RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 TMEM39BQ9GZU3 492 aa11.95□□□□□ -0.5
GDF3-201ENST00000329913 TDRD3Q9H7E2 651 aaKnown RBP11.95□□□□□ -0.5
GDF3-201ENST00000329913 CNNM1Q9NRU3 951 aa11.95□□□□□ -0.5
GDF3-201ENST00000329913 ZSWIM8A7E2V4 1837 aa11.95□□□□□ -0.5
GDF3-201ENST00000329913 PPP1R12BO60237 982 aaPredicted RBP11.94□□□□□ -0.5
GDF3-201ENST00000329913 IL1R1P14778 569 aa11.94□□□□□ -0.5
GDF3-201ENST00000329913 EN2P19622 333 aaPredicted RBP11.94□□□□□ -0.5
GDF3-201ENST00000329913 CHAF1AQ13111 956 aaPredicted RBP11.94□□□□□ -0.5
GDF3-201ENST00000329913 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
GDF3-201ENST00000329913 OPTNQ96CV9 577 aa11.94□□□□□ -0.5
GDF3-201ENST00000329913 VAMP4O75379 141 aa11.93□□□□□ -0.5
GDF3-201ENST00000329913 MFSD14BQ5SR56 506 aa11.93□□□□□ -0.5
GDF3-201ENST00000329913 BEND3Q5T5X7 828 aa11.93□□□□□ -0.5
GDF3-201ENST00000329913 LDHAL6AQ6ZMR3 332 aa11.93□□□□□ -0.5
GDF3-201ENST00000329913 ZNF70Q9UC06 446 aaPredicted RBP11.93□□□□□ -0.5
GDF3-201ENST00000329913 TTF2Q9UNY4 1162 aaKnown RBP11.93□□□□□ -0.5
GDF3-201ENST00000329913 PTPN22Q9Y2R2 807 aa11.93□□□□□ -0.5
GDF3-201ENST00000329913 COL1A1P02452 1464 aaPredicted RBP11.93□□□□□ -0.5
GDF3-201ENST00000329913 ECM29Q5VYK3 1845 aa11.93□□□□□ -0.5
GDF3-201ENST00000329913 MYO1BO43795 1136 aa11.92□□□□□ -0.5
GDF3-201ENST00000329913 IREB2P48200 963 aaKnown RBP11.92□□□□□ -0.5
GDF3-201ENST00000329913 MAP3K11Q16584 847 aa11.92□□□□□ -0.5
GDF3-201ENST00000329913 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
GDF3-201ENST00000329913 BRI3BPQ8WY22 251 aa11.92□□□□□ -0.5
GDF3-201ENST00000329913 SUCLG2Q96I99 432 aa11.92□□□□□ -0.5
GDF3-201ENST00000329913 CFHR5Q9BXR6 569 aa11.92□□□□□ -0.5
GDF3-201ENST00000329913 ARHGAP39Q9C0H5 1083 aa11.92□□□□□ -0.5
GDF3-201ENST00000329913 EFCC1Q9HA90 598 aa11.92□□□□□ -0.5
GDF3-201ENST00000329913 KIAA0100Q14667 2235 aaKnown RBP11.92□□□□□ -0.5
GDF3-201ENST00000329913 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 ZBTB48P10074 688 aaPredicted RBP11.91□□□□□ -0.5
GDF3-201ENST00000329913 VGLL4Q14135 290 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 CCDC57Q2TAC2 916 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 SUPT20HL1Q3ZLR7 823 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 NOM1Q5C9Z4 860 aaKnown RBP11.91□□□□□ -0.5
GDF3-201ENST00000329913 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.91□□□□□ -0.5
GDF3-201ENST00000329913 FAM43AQ8N2R8 423 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 KLHDC4Q8TBB5 520 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 MRS2Q9HD23 443 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 PTCH2Q9Y6C5 1203 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 SZT2Q5T011 3432 aa11.91□□□□□ -0.5
GDF3-201ENST00000329913 CCL15-CCL14A0A0B4J2E2 113 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 GRM8O00222 908 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 CRKP46108 304 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 SP3Q02447 781 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 CCL15Q16663 113 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 CCDC27Q2M243 656 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 LRRC24Q50LG9 513 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 HABP4Q5JVS0 413 aaKnown RBP11.9□□□□□ -0.5
GDF3-201ENST00000329913 C15orf52Q6ZUT6 534 aaKnown RBP11.9□□□□□ -0.5
GDF3-201ENST00000329913 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
GDF3-201ENST00000329913 ANKRD13AQ8IZ07 590 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 ERO1AQ96HE7 468 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 KAZALD1Q96I82 304 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 TEPSINQ96N21 525 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 PPP2R3BQ9Y5P8 575 aa11.9□□□□□ -0.5
GDF3-201ENST00000329913 CEP290O15078 2479 aa11.89□□□□□ -0.51
GDF3-201ENST00000329913 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
GDF3-201ENST00000329913 HIBADHP31937 336 aaKnown RBP11.89□□□□□ -0.51
GDF3-201ENST00000329913 TAF1CQ15572 869 aaPredicted RBP11.89□□□□□ -0.51
GDF3-201ENST00000329913 TDRD7Q8NHU6 1098 aaKnown RBP11.89□□□□□ -0.51
GDF3-201ENST00000329913 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
GDF3-201ENST00000329913 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
GDF3-201ENST00000329913 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
GDF3-201ENST00000329913 C9orf78Q9NZ63 289 aaPredicted RBP11.89□□□□□ -0.51
GDF3-201ENST00000329913 IL16Q14005 1332 aa11.88□□□□□ -0.51
GDF3-201ENST00000329913 FAM205AQ6ZU69 1335 aa11.88□□□□□ -0.51
GDF3-201ENST00000329913 RANBP2P49792 3224 aaKnown RBP11.88□□□□□ -0.51
GDF3-201ENST00000329913 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
GDF3-201ENST00000329913 ZKSCAN4Q969J2 545 aaPredicted RBP11.88□□□□□ -0.51
GDF3-201ENST00000329913 ARAP2Q8WZ64 1704 aa11.88□□□□□ -0.51
GDF3-201ENST00000329913 BCAMP50895 628 aa11.87□□□□□ -0.51
GDF3-201ENST00000329913 INHBEP58166 350 aa11.87□□□□□ -0.51
GDF3-201ENST00000329913 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.87□□□□□ -0.51
GDF3-201ENST00000329913 ARMC5Q96C12 935 aa11.87□□□□□ -0.51
GDF3-201ENST00000329913 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
GDF3-201ENST00000329913 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
GDF3-201ENST00000329913 SNCAIPQ9Y6H5 919 aa11.87□□□□□ -0.51
GDF3-201ENST00000329913 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
GDF3-201ENST00000329913 FRAT2O75474 233 aaPredicted RBP11.86□□□□□ -0.51
GDF3-201ENST00000329913 MMP14P50281 582 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 FKBP1AP62942 108 aaKnown RBP11.86□□□□□ -0.51
GDF3-201ENST00000329913 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 SLC4A8Q2Y0W8 1093 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 METTL24Q5JXM2 366 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 OTUD7BQ6GQQ9 843 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 MIGA2Q7L4E1 593 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 VPS37DQ86XT2 251 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 ANKRD44Q8N8A2 993 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 ZNF333Q96JL9 665 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 WRNIP1Q96S55 665 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 SRCIN1Q9C0H9 1055 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 LAMB1P07942 1786 aa11.86□□□□□ -0.51
GDF3-201ENST00000329913 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
GDF3-201ENST00000329913 SLURP2P0DP57 97 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms