RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 KIF2AO00139 706 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PDIA3P30101 505 aaKnown RBP11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ARID5AQ03989 594 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CCDC150Q8NCX0 1101 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ABCC3O15438 1527 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ARAP3Q8WWN8 1544 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MYO1BO43795 1136 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PFKFB1P16118 471 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TOB2Q14106 344 aaPredicted RBP11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 BLZF1Q9H2G9 400 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 JADE2Q9NQC1 790 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TMEM2Q9UHN6 1383 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 KCNQ4P56696 695 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MYL5Q02045 173 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 WASF1Q92558 559 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ARFGAP3Q9NP61 516 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 V9GY48 417 aaPredicted RBP11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TSPOAP1O95153 1857 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TULP4Q9NRJ4 1543 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 HECW2Q9P2P5 1572 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SF3A3Q12874 501 aaKnown RBP eCLIP11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CATIPQ7Z7H3 387 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SMYD4Q8IYR2 804 aaPredicted RBP11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 NSUN7Q8NE18 718 aaKnown RBP11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TTC14Q96N46 770 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 VPS54Q9P1Q0 977 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
CSGALNACT1-201ENST00000332246 AOX1Q06278 1338 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CCDC194A0A1B0GVG4 234 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 UBA7P41226 1012 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MTIF2P46199 727 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 RNASE9P60153 205 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PTPN12Q05209 780 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TDRD12Q587J7 1177 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SPTY2D1Q68D10 685 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 DCAF5Q96JK2 942 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 BAG1Q99933 345 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SEPT11Q9NVA2 429 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ZNF532Q9HCE3 1301 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 F8W031 263 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ERLIN1O75477 346 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SEC31AO94979 1220 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CDC25AP30304 524 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CCDC178Q5BJE1 867 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CEP89Q96ST8 783 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 WWC3Q9ULE0 1092 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CAVIN2O95810 425 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CASP1P29466 404 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 STIM1Q13586 685 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 POLA2Q14181 598 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SOGA3Q5TF21 947 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SDR42E1Q8WUS8 393 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 BBXQ8WY36 941 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TMX4Q9H1E5 349 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 NIP7Q9Y221 180 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 POLR1AO95602 1720 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PNPLA6Q8IY17 1366 aa11.22□□□□□ -0.61
CSGALNACT1-201ENST00000332246 IFIT1BQ5T764 474 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SMAP1Q8IYB5 467 aaPredicted RBP11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TRIM47Q96LD4 638 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CRACR2AQ9BSW2 395 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ACBD3Q9H3P7 528 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 OGFRQ9NZT2 677 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 VPS18Q9P253 973 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SERTAD1Q9UHV2 236 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ANGEL1Q9UNK9 670 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 KIF24Q5T7B8 1368 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 RNF17Q9BXT8 1623 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 C10orf67Q8IYJ2 551 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 KCNF1Q9H3M0 494 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ARHGEF10O15013 1369 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SHROOM2Q13796 1616 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 AATKQ6ZMQ8 1374 aa11.21□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SPHKAPQ2M3C7 1700 aa11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 NLRP1Q9C000 1473 aa11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 M0R2C6 588 aa11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 ZFYVE27Q5T4F4 411 aa11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 DZIP3Q86Y13 1208 aaKnown RBP11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 PUS7LQ9H0K6 701 aaKnown RBP11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 RSPH14Q9UHP6 348 aa11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 CEP131Q9UPN4 1083 aa11.21□□□□□ -0.62
CSGALNACT1-201ENST00000332246 TRIM75PA6NK02 468 aa11.2□□□□□ -0.62
CSGALNACT1-201ENST00000332246 EXOC5O00471 708 aa11.2□□□□□ -0.62
CSGALNACT1-201ENST00000332246 AP5Z1O43299 807 aa11.2□□□□□ -0.62
CSGALNACT1-201ENST00000332246 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
CSGALNACT1-201ENST00000332246 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms