RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RAD50Q92878 1312 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 PDE6BP35913 854 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 PKP1Q13835 747 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 SYNE3Q6ZMZ3 975 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 LARGE2Q8N3Y3 721 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 MKNK2Q9HBH9 465 aa18.73■□□□□ 0.59
PDGFB-201ENST00000331163 TULP1O00294 542 aaPredicted RBP18.73■□□□□ 0.59
PDGFB-201ENST00000331163 GOLGA6L4A6NEF3 574 aa18.72■□□□□ 0.59
PDGFB-201ENST00000331163 IFIT3O14879 490 aaKnown RBP18.72■□□□□ 0.59
PDGFB-201ENST00000331163 ONECUT3O60422 494 aaPredicted RBP18.72■□□□□ 0.59
PDGFB-201ENST00000331163 EIF6P56537 245 aaKnown RBP18.72■□□□□ 0.59
PDGFB-201ENST00000331163 FIBPO43427 364 aa18.72■□□□□ 0.59
PDGFB-201ENST00000331163 CYP21A2P08686 494 aa18.72■□□□□ 0.59
PDGFB-201ENST00000331163 RBM25P49756 843 aaKnown RBP18.72■□□□□ 0.59
PDGFB-201ENST00000331163 COL9A3Q14050 684 aaPredicted RBP18.72■□□□□ 0.59
PDGFB-201ENST00000331163 LCORLQ8N3X6 602 aa18.72■□□□□ 0.59
PDGFB-201ENST00000331163 CTNNA3Q9UI47 895 aa18.72■□□□□ 0.59
PDGFB-201ENST00000331163 PARP4Q9UKK3 1724 aaKnown RBP18.72■□□□□ 0.59
PDGFB-201ENST00000331163 ADRA2BP18089 450 aa18.72■□□□□ 0.59
PDGFB-201ENST00000331163 NASPP49321 788 aaPredicted RBP18.72■□□□□ 0.59
PDGFB-201ENST00000331163 TGFBRAP1Q8WUH2 860 aa18.72■□□□□ 0.59
PDGFB-201ENST00000331163 UBAC1Q9BSL1 405 aa18.72■□□□□ 0.59
PDGFB-201ENST00000331163 PXDNLA1KZ92 1463 aa18.71■□□□□ 0.59
PDGFB-201ENST00000331163 STX8Q9UNK0 236 aa18.71■□□□□ 0.59
PDGFB-201ENST00000331163 CMTR1Q8N1G2 835 aaKnown RBP18.71■□□□□ 0.59
PDGFB-201ENST00000331163 VEZTQ9HBM0 779 aa18.71■□□□□ 0.59
PDGFB-201ENST00000331163 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
PDGFB-201ENST00000331163 UBE4AQ14139 1066 aa18.7■□□□□ 0.58
PDGFB-201ENST00000331163 FLAD1Q8NFF5 587 aa18.7■□□□□ 0.58
PDGFB-201ENST00000331163 PLA2G12BQ9BX93 195 aa18.7■□□□□ 0.58
PDGFB-201ENST00000331163 hCG_1642624A0A1W2PR95 340 aa18.7■□□□□ 0.58
PDGFB-201ENST00000331163 TTF2Q9UNY4 1162 aaKnown RBP18.7■□□□□ 0.58
PDGFB-201ENST00000331163 SCN11AQ9UI33 1791 aa18.7■□□□□ 0.58
PDGFB-201ENST00000331163 SF3B3Q15393 1217 aaKnown RBP18.7■□□□□ 0.58
PDGFB-201ENST00000331163 ZNF277Q9NRM2 450 aaPredicted RBP18.7■□□□□ 0.58
PDGFB-201ENST00000331163 XDHP47989 1333 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 POLRMTO00411 1230 aaKnown RBP18.69■□□□□ 0.58
PDGFB-201ENST00000331163 HSPA4P34932 840 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 AOC3Q16853 763 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 LARP1BQ659C4 914 aaKnown RBP18.69■□□□□ 0.58
PDGFB-201ENST00000331163 MFSD6Q6ZSS7 791 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 LIMCH1Q9UPQ0 1083 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 GOLGA8BA8MQT2 603 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 USP17L12C9JPN9 530 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 USP17L21D6R901 530 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 ZFYP08048 801 aaPredicted RBP18.69■□□□□ 0.58
PDGFB-201ENST00000331163 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 AOX1Q06278 1338 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 ATRNO75882 1429 aa18.69■□□□□ 0.58
PDGFB-201ENST00000331163 SALL3Q9BXA9 1300 aa18.68■□□□□ 0.58
PDGFB-201ENST00000331163 KLF18A0A0U1RQI7 1052 aa18.68■□□□□ 0.58
PDGFB-201ENST00000331163 SMIM22K7EJ46 135 aa18.68■□□□□ 0.58
PDGFB-201ENST00000331163 ALDH1B1P30837 517 aa18.68■□□□□ 0.58
PDGFB-201ENST00000331163 PRPF40AO75400 957 aaKnown RBP18.68■□□□□ 0.58
PDGFB-201ENST00000331163 KCNQ5Q9NR82 932 aa18.68■□□□□ 0.58
PDGFB-201ENST00000331163 PRC1O43663 620 aa18.68■□□□□ 0.58
PDGFB-201ENST00000331163 IKQ13123 557 aaPredicted RBP18.68■□□□□ 0.58
PDGFB-201ENST00000331163 TMEM67Q5HYA8 995 aa18.68■□□□□ 0.58
PDGFB-201ENST00000331163 CCDC69A6NI79 296 aa18.67■□□□□ 0.58
PDGFB-201ENST00000331163 TSPY2A6NKD2 308 aa18.67■□□□□ 0.58
PDGFB-201ENST00000331163 PLSCR1O15162 318 aa18.67■□□□□ 0.58
PDGFB-201ENST00000331163 MECOMQ03112 1051 aa18.67■□□□□ 0.58
PDGFB-201ENST00000331163 PNPLA7Q6ZV29 1317 aa18.67■□□□□ 0.58
PDGFB-201ENST00000331163 ZMYM1Q5SVZ6 1142 aa18.67■□□□□ 0.58
PDGFB-201ENST00000331163 LARGE1O95461 756 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 KIF2CQ99661 725 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 VAT1LQ9HCJ6 419 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 TFIP11Q9UBB9 837 aaKnown RBP18.66■□□□□ 0.58
PDGFB-201ENST00000331163 AKAP17AQ02040 695 aaKnown RBP18.66■□□□□ 0.58
PDGFB-201ENST00000331163 OTUD7BQ6GQQ9 843 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 CAVIN1Q6NZI2 390 aaKnown RBP18.66■□□□□ 0.58
PDGFB-201ENST00000331163 CRACR2BQ8N4Y2 399 aaPredicted RBP18.66■□□□□ 0.58
PDGFB-201ENST00000331163 POLLQ9UGP5 575 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 TEX11Q8IYF3 940 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 BRIP1Q9BX63 1249 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 GPR108Q9NPR9 543 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 C5P01031 1676 aa18.66■□□□□ 0.58
PDGFB-201ENST00000331163 PLCH1Q4KWH8 1693 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 E7EWF7 191 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 BBOX1O75936 387 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 GJB2P29033 226 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 ADD2P35612 726 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 PRKG1Q13976 671 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 CRNKL1Q9BZJ0 848 aaKnown RBP18.65■□□□□ 0.58
PDGFB-201ENST00000331163 HELLSQ9NRZ9 838 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 CLRN2A0PK11 232 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 FAM196BA6NMK8 535 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 SART3Q15020 963 aaKnown RBP18.65■□□□□ 0.58
PDGFB-201ENST00000331163 RUFY3Q7L099 469 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 MAP4K1Q92918 833 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 DOT1LQ8TEK3 1739 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 CYP2D6P10635 497 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 KRT32Q14532 448 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 NCOA7Q8NI08 942 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 CD209Q9NNX6 404 aa18.65■□□□□ 0.58
PDGFB-201ENST00000331163 ZBTB12Q9Y330 459 aaPredicted RBP18.65■□□□□ 0.58
PDGFB-201ENST00000331163 JAK2O60674 1132 aa18.64■□□□□ 0.57
PDGFB-201ENST00000331163 DPEP1P16444 411 aa18.64■□□□□ 0.57
PDGFB-201ENST00000331163 MASTLQ96GX5 879 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms