RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 MCMDC2Q4G0Z9 681 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 DNAJC14Q6Y2X3 702 aaPredicted RBP12.47□□□□□ -0.41
AP1S3-201ENST00000334271 GET4Q7L5D6 327 aaPredicted RBP12.47□□□□□ -0.41
AP1S3-201ENST00000334271 CXorf38Q8TB03 319 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 SLC16A10Q8TF71 515 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 KIF2CQ99661 725 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 LSG1Q9H089 658 aaKnown RBP12.47□□□□□ -0.41
AP1S3-201ENST00000334271 STK32BQ9NY57 414 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 MAGEC2Q9UBF1 373 aaPredicted RBP12.47□□□□□ -0.41
AP1S3-201ENST00000334271 NUB1Q9Y5A7 615 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 SREK1Q8WXA9 508 aaKnown RBP12.47□□□□□ -0.41
AP1S3-201ENST00000334271 CCDC97Q96F63 343 aaPredicted RBP12.47□□□□□ -0.41
AP1S3-201ENST00000334271 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 MINPP1Q9UNW1 487 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
AP1S3-201ENST00000334271 CAVIN4Q5BKX8 364 aa12.46□□□□□ -0.41
AP1S3-201ENST00000334271 ZMYM1Q5SVZ6 1142 aa12.46□□□□□ -0.41
AP1S3-201ENST00000334271 WDR78Q5VTH9 848 aa12.46□□□□□ -0.41
AP1S3-201ENST00000334271 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
AP1S3-201ENST00000334271 DSCC1Q9BVC3 393 aa12.46□□□□□ -0.41
AP1S3-201ENST00000334271 KDM4CQ9H3R0 1056 aa12.46□□□□□ -0.41
AP1S3-201ENST00000334271 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
AP1S3-201ENST00000334271 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
AP1S3-201ENST00000334271 CCDC171Q6TFL3 1326 aa12.46□□□□□ -0.41
AP1S3-201ENST00000334271 RPAP1Q9BWH6 1393 aaPredicted RBP12.46□□□□□ -0.41
AP1S3-201ENST00000334271 FAM177BA6PVY3 158 aa12.46□□□□□ -0.42
AP1S3-201ENST00000334271 SCP2P22307 547 aa12.46□□□□□ -0.42
AP1S3-201ENST00000334271 PDE6BP35913 854 aa12.46□□□□□ -0.42
AP1S3-201ENST00000334271 APLP1P51693 650 aa12.46□□□□□ -0.42
AP1S3-201ENST00000334271 KRT32Q14532 448 aa12.46□□□□□ -0.42
AP1S3-201ENST00000334271 UBE3CQ15386 1083 aa12.46□□□□□ -0.42
AP1S3-201ENST00000334271 CCDC102BQ68D86 513 aa12.46□□□□□ -0.42
AP1S3-201ENST00000334271 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.42
AP1S3-201ENST00000334271 ZKSCAN1P17029 563 aaPredicted RBP12.45□□□□□ -0.42
AP1S3-201ENST00000334271 SETDB1Q15047 1291 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 SLC15A2Q16348 729 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 ZNF827Q17R98 1081 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
AP1S3-201ENST00000334271 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
AP1S3-201ENST00000334271 VTI1AQ96AJ9 217 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
AP1S3-201ENST00000334271 KIAA1551Q9HCM1 1747 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 PSMA5P28066 241 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 NMIQ13287 307 aaPredicted RBP12.45□□□□□ -0.42
AP1S3-201ENST00000334271 CACTIN-AS1Q8N1I8 211 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 ALDH8A1Q9H2A2 487 aaPredicted RBP12.45□□□□□ -0.42
AP1S3-201ENST00000334271 DENND2AQ9ULE3 1009 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 PNPLA7Q6ZV29 1317 aa12.45□□□□□ -0.42
AP1S3-201ENST00000334271 ALDH1B1P30837 517 aa12.44□□□□□ -0.42
AP1S3-201ENST00000334271 APPBP2Q92624 585 aa12.44□□□□□ -0.42
AP1S3-201ENST00000334271 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
AP1S3-201ENST00000334271 LIG1P18858 919 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 ADORA1P30542 326 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 NECTIN1Q15223 517 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 MKL1Q969V6 931 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 TBC1D2Q9BYX2 928 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 SERPINA10Q9UK55 444 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 ZMYM6O95789 1325 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 XDHP47989 1333 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 ZMYND10O75800 440 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 NPR1P16066 1061 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 MAP3K12Q12852 859 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 FBXO33Q7Z6M2 555 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 ZGPATQ8N5A5 531 aaKnown RBP12.43□□□□□ -0.42
AP1S3-201ENST00000334271 SPATA5Q8NB90 893 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 CTNNA3Q9UI47 895 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
AP1S3-201ENST00000334271 MAST2Q6P0Q8 1798 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 ANKRD31Q8N7Z5 1873 aa12.43□□□□□ -0.42
AP1S3-201ENST00000334271 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
AP1S3-201ENST00000334271 MCAMP43121 646 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 NT5C2P49902 561 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 DDR1Q08345 913 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 MSL3Q8N5Y2 521 aaKnown RBP12.42□□□□□ -0.42
AP1S3-201ENST00000334271 ATL2Q8NHH9 583 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 PMM1Q92871 262 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
AP1S3-201ENST00000334271 MAF1Q9H063 256 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 SALL1Q9NSC2 1324 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 TAF5LO75529 589 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 CREBRFQ8IUR6 639 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
AP1S3-201ENST00000334271 METTL14Q9HCE5 456 aaKnown RBP12.42□□□□□ -0.42
AP1S3-201ENST00000334271 MYH13Q9UKX3 1938 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 GNAT2P19087 354 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 ADD2P35612 726 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 KCNJ4P48050 445 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 FKBP4Q02790 459 aaKnown RBP eCLIP12.41□□□□□ -0.42
AP1S3-201ENST00000334271 STYK1Q6J9G0 422 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 CHMP4CQ96CF2 233 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 LTBP1Q14766 1721 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 A0A0D9SFI3 127 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 ZAP70P43403 619 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 PHKA1P46020 1223 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms