RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
CCDC172-201ENST00000333254 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
CCDC172-201ENST00000333254 ZBTB1Q9Y2K1 713 aa12.55□□□□□ -0.4
CCDC172-201ENST00000333254 KLF18A0A0U1RQI7 1052 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 KINO60870 393 aaKnown RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 CDKL5O76039 1030 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 TRDNQ13061 729 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 IQCB1Q15051 598 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 C8orf76Q96K31 380 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 TTC12Q9H892 705 aaPredicted RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 ANO10Q9NW15 660 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 ANGEL1Q9UNK9 670 aaKnown RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 KAT6BQ8WYB5 2073 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 MYH14Q7Z406 1995 aaKnown RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 UQCRHLA0A096LP55 91 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 EXOC5O00471 708 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 RGL2O15211 777 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 UQCRHP07919 91 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 EIF5P55010 431 aaKnown RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 HSP90AA2PQ14568 343 aaPredicted RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 PARP10Q53GL7 1025 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 LUZP1Q86V48 1076 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 SGMS1Q86VZ5 419 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 LINC00301Q8NCQ3 95 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 MYRIPQ8NFW9 859 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 BPIFA3Q9BQP9 254 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 KCNF1Q9H3M0 494 aa12.54□□□□□ -0.4
CCDC172-201ENST00000333254 ORC3Q9UBD5 711 aaPredicted RBP12.54□□□□□ -0.4
CCDC172-201ENST00000333254 UBN2Q6ZU65 1347 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 STK36Q9NRP7 1315 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
CCDC172-201ENST00000333254 PDE6AP16499 860 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 RCAN1P53805 252 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 MYSM1Q5VVJ2 828 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 CPLX2Q6PUV4 134 aaKnown RBP12.53□□□□□ -0.4
CCDC172-201ENST00000333254 FMR1NBQ8N0W7 255 aaPredicted RBP12.53□□□□□ -0.4
CCDC172-201ENST00000333254 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 PDCL3Q9H2J4 239 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 GOLPH3LQ9H4A5 285 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
CCDC172-201ENST00000333254 MYH6P13533 1939 aa12.53□□□□□ -0.4
CCDC172-201ENST00000333254 CPLX1O14810 134 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 NEMFO60524 1076 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 SLC5A1P13866 664 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 GPTP24298 496 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 LIFRP42702 1097 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 FSIP1Q8NA03 581 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 DNAJC25Q9H1X3 360 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.4
CCDC172-201ENST00000333254 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.4
CCDC172-201ENST00000333254 SCN7AQ01118 1682 aa12.52□□□□□ -0.41
CCDC172-201ENST00000333254 KIAA1551Q9HCM1 1747 aa12.52□□□□□ -0.41
CCDC172-201ENST00000333254 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.41
CCDC172-201ENST00000333254 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
CCDC172-201ENST00000333254 FAM237AA0A1B0GTK4 181 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 GNAT2P19087 354 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 HAND2P61296 217 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 KIF23Q02241 960 aaPredicted RBP12.51□□□□□ -0.41
CCDC172-201ENST00000333254 DHX8Q14562 1220 aaKnown RBP12.51□□□□□ -0.41
CCDC172-201ENST00000333254 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 PI16Q6UXB8 463 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 TIGD1Q96MW7 591 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 STRBPQ96SI9 672 aaKnown RBP12.51□□□□□ -0.41
CCDC172-201ENST00000333254 NAT10Q9H0A0 1025 aaKnown RBP12.51□□□□□ -0.41
CCDC172-201ENST00000333254 CNNM2Q9H8M5 875 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 MYH13Q9UKX3 1938 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 PATL2C9JE40 543 aaKnown RBP12.51□□□□□ -0.41
CCDC172-201ENST00000333254 GOLGA6L19H0YKK7 550 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 PHKA1P46020 1223 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 ME1P48163 572 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 STK38Q15208 465 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 CHST3Q7LGC8 479 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 TBC1D10CQ8IV04 446 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 CEP57L1Q8IYX8 460 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
CCDC172-201ENST00000333254 MAST2Q6P0Q8 1798 aa12.5□□□□□ -0.41
CCDC172-201ENST00000333254 SPTLC2O15270 562 aa12.5□□□□□ -0.41
CCDC172-201ENST00000333254 PPP6R2O75170 966 aa12.5□□□□□ -0.41
CCDC172-201ENST00000333254 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
CCDC172-201ENST00000333254 MAP3K12Q12852 859 aa12.5□□□□□ -0.41
CCDC172-201ENST00000333254 SPATA5Q8NB90 893 aa12.5□□□□□ -0.41
CCDC172-201ENST00000333254 ZNF830Q96NB3 372 aaPredicted RBP12.5□□□□□ -0.41
CCDC172-201ENST00000333254 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
CCDC172-201ENST00000333254 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
CCDC172-201ENST00000333254 NAP1L2Q9ULW6 460 aaPredicted RBP12.5□□□□□ -0.41
CCDC172-201ENST00000333254 NEDD4P46934 1319 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms