RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 NOM1Q5C9Z4 860 aaKnown RBP22.6■■□□□ 1.21
RAB28-202ENST00000330852 SPRYD7Q5W111 196 aa22.6■■□□□ 1.21
RAB28-202ENST00000330852 MAST3O60307 1309 aa22.6■■□□□ 1.21
RAB28-202ENST00000330852 IREB2P48200 963 aaKnown RBP22.6■■□□□ 1.21
RAB28-202ENST00000330852 TNNI2P48788 182 aa22.6■■□□□ 1.21
RAB28-202ENST00000330852 CHAF1AQ13111 956 aaPredicted RBP22.6■■□□□ 1.21
RAB28-202ENST00000330852 IQSEC3Q9UPP2 1182 aaPredicted RBP22.6■■□□□ 1.21
RAB28-202ENST00000330852 IPO8O15397 1037 aaKnown RBP22.59■■□□□ 1.21
RAB28-202ENST00000330852 ZBTB48P10074 688 aaPredicted RBP22.59■■□□□ 1.21
RAB28-202ENST00000330852 INTS3Q68E01 1043 aaKnown RBP22.59■■□□□ 1.21
RAB28-202ENST00000330852 ATG9AQ7Z3C6 839 aa22.59■■□□□ 1.21
RAB28-202ENST00000330852 TEKT1Q969V4 418 aa22.59■■□□□ 1.21
RAB28-202ENST00000330852 TDRD3Q9H7E2 651 aaKnown RBP22.59■■□□□ 1.21
RAB28-202ENST00000330852 SSC5DA1L4H1 1573 aa22.59■■□□□ 1.21
RAB28-202ENST00000330852 NBPF12Q5TAG4 269 aaPredicted RBP22.58■■□□□ 1.21
RAB28-202ENST00000330852 CFHR5Q9BXR6 569 aa22.58■■□□□ 1.21
RAB28-202ENST00000330852 CEP126Q9P2H0 1117 aa22.58■■□□□ 1.21
RAB28-202ENST00000330852 AOX1Q06278 1338 aa22.57■■□□□ 1.2
RAB28-202ENST00000330852 MANSC4A6NHS7 340 aaPredicted RBP22.57■■□□□ 1.2
RAB28-202ENST00000330852 CCDC85CA6NKD9 419 aa22.57■■□□□ 1.2
RAB28-202ENST00000330852 ALDH1A1P00352 501 aa22.57■■□□□ 1.2
RAB28-202ENST00000330852 GNAI3P08754 354 aa22.57■■□□□ 1.2
RAB28-202ENST00000330852 WDR66Q8TBY9 1149 aa22.57■■□□□ 1.2
RAB28-202ENST00000330852 IL15P40933 162 aaPredicted RBP22.57■■□□□ 1.2
RAB28-202ENST00000330852 LRRFIP2Q9Y608 721 aaKnown RBP22.57■■□□□ 1.2
RAB28-202ENST00000330852 ZBTB22O15209 634 aa22.56■■□□□ 1.2
RAB28-202ENST00000330852 USP2O75604 605 aaPredicted RBP22.56■■□□□ 1.2
RAB28-202ENST00000330852 ANKRD13AQ8IZ07 590 aa22.56■■□□□ 1.2
RAB28-202ENST00000330852 ZDHHC15Q96MV8 337 aa22.56■■□□□ 1.2
RAB28-202ENST00000330852 COPRSQ9NQ92 184 aa22.56■■□□□ 1.2
RAB28-202ENST00000330852 GNL3LQ9NVN8 582 aaKnown RBP22.56■■□□□ 1.2
RAB28-202ENST00000330852 FKBP1CQ5VVH2 108 aa22.55■■□□□ 1.2
RAB28-202ENST00000330852 HHIPL2Q6UWX4 724 aa22.55■■□□□ 1.2
RAB28-202ENST00000330852 MKRN3Q13064 507 aaKnown RBP22.54■■□□□ 1.2
RAB28-202ENST00000330852 GRIK5Q16478 980 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 ATP2B3Q16720 1220 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 CTU1Q7Z7A3 348 aaKnown RBP22.54■■□□□ 1.2
RAB28-202ENST00000330852 WNK4Q96J92 1243 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 MEIS3Q99687 375 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 RGS19P49795 217 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 TEPSINQ96N21 525 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 SIL1Q9H173 461 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 TMOD2Q9NZR1 351 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 FZD1Q9UP38 647 aa22.54■■□□□ 1.2
RAB28-202ENST00000330852 SEMA3EO15041 775 aa22.53■■□□□ 1.2
RAB28-202ENST00000330852 PKN2Q16513 984 aaKnown RBP22.53■■□□□ 1.2
RAB28-202ENST00000330852 CLMNQ96JQ2 1002 aa22.53■■□□□ 1.2
RAB28-202ENST00000330852 TCP10L2B9ZVM9 353 aa22.52■■□□□ 1.2
RAB28-202ENST00000330852 TBC1D8O95759 1140 aa22.52■■□□□ 1.2
RAB28-202ENST00000330852 MTX1Q13505 466 aa22.52■■□□□ 1.2
RAB28-202ENST00000330852 FAM83AQ86UY5 434 aa22.52■■□□□ 1.2
RAB28-202ENST00000330852 HOOK2Q96ED9 719 aa22.52■■□□□ 1.2
RAB28-202ENST00000330852 ATF7IPQ6VMQ6 1270 aa22.51■■□□□ 1.19
RAB28-202ENST00000330852 OTOFQ9HC10 1997 aa22.51■■□□□ 1.19
RAB28-202ENST00000330852 GPR25O00155 361 aa22.51■■□□□ 1.19
RAB28-202ENST00000330852 ZNF296Q8WUU4 475 aaPredicted RBP22.51■■□□□ 1.19
RAB28-202ENST00000330852 OTUD7BQ6GQQ9 843 aa22.5■■□□□ 1.19
RAB28-202ENST00000330852 APOBEC3HQ6NTF7 200 aaKnown RBP22.5■■□□□ 1.19
RAB28-202ENST00000330852 IFNL1Q8IU54 200 aa22.5■■□□□ 1.19
RAB28-202ENST00000330852 TMEM39BQ9GZU3 492 aa22.5■■□□□ 1.19
RAB28-202ENST00000330852 DENND2AQ9ULE3 1009 aa22.5■■□□□ 1.19
RAB28-202ENST00000330852 TRIM27P14373 513 aa22.49■■□□□ 1.19
RAB28-202ENST00000330852 SALL1Q9NSC2 1324 aa22.49■■□□□ 1.19
RAB28-202ENST00000330852 PA2G4Q9UQ80 394 aaKnown RBP22.48■■□□□ 1.19
RAB28-202ENST00000330852 SRGAP3O43295 1099 aa22.48■■□□□ 1.19
RAB28-202ENST00000330852 MAP3K9P80192 1104 aa22.48■■□□□ 1.19
RAB28-202ENST00000330852 ZGPATQ8N5A5 531 aaKnown RBP22.48■■□□□ 1.19
RAB28-202ENST00000330852 AKAP2Q9Y2D5 859 aa22.48■■□□□ 1.19
RAB28-202ENST00000330852 RPAP1Q9BWH6 1393 aaPredicted RBP22.47■■□□□ 1.19
RAB28-202ENST00000330852 TESPA1A2RU30 521 aaPredicted RBP22.47■■□□□ 1.19
RAB28-202ENST00000330852 FKTNO75072 461 aa22.47■■□□□ 1.19
RAB28-202ENST00000330852 CSADQ9Y600 493 aa22.47■■□□□ 1.19
RAB28-202ENST00000330852 GNAI2P04899 355 aa22.46■■□□□ 1.19
RAB28-202ENST00000330852 LDHBP07195 334 aaKnown RBP22.46■■□□□ 1.19
RAB28-202ENST00000330852 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.46■■□□□ 1.19
RAB28-202ENST00000330852 FRAT1Q92837 279 aaPredicted RBP22.46■■□□□ 1.19
RAB28-202ENST00000330852 AK9Q5TCS8 1911 aa22.46■■□□□ 1.19
RAB28-202ENST00000330852 BCAR3O75815 825 aa22.45■■□□□ 1.19
RAB28-202ENST00000330852 MLLT1Q03111 559 aaPredicted RBP22.45■■□□□ 1.19
RAB28-202ENST00000330852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.45■■□□□ 1.192e-7■□□□□ 9.2
RAB28-202ENST00000330852 PDS5AQ29RF7 1337 aaKnown RBP22.45■■□□□ 1.19
RAB28-202ENST00000330852 PHKA1P46020 1223 aa22.45■■□□□ 1.18
RAB28-202ENST00000330852 DCAF15Q66K64 600 aa22.45■■□□□ 1.18
RAB28-202ENST00000330852 DIEXFQ68CQ4 756 aaKnown RBP22.45■■□□□ 1.18
RAB28-202ENST00000330852 CDAN1Q8IWY9 1227 aa22.45■■□□□ 1.18
RAB28-202ENST00000330852 OPTNQ96CV9 577 aa22.45■■□□□ 1.18
RAB28-202ENST00000330852 ELP3Q9H9T3 547 aa22.45■■□□□ 1.18
RAB28-202ENST00000330852 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.45■■□□□ 1.18
RAB28-202ENST00000330852 MYH2Q9UKX2 1941 aa22.44■■□□□ 1.18
RAB28-202ENST00000330852 GJA5P36382 358 aa22.44■■□□□ 1.18
RAB28-202ENST00000330852 CACNB3P54284 484 aa22.44■■□□□ 1.18
RAB28-202ENST00000330852 HNRNPUQ00839 825 aaKnown RBP eCLIP22.44■■□□□ 1.18
RAB28-202ENST00000330852 ZKSCAN2Q63HK3 967 aa22.44■■□□□ 1.18
RAB28-202ENST00000330852 CCDC102BQ68D86 513 aa22.44■■□□□ 1.18
RAB28-202ENST00000330852 MIER1Q8N108 512 aa22.44■■□□□ 1.18
RAB28-202ENST00000330852 IGF2BP3O00425 579 aaKnown RBP eCLIP22.43■■□□□ 1.18
RAB28-202ENST00000330852 FAM151AQ8WW52 585 aa22.43■■□□□ 1.18
RAB28-202ENST00000330852 DAGLAQ9Y4D2 1042 aa22.43■■□□□ 1.18
RAB28-202ENST00000330852 PRDX5P30044 214 aa22.43■■□□□ 1.18
RAB28-202ENST00000330852 VGLL4Q14135 290 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms