RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 TCOF1Q13428 1488 aaKnown RBP7.16□□□□□ -1.26
PTBP3-202ENST00000334318 B4DLN1 442 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 ECE2O60344 883 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 RPS6KA4O75676 772 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 ATP2B4P23634 1241 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 MRPL12P52815 198 aaKnown RBP7.16□□□□□ -1.26
PTBP3-202ENST00000334318 PTPN14Q15678 1187 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 ZSCAN23Q3MJ62 389 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 SAMD7Q7Z3H4 446 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 TNS4Q8IZW8 715 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 FSIP1Q8NA03 581 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 UBXN4Q92575 508 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 CCDC66A2RUB6 948 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 ATP8B2P98198 1209 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 DEF6Q9H4E7 631 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 DCTPP1Q9H773 170 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 PRR36Q9H6K5 1346 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 FAM196BA6NMK8 535 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 BRF1Q92994 677 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 SNX21Q969T3 373 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 CLIP2Q9UDT6 1046 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 EFCAB6Q5THR3 1501 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 ADCY5O95622 1261 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 CFBP00751 764 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 KCTD2Q14681 263 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 SKIDA1Q1XH10 827 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 PIK3C2GO75747 1445 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 MYL3P08590 195 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 KLHL10Q6JEL2 608 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 BIN1O00499 593 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 BTDP43251 543 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 ZNF165P49910 485 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 UBXN2AP68543 259 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 CHRNDQ07001 517 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 KIF4BQ2VIQ3 1234 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 COL23A1Q86Y22 540 aaPredicted RBP7.16□□□□□ -1.26
PTBP3-202ENST00000334318 CCDC125Q86Z20 511 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 ZNF710Q8N1W2 664 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 NEK1Q96PY6 1258 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 WRNIP1Q96S55 665 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 SH2D4AQ9H788 454 aa7.16□□□□□ -1.26
PTBP3-202ENST00000334318 USP17L8P0C7I0 530 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 ARHGAP29Q52LW3 1261 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 IFIT1BQ5T764 474 aaKnown RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 ANO1Q5XXA6 986 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 METTL13Q8N6R0 699 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 COL17A1Q9UMD9 1497 aaPredicted RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 ATN1P54259 1190 aaPredicted RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 PABPC4Q13310 644 aaKnown RBP eCLIP7.15□□□□□ -1.261e-7■□□□□ 10.4
PTBP3-202ENST00000334318 FAM47AQ5JRC9 791 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 GIMAP6Q6P9H5 292 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 PRPF38AQ8NAV1 312 aaKnown RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 MAST3O60307 1309 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 TNPO2O14787 897 aaKnown RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 PLCG2P16885 1265 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 UBE2HP62256 183 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 NOM1Q5C9Z4 860 aaKnown RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 POLIQ9UNA4 740 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 SBNO1A3KN83 1393 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 ZSCAN22P10073 491 aaPredicted RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 NAPAP54920 295 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 GLG1Q92896 1179 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 PUS7Q96PZ0 661 aaKnown RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 MLXIPQ9HAP2 919 aa7.15□□□□□ -1.26
PTBP3-202ENST00000334318 ORC3Q9UBD5 711 aaPredicted RBP7.15□□□□□ -1.26
PTBP3-202ENST00000334318 NFIXQ14938 502 aa7.15□□□□□ -1.27
PTBP3-202ENST00000334318 SLC27A3Q5K4L6 730 aa7.15□□□□□ -1.27
PTBP3-202ENST00000334318 CEP85Q6P2H3 762 aa7.15□□□□□ -1.27
PTBP3-202ENST00000334318 APOL6Q9BWW8 343 aa7.15□□□□□ -1.27
PTBP3-202ENST00000334318 RNF41Q9H4P4 317 aaPredicted RBP7.15□□□□□ -1.27
PTBP3-202ENST00000334318 TRMT1Q9NXH9 659 aaKnown RBP7.15□□□□□ -1.27
PTBP3-202ENST00000334318 CNOT7Q9UIV1 285 aaKnown RBP7.15□□□□□ -1.27
PTBP3-202ENST00000334318 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.27
PTBP3-202ENST00000334318 EPB41L2O43491 1005 aaKnown RBP7.15□□□□□ -1.27
PTBP3-202ENST00000334318 ABL1P00519 1130 aa7.15□□□□□ -1.27
PTBP3-202ENST00000334318 ARPP19P56211 112 aa7.15□□□□□ -1.27
PTBP3-202ENST00000334318 LRSAM1Q6UWE0 723 aa7.15□□□□□ -1.27
PTBP3-202ENST00000334318 UPF1Q92900 1129 aaKnown RBP eCLIP7.15□□□□□ -1.27
PTBP3-202ENST00000334318 C16orf45Q96MC5 204 aaPredicted RBP7.15□□□□□ -1.27
PTBP3-202ENST00000334318 TDRD3Q9H7E2 651 aaKnown RBP7.15□□□□□ -1.27
PTBP3-202ENST00000334318 SPATA31A1Q5TZJ5 1347 aa7.15□□□□□ -1.27
PTBP3-202ENST00000334318 ERLIN1O75477 346 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 IL15P40933 162 aaPredicted RBP7.14□□□□□ -1.27
PTBP3-202ENST00000334318 EIF5P55010 431 aaKnown RBP7.14□□□□□ -1.27
PTBP3-202ENST00000334318 CWC15Q9P013 229 aaKnown RBP7.14□□□□□ -1.27
PTBP3-202ENST00000334318 LRFN2Q9ULH4 789 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 CTAGE5O15320 804 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 TRIM21P19474 475 aaKnown RBP7.14□□□□□ -1.27
PTBP3-202ENST00000334318 CYP2B6P20813 491 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 NCBP1Q09161 790 aaKnown RBP7.14□□□□□ -1.27
PTBP3-202ENST00000334318 AP5M1Q9H0R1 490 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 CNPY2Q9Y2B0 182 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 TNNT1P13805 278 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 IDEP14735 1019 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 SNAP25P60880 206 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 IFRD2Q12894 506 aaPredicted RBP7.14□□□□□ -1.27
PTBP3-202ENST00000334318 MXD3Q9BW11 206 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 SLC26A6Q9BXS9 759 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 GREM2Q9H772 168 aa7.14□□□□□ -1.27
PTBP3-202ENST00000334318 GGA3Q9NZ52 723 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms