RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 UTYO14607 1347 aa15.19■□□□□ 0.02
C12orf56-201ENST00000333722 DDX19AQ9NUU7 478 aaKnown RBP15.19■□□□□ 0.02
C12orf56-201ENST00000333722 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
C12orf56-201ENST00000333722 ANGEL1Q9UNK9 670 aaKnown RBP15.19■□□□□ 0.02
C12orf56-201ENST00000333722 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
C12orf56-201ENST00000333722 SETD1AO15047 1707 aaKnown RBP15.18■□□□□ 0.02
C12orf56-201ENST00000333722 HSP90AA2PQ14568 343 aaPredicted RBP15.18■□□□□ 0.02
C12orf56-201ENST00000333722 CIAO1O76071 339 aa15.18■□□□□ 0.02
C12orf56-201ENST00000333722 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.02
C12orf56-201ENST00000333722 ITPK1Q13572 414 aa15.18■□□□□ 0.02
C12orf56-201ENST00000333722 IQCA1Q86XH1 822 aa15.18■□□□□ 0.02
C12orf56-201ENST00000333722 DYNLL1P63167 89 aaKnown RBP15.18■□□□□ 0.02
C12orf56-201ENST00000333722 RTN1Q16799 776 aa15.18■□□□□ 0.02
C12orf56-201ENST00000333722 TRMT1Q9NXH9 659 aaKnown RBP15.18■□□□□ 0.02
C12orf56-201ENST00000333722 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
C12orf56-201ENST00000333722 XBP1P17861 261 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 CLCN1P35523 988 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 FAM47AQ5JRC9 791 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 CEP57L1Q8IYX8 460 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 IFNL3Q8IZI9 196 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 FAM177A1Q8N128 213 aaPredicted RBP15.17■□□□□ 0.02
C12orf56-201ENST00000333722 CASP7P55210 303 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 PARP10Q53GL7 1025 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 CCDC186Q7Z3E2 898 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 SAP30BPQ9UHR5 308 aaKnown RBP15.17■□□□□ 0.02
C12orf56-201ENST00000333722 USP42Q9H9J4 1324 aaKnown RBP15.17■□□□□ 0.02
C12orf56-201ENST00000333722 SPTLC2O15270 562 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 EPB41L2O43491 1005 aaKnown RBP15.17■□□□□ 0.02
C12orf56-201ENST00000333722 SERPINC1P01008 464 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 LCORLQ8N3X6 602 aa15.17■□□□□ 0.02
C12orf56-201ENST00000333722 PPP1R1BQ9UD71 204 aaPredicted RBP15.17■□□□□ 0.02
C12orf56-201ENST00000333722 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
C12orf56-201ENST00000333722 SLC3A2P08195 630 aaKnown RBP15.16■□□□□ 0.02
C12orf56-201ENST00000333722 DHX8Q14562 1220 aaKnown RBP15.16■□□□□ 0.02
C12orf56-201ENST00000333722 HOMER1Q86YM7 354 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 NAT10Q9H0A0 1025 aaKnown RBP15.16■□□□□ 0.02
C12orf56-201ENST00000333722 PFKFB2O60825 505 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 PTF1AQ7RTS3 328 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 RIPOR2Q9Y4F9 1068 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 PALLDQ8WX93 1383 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 RPAP1Q9BWH6 1393 aaPredicted RBP15.16■□□□□ 0.02
C12orf56-201ENST00000333722 NCOA3Q9Y6Q9 1424 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 ADD2P35612 726 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
C12orf56-201ENST00000333722 JMYQ8N9B5 988 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 CLIP2Q9UDT6 1046 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 KNDC1Q76NI1 1749 aa15.16■□□□□ 0.02
C12orf56-201ENST00000333722 NFAT5O94916 1531 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 IFIT1BQ5T764 474 aaKnown RBP15.15■□□□□ 0.02
C12orf56-201ENST00000333722 AOPEPQ8N6M6 819 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 FAM200AQ8TCP9 573 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 GPR108Q9NPR9 543 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 PXDNLA1KZ92 1463 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 PTGS1P23219 599 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 CELF1Q92879 486 aaKnown RBP15.15■□□□□ 0.02
C12orf56-201ENST00000333722 UBN2Q6ZU65 1347 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 MROH5Q6ZUA9 1318 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 USP17L12C9JPN9 530 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 USP17L21D6R901 530 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 PICALMQ13492 652 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 TRAPPC3LQ5T215 181 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 OLFM4Q6UX06 510 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 TBC1D10CQ8IV04 446 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 MRPS27Q92552 414 aaKnown RBP15.15■□□□□ 0.02
C12orf56-201ENST00000333722 C16orf45Q96MC5 204 aaPredicted RBP15.15■□□□□ 0.02
C12orf56-201ENST00000333722 CLIC4Q9Y696 253 aa15.15■□□□□ 0.02
C12orf56-201ENST00000333722 ST3GAL1Q11201 340 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 LRP10Q7Z4F1 713 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 ZSCAN29Q8IWY8 852 aaPredicted RBP15.14■□□□□ 0.01
C12orf56-201ENST00000333722 CTCFLQ8NI51 663 aaPredicted RBP15.14■□□□□ 0.01
C12orf56-201ENST00000333722 RNF41Q9H4P4 317 aaPredicted RBP15.14■□□□□ 0.01
C12orf56-201ENST00000333722 OVOS2A0A0G2JMS6 1433 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 UQCRHLA0A096LP55 91 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 UQCRHP07919 91 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 LMOD1P29536 600 aaPredicted RBP15.14■□□□□ 0.01
C12orf56-201ENST00000333722 CNNM3Q8NE01 707 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 ESR2Q92731 530 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 BRMS1Q9HCU9 246 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 HIBADHP31937 336 aaKnown RBP15.14■□□□□ 0.01
C12orf56-201ENST00000333722 KRT40Q6A162 431 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 SENP2Q9HC62 589 aa15.14■□□□□ 0.01
C12orf56-201ENST00000333722 AFMP43652 599 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 FAM196AQ6ZSG2 479 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 ZKSCAN5Q9Y2L8 839 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 SYKP43405 635 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 NWD1Q149M9 1564 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 PTPN21Q16825 1174 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 CCAR2Q8N163 923 aaKnown RBP15.13■□□□□ 0.01
C12orf56-201ENST00000333722 CBX8Q9HC52 389 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 ZSWIM5Q9P217 1185 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 V9GY48 417 aaPredicted RBP15.13■□□□□ 0.01
C12orf56-201ENST00000333722 NLRP5P59047 1200 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 IKQ13123 557 aaPredicted RBP15.13■□□□□ 0.01
C12orf56-201ENST00000333722 NKX1-1Q15270 411 aaPredicted RBP15.13■□□□□ 0.01
C12orf56-201ENST00000333722 CCDC34Q96HJ3 373 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 CDCA7Q9BWT1 371 aaPredicted RBP15.13■□□□□ 0.01
C12orf56-201ENST00000333722 KRT23Q9C075 422 aa15.13■□□□□ 0.01
C12orf56-201ENST00000333722 CABP5Q9NP86 173 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms