22.08■■□□□ 1.13
CMTM1-204ENST00000336328 ATG9AQ7Z3C6 839 aa22.08■■□□□ 1.13
CMTM1-204ENST00000336328 ANKRD13AQ8IZ07 590 aa22.08■■□□□ 1.13
CMTM1-204ENST00000336328 USP2O75604 605 aaPredicted RBP22.07■■□□□ 1.12
CMTM1-204ENST00000336328 MKRN3Q13064 507 aaKnown RBP22.07■■□□□ 1.12
CMTM1-204ENST00000336328 NOM1Q5C9Z4 860 aaKnown RBP22.07■■□□□ 1.12
CMTM1-204ENST00000336328 HHIPL2Q6UWX4 724 aa22.07■■□□□ 1.12
CMTM1-204ENST00000336328 HOOK2Q96ED9 719 aa22.07■■□□□ 1.12
CMTM1-204ENST00000336328 SIL1Q9H173 461 aa22.07■■□□□ 1.12
CMTM1-204ENST00000336328 COPRSQ9NQ92 184 aa22.07■■□□□ 1.12
CMTM1-204ENST00000336328 ATP2B3Q16720 1220 aa22.06■■□□□ 1.12
CMTM1-204ENST00000336328 ZDHHC15Q96MV8 337 aa22.06■■□□□ 1.12
CMTM1-204ENST00000336328 TCP10L2B9ZVM9 353 aa22.05■■□□□ 1.12
CMTM1-204ENST00000336328 FKBP1CQ5VVH2 108 aa22.05■■□□□ 1.12
CMTM1-204ENST00000336328 OTUD7BQ6GQQ9 843 aa22.05■■□□□ 1.12
CMTM1-204ENST00000336328 CTU1Q7Z7A3 348 aaKnown RBP22.05■■□□□ 1.12
CMTM1-204ENST00000336328 MEIS3Q99687 375 aa22.05■■□□□ 1.12
CMTM1-204ENST00000336328 CFHR5Q9BXR6 569 aa22.05■■□□□ 1.12
CMTM1-204ENST00000336328 SEMA3EO15041 775 aa22.04■■□□□ 1.12
CMTM1-204ENST00000336328 TBC1D8O95759 1140 aa22.04■■□□□ 1.12
CMTM1-204ENST00000336328 PKN2Q16513 984 aaKnown RBP22.04■■□□□ 1.12
CMTM1-204ENST00000336328 ATF7IPQ6VMQ6 1270 aa22.04■■□□□ 1.12
CMTM1-204ENST00000336328 WNK4Q96J92 1243 aa22.04■■□□□ 1.12
CMTM1-204ENST00000336328 DIEXFQ68CQ4 756 aaKnown RBP22.03■■□□□ 1.12
CMTM1-204ENST00000336328 FAM83AQ86UY5 434 aa22.03■■□□□ 1.12
CMTM1-204ENST00000336328 FRAT1Q92837 279 aaPredicted RBP22.03■■□□□ 1.12
CMTM1-204ENST00000336328 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.03■■□□□ 1.12
CMTM1-204ENST00000336328 DENND2AQ9ULE3 1009 aa22.03■■□□□ 1.12
CMTM1-204ENST00000336328 FZD1Q9UP38 647 aa22.03■■□□□ 1.12
CMTM1-204ENST00000336328 AKAP2Q9Y2D5 859 aa22.03■■□□□ 1.12
CMTM1-204ENST00000336328 AOX1Q06278 1338 aa22.03■■□□□ 1.12
CMTM1-204ENST00000336328 ARAP2Q8WZ64 1704 aa22.03■■□□□ 1.12
CMTM1-204ENST00000336328 GPR25O00155 361 aa22.02■■□□□ 1.12
CMTM1-204ENST00000336328 ZBTB22O15209 634 aa22.02■■□□□ 1.12
CMTM1-204ENST00000336328 GRIK5Q16478 980 aa22.02■■□□□ 1.12
CMTM1-204ENST00000336328 CLMNQ96JQ2 1002 aa22.02■■□□□ 1.12
CMTM1-204ENST00000336328 TEPSINQ96N21 525 aa22.02■■□□□ 1.12
CMTM1-204ENST00000336328 SRGAP3O43295 1099 aa22.01■■□□□ 1.11
CMTM1-204ENST00000336328 MAP3K9P80192 1104 aa22.01■■□□□ 1.11
CMTM1-204ENST00000336328 MTX1Q13505 466 aa22.01■■□□□ 1.11
CMTM1-204ENST00000336328 ZGPATQ8N5A5 531 aaKnown RBP22.01■■□□□ 1.11
CMTM1-204ENST00000336328 GNAI2P04899 355 aa22■■□□□ 1.11
CMTM1-204ENST00000336328 LDHBP07195 334 aaKnown RBP22■■□□□ 1.11
CMTM1-204ENST00000336328 TRIM27P14373 513 aa22■■□□□ 1.11
CMTM1-204ENST00000336328 RGS19P49795 217 aa22■■□□□ 1.11
CMTM1-204ENST00000336328 HNRNPUQ00839 825 aaKnown RBP eCLIP22■■□□□ 1.11
CMTM1-204ENST00000336328 APOBEC3HQ6NTF7 200 aaKnown RBP22■■□□□ 1.11
CMTM1-204ENST00000336328 IFNL1Q8IU54 200 aa22■■□□□ 1.11
CMTM1-204ENST00000336328 ZNF296Q8WUU4 475 aaPredicted RBP22■■□□□ 1.11
CMTM1-204ENST00000336328 TMEM39BQ9GZU3 492 aa22■■□□□ 1.11
CMTM1-204ENST00000336328 PA2G4Q9UQ80 394 aaKnown RBP22■■□□□ 1.11
CMTM1-204ENST00000336328 CSADQ9Y600 493 aa22■■□□□ 1.11
CMTM1-204ENST00000336328 SSC5DA1L4H1 1573 aa21.99■■□□□ 1.11
CMTM1-204ENST00000336328 FKTNO75072 461 aa21.99■■□□□ 1.11
CMTM1-204ENST00000336328 BCAR3O75815 825 aa21.99■■□□□ 1.11
CMTM1-204ENST00000336328 MIER1Q8N108 512 aa21.99■■□□□ 1.11
CMTM1-204ENST00000336328 ZKSCAN2Q63HK3 967 aa21.98■■□□□ 1.11
CMTM1-204ENST00000336328 DCAF15Q66K64 600 aa21.98■■□□□ 1.11
CMTM1-204ENST00000336328 SALL1Q9NSC2 1324 aa21.98■■□□□ 1.11
CMTM1-204ENST00000336328 MYH13Q9UKX3 1938 aa21.98■■□□□ 1.11
CMTM1-204ENST00000336328 SLF2Q8IX21 1173 aa21.97■■□□□ 1.11
CMTM1-204ENST00000336328 MLLT1Q03111 559 aaPredicted RBP21.96■■□□□ 1.11
CMTM1-204ENST00000336328 G3BP1Q13283 466 aaKnown RBP eCLIP21.96■■□□□ 1.11
CMTM1-204ENST00000336328 MVPQ14764 893 aaKnown RBP21.96■■□□□ 1.11
CMTM1-204ENST00000336328 SPTY2D1Q68D10 685 aaPredicted RBP21.96■■□□□ 1.11
CMTM1-204ENST00000336328 CCDC102BQ68D86 513 aa21.96■■□□□ 1.11
CMTM1-204ENST00000336328 CLUAP1Q96AJ1 413 aa21.96■■□□□ 1.11
CMTM1-204ENST00000336328 OPTNQ96CV9 577 aa21.96■■□□□ 1.11
CMTM1-204ENST00000336328 ELP3Q9H9T3 547 aa21.96■■□□□ 1.11
CMTM1-204ENST00000336328 TESPA1A2RU30 521 aaPredicted RBP21.95■■□□□ 1.1
CMTM1-204ENST00000336328 PHKA1P46020 1223 aa21.95■■□□□ 1.1
CMTM1-204ENST00000336328 GTF2A2P52657 109 aa21.95■■□□□ 1.1
CMTM1-204ENST00000336328 CACNB3P54284 484 aa21.95■■□□□ 1.1
CMTM1-204ENST00000336328 TIMM10P62072 90 aa21.95■■□□□ 1.1
CMTM1-204ENST00000336328 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.95■■□□□ 1.1
CMTM1-204ENST00000336328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.95■■□□□ 1.1
CMTM1-204ENST00000336328 FAM151AQ8WW52 585 aa21.95■■□□□ 1.1
CMTM1-204ENST00000336328 A0A1B0GUL7 405 aa21.94■■□□□ 1.1
CMTM1-204ENST00000336328 WDHD1O75717 1129 aaPredicted RBP21.94■■□□□ 1.1
CMTM1-204ENST00000336328 PDS5AQ29RF7 1337 aaKnown RBP21.94■■□□□ 1.1
CMTM1-204ENST00000336328 PRDX5P30044 214 aa21.93■■□□□ 1.1
CMTM1-204ENST00000336328 TFCP2Q12800 502 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms