RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 NAP1L5Q96NT1 182 aaPredicted RBP27.44■■□□□ 1.98
ITM2C-203ENST00000335005 USP28Q96RU2 1077 aa27.44■■□□□ 1.98
ITM2C-203ENST00000335005 ECM29Q5VYK3 1845 aa27.44■■□□□ 1.98
ITM2C-203ENST00000335005 SCN7AQ01118 1682 aa27.44■■□□□ 1.98
ITM2C-203ENST00000335005 RGL2O15211 777 aa27.44■■□□□ 1.98
ITM2C-203ENST00000335005 MAP3K12Q12852 859 aa27.44■■□□□ 1.98
ITM2C-203ENST00000335005 CAMK4Q16566 473 aa27.44■■□□□ 1.98
ITM2C-203ENST00000335005 ANGEL1Q9UNK9 670 aaKnown RBP27.44■■□□□ 1.98
ITM2C-203ENST00000335005 NIP7Q9Y221 180 aaKnown RBP eCLIP27.44■■□□□ 1.98
ITM2C-203ENST00000335005 IGHMBP2P38935 993 aaKnown RBP27.43■■□□□ 1.98
ITM2C-203ENST00000335005 CLEC4GQ6UXB4 293 aa27.43■■□□□ 1.98
ITM2C-203ENST00000335005 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.43■■□□□ 1.98
ITM2C-203ENST00000335005 ZNF652Q9Y2D9 606 aa27.43■■□□□ 1.98
ITM2C-203ENST00000335005 SH2B2O14492 632 aaPredicted RBP27.42■■□□□ 1.98
ITM2C-203ENST00000335005 AIDAQ96BJ3 306 aa27.42■■□□□ 1.98
ITM2C-203ENST00000335005 PATL2C9JE40 543 aaKnown RBP27.42■■□□□ 1.98
ITM2C-203ENST00000335005 FOSBP53539 338 aa27.42■■□□□ 1.98
ITM2C-203ENST00000335005 FBXO18Q8NFZ0 1043 aa27.42■■□□□ 1.98
ITM2C-203ENST00000335005 TMEM87BQ96K49 555 aa27.42■■□□□ 1.98
ITM2C-203ENST00000335005 RTEL1Q9NZ71 1219 aa27.42■■□□□ 1.98
ITM2C-203ENST00000335005 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.42■■□□□ 1.98
ITM2C-203ENST00000335005 CTAGE5O15320 804 aa27.41■■□□□ 1.98
ITM2C-203ENST00000335005 CAVIN2O95810 425 aa27.41■■□□□ 1.98
ITM2C-203ENST00000335005 C8orf76Q96K31 380 aa27.41■■□□□ 1.98
ITM2C-203ENST00000335005 ANO8Q9HCE9 1232 aaPredicted RBP27.41■■□□□ 1.98
ITM2C-203ENST00000335005 ORC3Q9UBD5 711 aaPredicted RBP27.41■■□□□ 1.98
ITM2C-203ENST00000335005 CYB5R4Q7L1T6 521 aa27.4■■□□□ 1.98
ITM2C-203ENST00000335005 COL4A1P02462 1669 aa27.4■■□□□ 1.98
ITM2C-203ENST00000335005 PNPLA7Q6ZV29 1317 aa27.4■■□□□ 1.98
ITM2C-203ENST00000335005 BRAPQ7Z569 592 aa27.4■■□□□ 1.98
ITM2C-203ENST00000335005 CKAP2LQ8IYA6 745 aa27.4■■□□□ 1.98
ITM2C-203ENST00000335005 EPB41L4AQ9HCS5 686 aaPredicted RBP27.4■■□□□ 1.98
ITM2C-203ENST00000335005 AP5Z1O43299 807 aa27.39■■□□□ 1.98
ITM2C-203ENST00000335005 TERF1P54274 439 aa27.39■■□□□ 1.98
ITM2C-203ENST00000335005 MAGEB6Q8N7X4 407 aa27.39■■□□□ 1.98
ITM2C-203ENST00000335005 FTOQ9C0B1 505 aaKnown RBP eCLIP27.39■■□□□ 1.98
ITM2C-203ENST00000335005 CPLX1O14810 134 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 APPP05067 770 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 GUCY1B3Q02153 619 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 SGMS1Q86VZ5 419 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 CCAR1Q8IX12 1150 aaKnown RBP27.38■■□□□ 1.97
ITM2C-203ENST00000335005 A0A0G2JS52 829 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 FAM177BA6PVY3 158 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 ANO6Q4KMQ2 910 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 IFNL3Q8IZI9 196 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 ENGASEQ8NFI3 743 aa27.38■■□□□ 1.97
ITM2C-203ENST00000335005 NID2Q14112 1375 aa27.37■■□□□ 1.97
ITM2C-203ENST00000335005 NEDD4P46934 1319 aa27.37■■□□□ 1.97
ITM2C-203ENST00000335005 MBD4O95243 580 aa27.37■■□□□ 1.97
ITM2C-203ENST00000335005 GNAT2P19087 354 aa27.37■■□□□ 1.97
ITM2C-203ENST00000335005 CEBPZQ03701 1054 aaKnown RBP27.37■■□□□ 1.97
ITM2C-203ENST00000335005 CHRNDQ07001 517 aa27.37■■□□□ 1.97
ITM2C-203ENST00000335005 SASS6Q6UVJ0 657 aa27.37■■□□□ 1.97
ITM2C-203ENST00000335005 CDC5LQ99459 802 aaKnown RBP27.37■■□□□ 1.97
ITM2C-203ENST00000335005 POLR3EQ9NVU0 708 aa27.37■■□□□ 1.97
ITM2C-203ENST00000335005 DENND2AQ9ULE3 1009 aa27.37■■□□□ 1.97
ITM2C-203ENST00000335005 ZNF804BA4D1E1 1349 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 SNAP23O00161 211 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 CDKL5O76039 1030 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 YEATS4O95619 227 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 FAM160A1Q05DH4 1040 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 SNW1Q13573 536 aaKnown RBP27.36■■□□□ 1.97
ITM2C-203ENST00000335005 APOA5Q6Q788 366 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 TDRD7Q8NHU6 1098 aaKnown RBP27.36■■□□□ 1.97
ITM2C-203ENST00000335005 NKX2-3Q8TAU0 364 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 IGDCC4Q8TDY8 1250 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 GOLPH3LQ9H4A5 285 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 CBX8Q9HC52 389 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 COL24A1Q17RW2 1714 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 A0A1W2PQ27 194 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 A0A1W2PQ64 194 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 A0A1W2PQD8 194 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 CCDC73Q6ZRK6 1079 aa27.36■■□□□ 1.97
ITM2C-203ENST00000335005 B4E1Z4 1266 aa27.35■■□□□ 1.97
ITM2C-203ENST00000335005 LIFRP42702 1097 aa27.35■■□□□ 1.97
ITM2C-203ENST00000335005 KIAA2012Q0VF49 1180 aa27.35■■□□□ 1.97
ITM2C-203ENST00000335005 SF3B3Q15393 1217 aaKnown RBP27.35■■□□□ 1.97
ITM2C-203ENST00000335005 NAPBQ9H115 298 aa27.35■■□□□ 1.97
ITM2C-203ENST00000335005 CNNM2Q9H8M5 875 aa27.35■■□□□ 1.97
ITM2C-203ENST00000335005 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 GSG1L2A8MUP6 293 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 PPFIA3O75145 1194 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 TPM3P06753 285 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 METAP2P50579 478 aaKnown RBP eCLIP27.34■■□□□ 1.97
ITM2C-203ENST00000335005 BCAMP50895 628 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 LINC00301Q8NCQ3 95 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 LY9Q9HBG7 655 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 KCNQ2O43526 872 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 ADALQ6DHV7 355 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 MTA3Q9BTC8 594 aa27.34■■□□□ 1.97
ITM2C-203ENST00000335005 KIF23Q02241 960 aaPredicted RBP27.33■■□□□ 1.97
ITM2C-203ENST00000335005 MYSM1Q5VVJ2 828 aa27.33■■□□□ 1.97
ITM2C-203ENST00000335005 LINC00116Q8NCU8 138 aa27.33■■□□□ 1.97
ITM2C-203ENST00000335005 KCNG4Q8TDN1 519 aa27.33■■□□□ 1.97
ITM2C-203ENST00000335005 NUTM2BA6NNL0 878 aaPredicted RBP27.32■■□□□ 1.96
ITM2C-203ENST00000335005 NUTM2EB1AL46 878 aaPredicted RBP27.32■■□□□ 1.96
ITM2C-203ENST00000335005 TPM2P07951 284 aa27.32■■□□□ 1.96
ITM2C-203ENST00000335005 LUZP1Q86V48 1076 aa27.32■■□□□ 1.96
ITM2C-203ENST00000335005 NUTM2AQ8IVF1 878 aaPredicted RBP27.32■■□□□ 1.96
ITM2C-203ENST00000335005 ARMT1Q9H993 441 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms