RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 GTF2E1P29083 439 aaPredicted RBP8.18□□□□□ -1.1
SMG1-201ENST00000330588 PROSER3Q2NL68 480 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 COPS6Q7L5N1 327 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 XAGE3Q8WTP9 111 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 PSMD1Q99460 953 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 UTP14AQ9BVJ6 771 aaKnown RBP8.18□□□□□ -1.1
SMG1-201ENST00000330588 VPS33BQ9H267 617 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 TAOK3Q9H2K8 898 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 ZBTB3Q9H5J0 574 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 MRS2Q9HD23 443 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 WWC3Q9ULE0 1092 aa8.18□□□□□ -1.1
SMG1-201ENST00000330588 CACNA1SQ13698 1873 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 CCDC88AQ3V6T2 1871 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 CACNA1FO60840 1977 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 GLTPD2A6NH11 291 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 F12P00748 615 aaPredicted RBP8.17□□□□□ -1.1
SMG1-201ENST00000330588 HSP90B1P14625 803 aaKnown RBP8.17□□□□□ -1.1
SMG1-201ENST00000330588 FKBP4Q02790 459 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMG1-201ENST00000330588 CCDC30Q5VVM6 783 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 SUSD4Q5VX71 490 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 TMC4Q7Z404 712 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 WDR63Q8IWG1 891 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 WWC1Q8IX03 1113 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 NPAS3Q8IXF0 933 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 CHPF2Q9P2E5 772 aa8.17□□□□□ -1.1
SMG1-201ENST00000330588 NXF1Q9UBU9 619 aaKnown RBP8.17□□□□□ -1.1
SMG1-201ENST00000330588 C21orf2O43822 256 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 RASSF7Q02833 373 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 FSTL1Q12841 308 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 ERFEQ4G0M1 354 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 CCDC184Q52MB2 194 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 PRPF38BQ5VTL8 546 aaKnown RBP8.16□□□□□ -1.1
SMG1-201ENST00000330588 NLRP10Q86W26 655 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 RPGRQ92834 1020 aaKnown RBP8.16□□□□□ -1.1
SMG1-201ENST00000330588 RBM17Q96I25 401 aaKnown RBP8.16□□□□□ -1.1
SMG1-201ENST00000330588 NLRP3Q96P20 1036 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 ISCA1Q9BUE6 129 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 LAS1LQ9Y4W2 734 aaKnown RBP8.16□□□□□ -1.1
SMG1-201ENST00000330588 SH3TC1Q8TE82 1336 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 LRRC37AA6NMS7 1700 aa8.16□□□□□ -1.1
SMG1-201ENST00000330588 PRELPP51888 382 aa8.15□□□□□ -1.1
SMG1-201ENST00000330588 NNTQ13423 1086 aa8.15□□□□□ -1.1
SMG1-201ENST00000330588 KRT24Q2M2I5 525 aa8.15□□□□□ -1.1
SMG1-201ENST00000330588 KLF16Q9BXK1 252 aaPredicted RBP8.15□□□□□ -1.1
SMG1-201ENST00000330588 DDX60Q8IY21 1712 aaKnown RBP8.15□□□□□ -1.1
SMG1-201ENST00000330588 SCN4AP35499 1836 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 DDX58O95786 925 aaKnown RBP8.14□□□□□ -1.11
SMG1-201ENST00000330588 HSPA6P17066 643 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 GPTP24298 496 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 EIF5BO60841 1220 aaKnown RBP8.14□□□□□ -1.11
SMG1-201ENST00000330588 BBOX1O75936 387 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 ANXA1P04083 346 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 VEGFAP15692 232 aaPredicted RBP8.14□□□□□ -1.11
SMG1-201ENST00000330588 TIMP2P16035 220 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 SF3B3Q15393 1217 aaKnown RBP8.14□□□□□ -1.11
SMG1-201ENST00000330588 RIC3Q7Z5B4 369 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 CCDC191Q8NCU4 936 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 ZFP42Q96MM3 310 aa8.14□□□□□ -1.11
SMG1-201ENST00000330588 TRMT112Q9UI30 125 aaKnown RBP8.14□□□□□ -1.11
SMG1-201ENST00000330588 FZD9O00144 591 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 IARSP41252 1262 aaKnown RBP8.13□□□□□ -1.11
SMG1-201ENST00000330588 AIMP1Q12904 312 aaKnown RBP8.13□□□□□ -1.11
SMG1-201ENST00000330588 TUSC1Q2TAM9 212 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 C16orf71Q8IYS4 520 aaPredicted RBP8.13□□□□□ -1.11
SMG1-201ENST00000330588 ZBTB38Q8NAP3 1195 aaPredicted RBP8.13□□□□□ -1.11
SMG1-201ENST00000330588 C8orf58Q8NAV2 365 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 SUPT20HQ8NEM7 779 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 FAM174AQ8TBP5 190 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 ZNF526Q8TF50 670 aaPredicted RBP8.13□□□□□ -1.11
SMG1-201ENST00000330588 STK31Q9BXU1 1019 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 RTFDC1Q9BY42 306 aaPredicted RBP8.13□□□□□ -1.11
SMG1-201ENST00000330588 NMRK2Q9NPI5 230 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 MAP10Q9P2G4 905 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 ATP6V0A2Q9Y487 856 aa8.13□□□□□ -1.11
SMG1-201ENST00000330588 SENP3-EIF4A1A0A087X0R7 540 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 IQCA1LA6NCM1 817 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 FAM177BA6PVY3 158 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 H3BM21 787 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 ADH1CP00326 375 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 LORP23490 312 aaPredicted RBP8.12□□□□□ -1.11
SMG1-201ENST00000330588 CTHP32929 405 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 TWISTNBQ3B726 338 aaPredicted RBP8.12□□□□□ -1.11
SMG1-201ENST00000330588 SP8Q8IXZ3 490 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 SMC1BQ8NDV3 1235 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 FOXJ1Q92949 421 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 METTL22Q9BUU2 404 aaPredicted RBP8.12□□□□□ -1.11
SMG1-201ENST00000330588 TMX4Q9H1E5 349 aaPredicted RBP8.12□□□□□ -1.11
SMG1-201ENST00000330588 GOPCQ9HD26 462 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 CDHR2Q9BYE9 1310 aa8.12□□□□□ -1.11
SMG1-201ENST00000330588 PCCAP05165 728 aaPredicted RBP8.11□□□□□ -1.11
SMG1-201ENST00000330588 GRAPQ13588 217 aa8.11□□□□□ -1.11
SMG1-201ENST00000330588 MRPL14Q6P1L8 145 aaKnown RBP8.11□□□□□ -1.11
SMG1-201ENST00000330588 KSR2Q6VAB6 950 aa8.11□□□□□ -1.11
SMG1-201ENST00000330588 DDX46Q7L014 1031 aaKnown RBP8.11□□□□□ -1.11
SMG1-201ENST00000330588 GRAPLQ8TC17 118 aaPredicted RBP8.11□□□□□ -1.11
SMG1-201ENST00000330588 MYH16Q9H6N6 1097 aa8.11□□□□□ -1.11
SMG1-201ENST00000330588 ABCC4O15439 1325 aa8.11□□□□□ -1.11
SMG1-201ENST00000330588 ZNF521Q96K83 1311 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms